BLASTX nr result

ID: Coptis24_contig00011140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011140
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519454.1| ankyrin repeat-containing protein, putative ...   236   1e-59
ref|XP_002267396.1| PREDICTED: BRCA1-associated RING domain prot...   231   2e-58
ref|XP_004137846.1| PREDICTED: tankyrase-1-like [Cucumis sativus...   226   1e-56
ref|NP_001237598.1| uncharacterized protein LOC100527544 [Glycin...   224   3e-56
ref|XP_003535196.1| PREDICTED: ankyrin-1-like [Glycine max]           221   3e-55

>ref|XP_002519454.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223541317|gb|EEF42868.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 203

 Score =  236 bits (601), Expect = 1e-59
 Identities = 112/171 (65%), Positives = 133/171 (77%)
 Frame = +3

Query: 138 TPPHLRPLAEXXXXXXXXXXXXXXXXXSGSIDEPLEDGDTALHLTCLYGYLSCVQLLVQR 317
           TPPHL+ LA                  +GSIDEP+EDGDTALHL CLYGYL CV+LL++R
Sbjct: 33  TPPHLQELAAAAQVGDVDALRRALDNLNGSIDEPVEDGDTALHLACLYGYLPCVELLLER 92

Query: 318 GASLETKDEDGAIPLHDACAGGFAEITQFLINAASSSDCLKQMLDTVDVEGDTPLHHAAR 497
           GA+LE KDEDGAIPLHDACAGGFA+I Q L+N+A+ S+C+++ML+TVD EGDTPLHHAAR
Sbjct: 93  GANLEAKDEDGAIPLHDACAGGFAQIVQLLLNSANGSECIRRMLETVDAEGDTPLHHAAR 152

Query: 498 GEHVDVVRILLAAGASPLKPNIYGKIPAELSDPHTEVRRTLEAAANAVPCQ 650
           GEHVDV+R+LLA+GAS  K N YGK P EL +P TE RR LE AA+AV CQ
Sbjct: 153 GEHVDVIRLLLASGASVTKTNAYGKSPTELPEPDTEARRVLECAASAVSCQ 203


>ref|XP_002267396.1| PREDICTED: BRCA1-associated RING domain protein 1 [Vitis vinifera]
           gi|297739983|emb|CBI30165.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score =  231 bits (589), Expect = 2e-58
 Identities = 117/198 (59%), Positives = 141/198 (71%)
 Frame = +3

Query: 39  MAVPSRRNGMIDGXXXXXXXXXXXXXXXXXXXXTPPHLRPLAEXXXXXXXXXXXXXXXXX 218
           MAVP RRNG+++                      P HLR LA                  
Sbjct: 1   MAVPGRRNGLME--EDDDNDEAVFGELIEDEVEAPAHLRNLAAAAQLGDVDALRLALDTL 58

Query: 219 SGSIDEPLEDGDTALHLTCLYGYLSCVQLLVQRGASLETKDEDGAIPLHDACAGGFAEIT 398
           +GSIDEP+EDGDTALHLTCLYG+L CVQLL++RGASLE KDEDGAIPLHDACAGGF EI 
Sbjct: 59  NGSIDEPVEDGDTALHLTCLYGFLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFTEIV 118

Query: 399 QFLINAASSSDCLKQMLDTVDVEGDTPLHHAARGEHVDVVRILLAAGASPLKPNIYGKIP 578
           + L+N+ ++++C+K+ML++VDVEGDTPLHHAARGEHV V+R+LLA GASP K NIYGKIP
Sbjct: 119 ELLMNSTNNTECVKRMLESVDVEGDTPLHHAARGEHVGVIRLLLAHGASPTKGNIYGKIP 178

Query: 579 AELSDPHTEVRRTLEAAA 632
           +EL+D  TE +R LEAAA
Sbjct: 179 SELADMDTEAKRILEAAA 196


>ref|XP_004137846.1| PREDICTED: tankyrase-1-like [Cucumis sativus]
           gi|449501039|ref|XP_004161261.1| PREDICTED:
           tankyrase-1-like [Cucumis sativus]
          Length = 209

 Score =  226 bits (575), Expect = 1e-56
 Identities = 119/209 (56%), Positives = 143/209 (68%), Gaps = 5/209 (2%)
 Frame = +3

Query: 39  MAVPSRRNGMID-GXXXXXXXXXXXXXXXXXXXXTPPHLRPLAEXXXXXXXXXXXXXXXX 215
           MAVP RRNG++D                      TPPHLRPLA                 
Sbjct: 1   MAVPGRRNGVVDEDDHEEDNALFEEDGVIEFDSDTPPHLRPLATAAQLGDVDCLRTALDN 60

