BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011157
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281291.2| PREDICTED: two-component response regulator ...    77   3e-12
emb|CBI26824.3| unnamed protein product [Vitis vinifera]               77   3e-12
gb|AFK34876.1| unknown [Medicago truncatula]                           74   3e-11
ref|XP_003594816.1| Two-component response regulator ARR2 [Medic...    74   3e-11
gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]         72   6e-11

>ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
           vinifera]
          Length = 643

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
 Frame = -3

Query: 532 MMSADDEFSVVLKGIEHGVCYYLKKPLQIAYFENLWTHXXXXXXXXXXXXXXPNKNDRVY 353
           MMSAD   S V++GI HG C YL KP++    +N+W H                +++   
Sbjct: 110 MMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH------VVRKKWNENKEHEHSG 163

Query: 352 SLHEN----LTGRSVKYTSLVN---KYIWRLQTGKKYSYKETNGKSRNECPSAQKKERVV 194
           SL +N      G   +Y S VN   + I + Q  ++ S  E +G+  NE PS  KK RVV
Sbjct: 164 SLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVV 223

Query: 193 WTEELHAQFLEVVKKI 146
           W+ ELH QF+  V ++
Sbjct: 224 WSVELHQQFVSAVNQL 239


>emb|CBI26824.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
 Frame = -3

Query: 532 MMSADDEFSVVLKGIEHGVCYYLKKPLQIAYFENLWTHXXXXXXXXXXXXXXPNKNDRVY 353
           MMSAD   S V++GI HG C YL KP++    +N+W H                +++   
Sbjct: 110 MMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH------VVRKKWNENKEHEHSG 163

Query: 352 SLHEN----LTGRSVKYTSLVN---KYIWRLQTGKKYSYKETNGKSRNECPSAQKKERVV 194
           SL +N      G   +Y S VN   + I + Q  ++ S  E +G+  NE PS  KK RVV
Sbjct: 164 SLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVV 223

Query: 193 WTEELHAQFLEVVKKI 146
           W+ ELH QF+  V ++
Sbjct: 224 WSVELHQQFVSAVNQL 239


>gb|AFK34876.1| unknown [Medicago truncatula]
          Length = 606

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 46/131 (35%), Positives = 64/131 (48%)
 Frame = -3

Query: 532 MMSADDEFSVVLKGIEHGVCYYLKKPLQIAYFENLWTHXXXXXXXXXXXXXXPNKNDRVY 353
           MMSADD  +VV+KG+ HG C YL KP++I   +N+W H                  D   
Sbjct: 110 MMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNSWKDLRQSGGLDE-- 167

Query: 352 SLHENLTGRSVKYTSLVNKYIWRLQTGKKYSYKETNGKSRNECPSAQKKERVVWTEELHA 173
              E        Y+S  N+     ++ KK   +E     R++C S  KK RVVW+ ELH 
Sbjct: 168 RDREKKASTDANYSSSTNEG----KSSKKRRDEEDEADDRDDC-STSKKPRVVWSIELHQ 222

Query: 172 QFLEVVKKIRL 140
           QF+ VV ++ L
Sbjct: 223 QFMAVVNQLGL 233


>ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
           gi|355483864|gb|AES65067.1| Two-component response
           regulator ARR2 [Medicago truncatula]
          Length = 606

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 46/131 (35%), Positives = 64/131 (48%)
 Frame = -3

Query: 532 MMSADDEFSVVLKGIEHGVCYYLKKPLQIAYFENLWTHXXXXXXXXXXXXXXPNKNDRVY 353
           MMSADD  +VV+KG+ HG C YL KP++I   +N+W H                  D   
Sbjct: 110 MMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNSWKDLRQSGGLDE-- 167

Query: 352 SLHENLTGRSVKYTSLVNKYIWRLQTGKKYSYKETNGKSRNECPSAQKKERVVWTEELHA 173
              E        Y+S  N+     ++ KK   +E     R++C S  KK RVVW+ ELH 
Sbjct: 168 RDREKKASTDANYSSSTNEG----KSSKKRRDEEDEADDRDDC-STSKKPRVVWSIELHQ 222

Query: 172 QFLEVVKKIRL 140
           QF+ VV ++ L
Sbjct: 223 QFMAVVNQLGL 233


>gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
          Length = 643

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/129 (32%), Positives = 62/129 (48%)
 Frame = -3

Query: 532 MMSADDEFSVVLKGIEHGVCYYLKKPLQIAYFENLWTHXXXXXXXXXXXXXXPNKNDRVY 353
           MMSADD  +VV+KG+ HG C YL KP++I   +N+W H                      
Sbjct: 113 MMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKGKHEWKEKDYEQSGSVED 172

Query: 352 SLHENLTGRSVKYTSLVNKYIWRLQTGKKYSYKETNGKSRNECPSAQKKERVVWTEELHA 173
              +      V Y+S  N+  W+    KK    E + + +++  S  KK RVVW+ ELH 
Sbjct: 173 GERQQKPNEDVDYSSSANEGNWK--NSKKRKDDEEDQEEKDD-SSTLKKPRVVWSVELHQ 229

Query: 172 QFLEVVKKI 146
           QF+  V ++
Sbjct: 230 QFVAAVNQL 238