BLASTX nr result

ID: Coptis24_contig00011145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011145
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758...   177   2e-42
emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]   172   1e-40
ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204...   165   1e-38
ref|XP_002880964.1| hypothetical protein ARALYDRAFT_481720 [Arab...   163   4e-38
ref|XP_002328077.1| predicted protein [Populus trichocarpa] gi|2...   159   6e-37

>ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]
          Length = 196

 Score =  177 bits (450), Expect = 2e-42
 Identities = 98/165 (59%), Positives = 114/165 (69%), Gaps = 8/165 (4%)
 Frame = +3

Query: 288 AASFHG---RNQANQPILRRPKTDPDLLSNRKLAGMLSETMPKLTKLLLNVTIERSLGAV 458
           ++SFH       A Q  LRRPKT PDLLS R ++G+  E  P+LTKLLLNVT++RSLG V
Sbjct: 24  SSSFHSGIPMTMAPQAELRRPKTLPDLLSGRSVSGLSPEGGPRLTKLLLNVTVQRSLGPV 83

Query: 459 HVVMSPESTVGDLIAAAVRQYNKEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMKLG 638
            VVMSP+STVGDLIAA +RQY KEGRR  L TT+ + FDLHYS FSLESLDR EKLM LG
Sbjct: 84  QVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESLDRNEKLMTLG 143

Query: 639 SRNFFMCRSKA-----ADAAPITSAKCSSTCSIQVDKASKTPFEW 758
           SRNFF+C  K+       AA  +    SSTCS + DK SK    W
Sbjct: 144 SRNFFLCCKKSEPDVGESAAEASETTSSSTCSTEADKVSKISVPW 188


>emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]
          Length = 197

 Score =  172 bits (435), Expect = 1e-40
 Identities = 97/166 (58%), Positives = 114/166 (68%), Gaps = 9/166 (5%)
 Frame = +3

Query: 288 AASFHG---RNQANQPILRRPKTDPDLLSNRK-LAGMLSETMPKLTKLLLNVTIERSLGA 455
           ++SFH       A Q  LRRPKT PDLLS R+ ++G+  E  P+LTKLLLNVT++RSLG 
Sbjct: 24  SSSFHSGIPMTMAPQAELRRPKTLPDLLSGRRSVSGLSPEGGPRLTKLLLNVTVQRSLGP 83

Query: 456 VHVVMSPESTVGDLIAAAVRQYNKEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMKL 635
           V VVMSP+STVGDLIAA +RQY KEGRR  L TT+ + FDLHYS FSLESLDR EKLM L
Sbjct: 84  VQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESLDRNEKLMTL 143

Query: 636 GSRNFFMCRSKA-----ADAAPITSAKCSSTCSIQVDKASKTPFEW 758
           GSRNFF+C  K+       A   +    SSTCS + DK SK    W
Sbjct: 144 GSRNFFLCCKKSEPDVGESAXEASETTSSSTCSTEADKVSKISVPW 189


>ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204625 [Cucumis sativus]
           gi|449496238|ref|XP_004160081.1| PREDICTED:
           uncharacterized LOC101204625 [Cucumis sativus]
          Length = 187

 Score =  165 bits (417), Expect = 1e-38
 Identities = 89/165 (53%), Positives = 116/165 (70%), Gaps = 7/165 (4%)
 Frame = +3

Query: 288 AASFHGRNQANQP-ILRRPKTDPDLLSNRKLAGMLS----ETMPKLTKLLLNVTIERSLG 452
           ++SFHG +      +LRRPKTDP+LLS + L    S    +  PK+TKLLLNVTI+ SLG
Sbjct: 16  SSSFHGESSTKTATMLRRPKTDPELLSFKNLGLSASAPSLDGRPKMTKLLLNVTIQGSLG 75

Query: 453 AVHVVMSPESTVGDLIAAAVRQYNKEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMK 632
            V V+MSPE TV DL++A VRQY KEGRRP L T + S FDLHYS FSLESL++EEKL+ 
Sbjct: 76  PVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYSQFSLESLNKEEKLIA 135

Query: 633 LGSRNFFMCRSKAADAAPITSAKCSSTCSIQVDKASK--TPFEWF 761
           LGSRNFF+C  K+ D   + ++  SS+CS +  +++K  + F WF
Sbjct: 136 LGSRNFFLCPKKSDDNNDLIASSSSSSCSKEAKESAKSSSSFSWF 180


>ref|XP_002880964.1| hypothetical protein ARALYDRAFT_481720 [Arabidopsis lyrata subsp.
           lyrata] gi|297326803|gb|EFH57223.1| hypothetical protein
           ARALYDRAFT_481720 [Arabidopsis lyrata subsp. lyrata]
          Length = 190

 Score =  163 bits (413), Expect = 4e-38
 Identities = 90/162 (55%), Positives = 112/162 (69%), Gaps = 5/162 (3%)
 Frame = +3

Query: 288 AASFHGRNQ---ANQPILRRPKTDPDLLSN-RKLAGMLSETMP-KLTKLLLNVTIERSLG 452
           A SFHGR     +N   LRRPKT P+L S  + + G ++E+ P +LTKLLLNVT++ SLG
Sbjct: 24  AMSFHGRGTTPVSNPGELRRPKTLPELFSTGQSITGPVTESFPPRLTKLLLNVTVQGSLG 83

Query: 453 AVHVVMSPESTVGDLIAAAVRQYNKEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMK 632
           AV +++SPESTV DLI AA+RQY KE RRPFL  +E S FDLHYS FSLES+ REEKL+ 
Sbjct: 84  AVQIIISPESTVSDLIDAAIRQYVKEARRPFLPESEPSRFDLHYSQFSLESIGREEKLIS 143

Query: 633 LGSRNFFMCRSKAADAAPITSAKCSSTCSIQVDKASKTPFEW 758
           LGSRNFF+C  K      I     S +CS + +K +KT F W
Sbjct: 144 LGSRNFFLCGRKETGGF-IGGGSSSESCSKEAEKVAKTGFHW 184


>ref|XP_002328077.1| predicted protein [Populus trichocarpa] gi|222837592|gb|EEE75957.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  159 bits (403), Expect = 6e-37
 Identities = 88/158 (55%), Positives = 113/158 (71%), Gaps = 9/158 (5%)
 Frame = +3

Query: 288 AASFHGRNQANQPI--LRRPKTDPDLLSNRKLAGMLSETMPKLTKLLLNVTIERSLGAVH 461
           A+SFHG+  A  P   +RRPKT PDLL+ R L     E  PKLTK+L+NVT++ S+GAV 
Sbjct: 28  ASSFHGKIPAEIPEARIRRPKTLPDLLAGRNLTAKAPEVRPKLTKVLVNVTVQGSVGAVQ 87

Query: 462 VVMSPESTVGDLIAAAVRQYNKEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMKLGS 641
           V+MSPESTVG+LI+AA++QY KEGRRP ++    S F+LHYS FSLESLDREEK+M LGS
Sbjct: 88  VLMSPESTVGELISAAIQQYKKEGRRPIIAND--SRFNLHYSQFSLESLDREEKVMALGS 145

Query: 642 RNFFMCRSKAA-DAAPITSAK------CSSTCSIQVDK 734
           RNFF+C+ K+  D A  +S         S +CS +V+K
Sbjct: 146 RNFFLCQKKSGMDGASCSSGSGGLTTTSSPSCSKEVEK 183


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