BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011147
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   227   2e-57
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57
ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   221   1e-55
emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]   221   1e-55
ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cuc...   219   4e-55

>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 530

 Score =  227 bits (579), Expect = 2e-57
 Identities = 123/248 (49%), Positives = 161/248 (64%), Gaps = 2/248 (0%)
 Frame = -3

Query: 742 SKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDL 563
           +KF +EL TCSK  +L+GA+SLY  A+S N RLN +H+N L+YLCSNS+ + +      L
Sbjct: 18  AKFQFELNTCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------L 71

Query: 562 LLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGK-YKIA-PR 389
               ++ GF  F  M +  + P EAT+T+VARLAAAKGD D+AF LVK MGK Y  A PR
Sbjct: 72  KPTALDYGFRAFCHMSALAVLPNEATVTAVARLAAAKGDADYAFDLVKSMGKNYNNALPR 131

Query: 388 LRTFDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLH 209
           LRT+DPAL  FC   D DKAYEVEE+MS + + LEE E+ ALLKVS   GR +KVY+YLH
Sbjct: 132 LRTYDPALFCFCEMLDADKAYEVEEHMSGVGVSLEEAEVAALLKVSARCGRADKVYEYLH 191

Query: 208 MLRSCVRCVKVSSAQIIEGWFGSEIAVEVGRVDWDEKEVRDAVXXXXXXXXXXXXXXXGE 29
            LRS VRCV  SSA +IE WF    + EVG V+++  +V++ V               G+
Sbjct: 192 KLRSSVRCVSESSAVVIEEWFRGSKSSEVGEVEFEAGQVKEGVLRNGGGWHGQGWVGKGD 251

Query: 28  WSVGKSRI 5
           W V ++ +
Sbjct: 252 WVVSRTSV 259


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  227 bits (578), Expect = 3e-57
 Identities = 122/248 (49%), Positives = 161/248 (64%), Gaps = 2/248 (0%)
 Frame = -3

Query: 742 SKFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDL 563
           +KF +EL +CSK  +L+GA+SLY  A+S N RLN +H+N L+YLCSNS+ + +      L
Sbjct: 17  TKFQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------L 70

Query: 562 LLLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGK-YKIA-PR 389
               ++ GF  F  M +  + P EAT+T+VARLAAAKGD D+AF+LVK MGK Y  A PR
Sbjct: 71  KPTALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGKNYNNALPR 130

Query: 388 LRTFDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLH 209
           LRT+DPAL  FC   D DKAYEVEE+M+ + + LEE E+ ALLKVS   GRV+KVY+YLH
Sbjct: 131 LRTYDPALFCFCEMLDADKAYEVEEHMNGVGVSLEEAELAALLKVSARCGRVDKVYEYLH 190

Query: 208 MLRSCVRCVKVSSAQIIEGWFGSEIAVEVGRVDWDEKEVRDAVXXXXXXXXXXXXXXXGE 29
            LRS VRCV  S+A +IE WF    A EVG  ++D   V++ V               G+
Sbjct: 191 RLRSSVRCVSESTAVVIEEWFRGSKASEVGEAEFDAGRVKEGVLRNGGGWHGQGWVGKGD 250

Query: 28  WSVGKSRI 5
           W V ++ +
Sbjct: 251 WVVSRTSV 258


>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  221 bits (564), Expect = 1e-55
 Identities = 110/210 (52%), Positives = 154/210 (73%)
 Frame = -3

Query: 739 KFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDLL 560
           KF ++L TCSK  +L GA++L+++A+SQN RL H H+N L+YLC+ S+   +++      
Sbjct: 14  KFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK------ 67

Query: 559 LLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKIAPRLRT 380
            L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY+++PRLRT
Sbjct: 68  ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRT 127

Query: 379 FDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLHMLR 200
           + PAL  FC N + +KA+ VEE+M ++ +  EE E+ ALLKVS E+GR +KVY YLH LR
Sbjct: 128 YGPALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLR 187

Query: 199 SCVRCVKVSSAQIIEGWFGSEIAVEVGRVD 110
           + VR V  S+A+IIEGWF  E A EVG VD
Sbjct: 188 TAVRSVSESTAEIIEGWFCGEAASEVGGVD 217


>emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]
          Length = 509

 Score =  221 bits (564), Expect = 1e-55
 Identities = 110/210 (52%), Positives = 154/210 (73%)
 Frame = -3

Query: 739 KFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDLL 560
           KF ++L TCSK  +L GA++L+++A+SQN RL H H+N L+YLC+ S+   +++      
Sbjct: 14  KFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK------ 67

Query: 559 LLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKIAPRLRT 380
            L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF++V+ MGKY+++PRLRT
Sbjct: 68  ALALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRT 127

Query: 379 FDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLHMLR 200
           + PAL  FC N + +KA+ VEE+M ++ +  EE E+ ALLKVS E+GR +KVY YLH LR
Sbjct: 128 YGPALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLR 187

Query: 199 SCVRCVKVSSAQIIEGWFGSEIAVEVGRVD 110
           + VR V  S+A+IIEGWF  E A EVG VD
Sbjct: 188 TAVRSVSESTAEIIEGWFCGEAASEVGGVD 217


>ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cucumis sativus]
          Length = 538

 Score =  219 bits (559), Expect = 4e-55
 Identities = 110/245 (44%), Positives = 162/245 (66%)
 Frame = -3

Query: 739 KFMYELGTCSKHNNLQGALSLYQTALSQNLRLNHNHYNTLIYLCSNSLINTTNQHHHDLL 560
           KF  +L  CS+  +L  A++L +TA+S+ L+ N  H+NTL+YLCS ++ + + +      
Sbjct: 21  KFQLDLTDCSRRKDLLSAITLCETAVSEKLKFNQQHFNTLLYLCSTAISDPSLKES---- 76

Query: 559 LLTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFQLVKGMGKYKIAPRLRT 380
              +  GF ++N + S  + P EAT+T+VARLAAAK DGD AF+LVK +GKYK+ PRLRT
Sbjct: 77  --AVSFGFRVYNLLQSIGVIPNEATVTAVARLAAAKRDGDSAFELVKTIGKYKVTPRLRT 134

Query: 379 FDPALLLFCGNKDVDKAYEVEEYMSTLVIQLEELEIGALLKVSGEVGRVEKVYQYLHMLR 200
           +DPAL+ FC N +VDKAYEVE++M++  ++LEE +I ALLK+S + G+ +KVY+YLH LR
Sbjct: 135 YDPALICFCENLEVDKAYEVEQHMNSAGVELEEPQISALLKLSSDTGKEDKVYEYLHKLR 194

Query: 199 SCVRCVKVSSAQIIEGWFGSEIAVEVGRVDWDEKEVRDAVXXXXXXXXXXXXXXXGEWSV 20
             V+CV  S+A+IIEGWF SE A ++G    D   +R+A+               G W V
Sbjct: 195 RVVKCVSESTAKIIEGWFCSEKASDIGESTMDIGLIREAILSNGGGWHGKGWIGKGNWVV 254

Query: 19  GKSRI 5
            ++ +
Sbjct: 255 KRTNV 259