Query: 216 XS-GSIDEPLEDGDTALHLTCLYGYLSCVQLLVQRGASLETKDEDGAIPLHDACAGGFAE 392
            + GSI++ +EDGDTALHLTCLYG+L CV+LL++RGA+LE +DEDGAIPLHDACAGGF E
Sbjct: 61  LTLGSINDAVEDGDTALHLTCLYGHLPCVRLLLERGAALEVQDEDGAIPLHDACAGGFVE 120

Query: 393 ITQFLINAASSSDCLKQMLDTVDVEGDTPLHHAARGEHVDVVRILLAAGASPLKPNIYGK 572
           I Q LIN+A+ ++C+K+ML++VD EGDTPLHHAARGEH  VVR+LLA+GASP K N YGK
Sbjct: 121 IVQLLINSANDTECVKRMLESVDAEGDTPLHHAARGEHAAVVRLLLASGASPTKRNTYGK 180

Query: 573 IPAELSDPHTEVRRTLEAAAN---AVPCQ 650
            P EL DP TE R  LEAAA+   A+ CQ
Sbjct: 181 TPTELPDPGTEARAILEAAASTHMAMGCQ 209


>ref|NP_001237598.1| uncharacterized protein LOC100527544 [Glycine max]
           gi|255632580|gb|ACU16640.1| unknown [Glycine max]
          Length = 204

 Score =  224 bits (571), Expect = 3e-56
 Identities = 114/205 (55%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
 Frame = +3

Query: 39  MAVPSRRNGMIDGXXXXXXXXXXXXXXXXXXXX-TPPHLRPLAEXXXXXXXXXXXXXXXX 215
           MAVP RRNG+ D                      TPPHLR L+                 
Sbjct: 1   MAVPGRRNGINDDEEELDDNALFEEQGVVEDDTDTPPHLRDLSAAAQIGDAHALRLALDN 60

Query: 216 XSGSIDEPLEDGDTALHLTCLYGYLSCVQLLVQRGASLETKDEDGAIPLHDACAGGFAEI 395
            +GSIDEP+EDGDTALHLTCLYG+L+CVQLL++RGA++E KDE+GAIPLHDACAGGF EI
Sbjct: 61  LTGSIDEPVEDGDTALHLTCLYGHLACVQLLIERGANIEAKDEEGAIPLHDACAGGFTEI 120

Query: 396 TQFLINAASSSDCLKQMLDTVDVEGDTPLHHAARGEHVDVVRILLAAGASPLKPNIYGKI 575
            Q L+N A+ ++ +K+ML++VD EGDTPLHHAARGEH+DV+R+LL+ GASP K N+YGK 
Sbjct: 121 VQLLLNRANDAEHIKRMLESVDSEGDTPLHHAARGEHIDVIRLLLSNGASPTKANLYGKA 180

Query: 576 PAELSDPHTEVRRTLEAAANAVPCQ 650
           PA+L +   + RR LEAAA A+ CQ
Sbjct: 181 PADLPE-QEDARRLLEAAALAMACQ 204


>ref|XP_003535196.1| PREDICTED: ankyrin-1-like [Glycine max]
          Length = 204

 Score =  221 bits (562), Expect = 3e-55
 Identities = 114/205 (55%), Positives = 140/205 (68%), Gaps = 1/205 (0%)
 Frame = +3

Query: 39  MAVPSRRNGMIDGXXXXXXXXXXXXXXXXXXXX-TPPHLRPLAEXXXXXXXXXXXXXXXX 215
           MAVP RRNGM D                      TPPHLR L+                 
Sbjct: 1   MAVPGRRNGMNDDEEELDDNALFEEQGAVEDDADTPPHLRDLSAAAQLGDVHALRIALDN 60

Query: 216 XSGSIDEPLEDGDTALHLTCLYGYLSCVQLLVQRGASLETKDEDGAIPLHDACAGGFAEI 395
            +GSIDEP+EDGDTALHLTCLYG+L+CVQLL++RGA++E  DEDGAIPLHDACAGGF EI
Sbjct: 61  LTGSIDEPVEDGDTALHLTCLYGHLACVQLLLERGANIEANDEDGAIPLHDACAGGFTEI 120

Query: 396 TQFLINAASSSDCLKQMLDTVDVEGDTPLHHAARGEHVDVVRILLAAGASPLKPNIYGKI 575
            Q L++ A+ ++ +K+ML++VD EGDTPLHHAARGEHV+V+R+LL+ GASP K N+YGK 
Sbjct: 121 VQLLLSRANDAEHIKRMLESVDSEGDTPLHHAARGEHVEVIRLLLSNGASPTKANLYGKA 180

Query: 576 PAELSDPHTEVRRTLEAAANAVPCQ 650
           PA+L +     RR LEAAA A+ CQ
Sbjct: 181 PADLPEQEA-ARRLLEAAALAMACQ 204


Top