BLASTX nr result

ID: Coptis24_contig00011172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011172
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518375.1| ring finger protein, putative [Ricinus commu...   131   7e-29
emb|CBI20233.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264...   127   9e-28
ref|XP_003526011.1| PREDICTED: uncharacterized protein LOC100779...   125   3e-27
ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26

>ref|XP_002518375.1| ring finger protein, putative [Ricinus communis]
           gi|223542470|gb|EEF44011.1| ring finger protein,
           putative [Ricinus communis]
          Length = 549

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/98 (64%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
 Frame = +1

Query: 1   EELLALGEQIGSVITGLPEETILRHLKTRVYISSASKDMNNEV-----ETGTCIVCQVEY 165
           EELLALGE+IGSV TGL EETI   LKTR Y+SS       E+     E G+CI+CQ EY
Sbjct: 445 EELLALGERIGSVNTGLSEETIRSQLKTRKYLSSPMSINLEEITCMDQELGSCIICQDEY 504

Query: 166 RNQEKVGTLGCGHEYHADCIKKWLQVKNVCPICKVQAI 279
           +++EK+GTL CGHEYHADC+KKWL+VKNVCPICK +A+
Sbjct: 505 KSKEKIGTLDCGHEYHADCLKKWLRVKNVCPICKSEAL 542


>emb|CBI20233.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   EELLALGEQIGSVITGLPEETILRHLKTRVYISSASKDMNN----EVETGTCIVCQVEYR 168
           EELLALGE+IG V TGL EE+I   LKTR YISS   ++      ++E  +CI+CQ EYR
Sbjct: 390 EELLALGERIGHVSTGLSEESITNCLKTRTYISSTCLNLEEAASMDLENDSCIICQEEYR 449

Query: 169 NQEKVGTLGCGHEYHADCIKKWLQVKNVCPICKVQAIS 282
           NQEK+G L CGHEYHA C+KKWL VKNVCPICK  A++
Sbjct: 450 NQEKIGFLDCGHEYHAGCLKKWLLVKNVCPICKAPAMT 487


>ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264059 [Vitis vinifera]
          Length = 543

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   EELLALGEQIGSVITGLPEETILRHLKTRVYISSASKDMNN----EVETGTCIVCQVEYR 168
           EELLALGE+IG V TGL EE+I   LKTR YISS   ++      ++E  +CI+CQ EYR
Sbjct: 444 EELLALGERIGHVSTGLSEESITNCLKTRTYISSTCLNLEEAASMDLENDSCIICQEEYR 503

Query: 169 NQEKVGTLGCGHEYHADCIKKWLQVKNVCPICKVQAIS 282
           NQEK+G L CGHEYHA C+KKWL VKNVCPICK  A++
Sbjct: 504 NQEKIGFLDCGHEYHAGCLKKWLLVKNVCPICKAPAMT 541


>ref|XP_003526011.1| PREDICTED: uncharacterized protein LOC100779069 [Glycine max]
          Length = 468

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 6/100 (6%)
 Frame = +1

Query: 1   EELLALGEQIGSVITGLPEETILRHLKTRVYISSASKDMN------NEVETGTCIVCQVE 162
           EELLALGE+IG V TGL EE I   +KT+ Y+  A+  +N       E ET +CI+CQ E
Sbjct: 363 EELLALGERIGKVNTGLSEEMITSQMKTKSYLLLATNAINLEEAASEEQETDSCIICQDE 422

Query: 163 YRNQEKVGTLGCGHEYHADCIKKWLQVKNVCPICKVQAIS 282
           Y+NQEK+G L CGHEYHADC+KKWL VKNVCP+CK +A++
Sbjct: 423 YKNQEKIGILQCGHEYHADCLKKWLLVKNVCPVCKSEALT 462


>ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|222846156|gb|EEE83703.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/101 (57%), Positives = 78/101 (77%), Gaps = 5/101 (4%)
 Frame = +1

Query: 1   EELLALGEQIGSVITGLPEETILRHLKTRVYISSASKDMNNEV-----ETGTCIVCQVEY 165
           EELLALGE+IG+V TGL + TI   LKTR Y+SS    +N EV     E  +CI+CQ +Y
Sbjct: 432 EELLALGERIGNVNTGLSDATIRSQLKTRTYLSSPYS-INLEVSCMDQEADSCIICQDDY 490

Query: 166 RNQEKVGTLGCGHEYHADCIKKWLQVKNVCPICKVQAISVE 288
           +++EK+ +L CGHEYHADC+KKWL++KNVCPICK +A+++E
Sbjct: 491 KSKEKIASLDCGHEYHADCLKKWLRLKNVCPICKSEALTME 531


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