BLASTX nr result
ID: Coptis24_contig00011147
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011147 (813 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi... 227 2e-57 ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi... 227 3e-57 ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi... 221 1e-55 emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera] 221 1e-55 ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cuc... 219 4e-55 >ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230, mitochondrial-like [Glycine max] Length = 530 Score = 227 bits (579), Expect = 2e-57 Identities = 123/248 (49%), Positives = 161/248 (64%), Gaps = 2/248 (0%) Frame = -3 Query: 742 SKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDL 563 +KF +EL TCSK +L+GA+SLY A+S N RLN +H+N L+YLCSNS+ + + L Sbjct: 18 AKFQFELNTCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------L 71 Query: 562 LLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGK-YKIA-PR 389 ++ GF F M + + P EAT+T+VARLAAAKGD D+AF LVK MGK Y A PR Sbjct: 72 KPTALDYGFRAFCHMSALAVLPNEATVTAVARLAAAKGDADYAFDLVKSMGKNYNNALPR 131 Query: 388 LRTFDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLH 209 LRT+DPAL FC D DKAYEVEE+MS + + LEE E+ ALLKVS GR +KVY+YLH Sbjct: 132 LRTYDPALFCFCEMLDADKAYEVEEHMSGVGVSLEEAEVAALLKVSARCGRADKVYEYLH 191 Query: 208 MLRSCVRCVKVSSAQIIEGWFGSEIAVEVGRVDWDEKEVRDAVXXXXXXXXXXXXXXXGE 29 LRS VRCV SSA +IE WF + EVG V+++ +V++ V G+ Sbjct: 192 KLRSSVRCVSESSAVVIEEWFRGSKSSEVGEVEFEAGQVKEGVLRNGGGWHGQGWVGKGD 251 Query: 28 WSVGKSRI 5 W V ++ + Sbjct: 252 WVVSRTSV 259 >ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230, mitochondrial-like [Glycine max] Length = 550 Score = 227 bits (578), Expect = 3e-57 Identities = 122/248 (49%), Positives = 161/248 (64%), Gaps = 2/248 (0%) Frame = -3 Query: 742 SKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDL 563 +KF +EL +CSK +L+GA+SLY A+S N RLN +H+N L+YLCSNS+ + + L Sbjct: 17 TKFQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------L 70 Query: 562 LLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGK-YKIA-PR 389 ++ GF F M + + P EAT+T+VARLAAAKGD D+AF+LVK MGK Y A PR Sbjct: 71 KPTALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGKNYNNALPR 130 Query: 388 LRTFDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLH 209 LRT+DPAL FC D DKAYEVEE+M+ + + LEE E+ ALLKVS GRV+KVY+YLH Sbjct: 131 LRTYDPALFCFCEMLDADKAYEVEEHMNGVGVSLEEAELAALLKVSARCGRVDKVYEYLH 190 Query: 208 MLRSCVRCVKVSSAQIIEGWFGSEIAVEVGRVDWDEKEVRDAVXXXXXXXXXXXXXXXGE 29 LRS VRCV S+A +IE WF A EVG ++D V++ V G+ Sbjct: 191 RLRSSVRCVSESTAVVIEEWFRGSKASEVGEAEFDAGRVKEGVLRNGGGWHGQGWVGKGD 250 Query: 28 WSVGKSRI 5 W V ++ + Sbjct: 251 WVVSRTSV 258 >ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230, mitochondrial-like [Vitis vinifera] Length = 551 Score = 221 bits (564), Expect = 1e-55 Identities = 110/210 (52%), Positives = 154/210 (73%) Frame = -3 Query: 739 KFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDLL 560 KF ++L TCSK +L GA++L+++A+SQN RL H H+N L+YLC+ S+ +++ Sbjct: 14 KFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK------ 67 Query: 559 LLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKIAPRLRT 380 L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY+++PRLRT Sbjct: 68 ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRT 127 Query: 379 FDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLHMLR 200 + PAL FC N + +KA+ VEE+M ++ + EE E+ ALLKVS E+GR +KVY YLH LR Sbjct: 128 YGPALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLR 187 Query: 199 SCVRCVKVSSAQIIEGWFGSEIAVEVGRVD 110 + VR V S+A+IIEGWF E A EVG VD Sbjct: 188 TAVRSVSESTAEIIEGWFCGEAASEVGGVD 217 >emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera] Length = 509 Score = 221 bits (564), Expect = 1e-55 Identities = 110/210 (52%), Positives = 154/210 (73%) Frame = -3 Query: 739 KFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDLL 560 KF ++L TCSK +L GA++L+++A+SQN RL H H+N L+YLC+ S+ +++ Sbjct: 14 KFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK------ 67 Query: 559 LLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKIAPRLRT 380 L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY+++PRLRT Sbjct: 68 ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRT 127 Query: 379 FDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLHMLR 200 + PAL FC N + +KA+ VEE+M ++ + EE E+ ALLKVS E+GR +KVY YLH LR Sbjct: 128 YGPALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLR 187 Query: 199 SCVRCVKVSSAQIIEGWFGSEIAVEVGRVD 110 + VR V S+A+IIEGWF E A EVG VD Sbjct: 188 TAVRSVSESTAEIIEGWFCGEAASEVGGVD 217 >ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cucumis sativus] Length = 538 Score = 219 bits (559), Expect = 4e-55 Identities = 110/245 (44%), Positives = 162/245 (66%) Frame = -3 Query: 739 KFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDLL 560 KF +L CS+ +L A++L +TA+S+ L+ N H+NTL+YLCS ++ + + + Sbjct: 21 KFQLDLTDCSRRKDLLSAITLCETAVSEKLKFNQQHFNTLLYLCSTAISDPSLKES---- 76 Query: 559 LLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKIAPRLRT 380 + GF ++N + S + P EAT+T+VARLAAAK DGD AF+LVK +GKYK+ PRLRT Sbjct: 77 --AVSFGFRVYNLLQSIGVIPNEATVTAVARLAAAKRDGDSAFELVKTIGKYKVTPRLRT 134 Query: 379 FDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLHMLR 200 +DPAL+ FC N +VDKAYEVE++M++ ++LEE +I ALLK+S + G+ +KVY+YLH LR Sbjct: 135 YDPALICFCENLEVDKAYEVEQHMNSAGVELEEPQISALLKLSSDTGKEDKVYEYLHKLR 194 Query: 199 SCVRCVKVSSAQIIEGWFGSEIAVEVGRVDWDEKEVRDAVXXXXXXXXXXXXXXXGEWSV 20 V+CV S+A+IIEGWF SE A ++G D +R+A+ G W V Sbjct: 195 RVVKCVSESTAKIIEGWFCSEKASDIGESTMDIGLIREAILSNGGGWHGKGWIGKGNWVV 254 Query: 19 GKSRI 5 ++ + Sbjct: 255 KRTNV 259