BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011137
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30132.3| unnamed protein product [Vitis vinifera]              284   9e-75
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   284   9e-75
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   278   6e-73
ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana] gi|...   277   1e-72
ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana] gi|...   277   1e-72

>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  284 bits (726), Expect = 9e-75
 Identities = 146/194 (75%), Positives = 156/194 (80%)
 Frame = -1

Query: 582 KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADNSVSISDNGRGIPTE 403
           KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDV L AD+SVSI+DNGRGIPTE
Sbjct: 82  KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTE 141

Query: 402 LHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGM 223
           LHP TKKSSLETVLTVLHA                        VNALSEALEVTVWRDGM
Sbjct: 142 LHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGM 201

Query: 222 EYQQKYSRGKPVTALTSHVLPAELSAARGTKIRFWPDTKVFTTSVEFDHTTVAGRIRELA 43
           EYQQKYSRGKPVT+LT  VLP E +  +GT IRFWPD +VFTT ++FD+ T+AGRIRELA
Sbjct: 202 EYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELA 261

Query: 42  FLNPELTITLRKED 1
           FLNPEL ITLRKED
Sbjct: 262 FLNPELAITLRKED 275


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 719

 Score =  284 bits (726), Expect = 9e-75
 Identities = 146/194 (75%), Positives = 156/194 (80%)
 Frame = -1

Query: 582 KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADNSVSISDNGRGIPTE 403
           KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDV L AD+SVSI+DNGRGIPTE
Sbjct: 94  KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTE 153

Query: 402 LHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGM 223
           LHP TKKSSLETVLTVLHA                        VNALSEALEVTVWRDGM
Sbjct: 154 LHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGM 213

Query: 222 EYQQKYSRGKPVTALTSHVLPAELSAARGTKIRFWPDTKVFTTSVEFDHTTVAGRIRELA 43
           EYQQKYSRGKPVT+LT  VLP E +  +GT IRFWPD +VFTT ++FD+ T+AGRIRELA
Sbjct: 214 EYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELA 273

Query: 42  FLNPELTITLRKED 1
           FLNPEL ITLRKED
Sbjct: 274 FLNPELAITLRKED 287


>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
           Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
           subunit [Nicotiana benthamiana]
          Length = 731

 Score =  278 bits (710), Expect = 6e-73
 Identities = 138/194 (71%), Positives = 153/194 (78%)
 Frame = -1

Query: 582 KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADNSVSISDNGRGIPTE 403
           KRPGMYIGSTG RGLHHLVYEILDNA+DEAQAGFA+K+DV LHADNSVSI+DNGRGIPTE
Sbjct: 106 KRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTE 165

Query: 402 LHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGM 223
           LHP TKKSSLETVLTVLHA                        VNALS+ALEVT+WRDG 
Sbjct: 166 LHPVTKKSSLETVLTVLHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGK 225

Query: 222 EYQQKYSRGKPVTALTSHVLPAELSAARGTKIRFWPDTKVFTTSVEFDHTTVAGRIRELA 43
           EYQQKYSRGKP+T L  H LP E+   +GT IRFWPD +VFTT ++FD+ T+AGRIRELA
Sbjct: 226 EYQQKYSRGKPITTLICHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELA 285

Query: 42  FLNPELTITLRKED 1
           FLNPELTI L+KED
Sbjct: 286 FLNPELTIALKKED 299


>ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana]
           gi|332003318|gb|AED90701.1| DNA gyrase subunit B
           [Arabidopsis thaliana]
          Length = 519

 Score =  277 bits (708), Expect = 1e-72
 Identities = 138/194 (71%), Positives = 154/194 (79%)
 Frame = -1

Query: 582 KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADNSVSISDNGRGIPTE 403
           KRPGMYIGSTG RGLHHLVYEILDNAIDEAQAG+ASKVDV LHAD SVS+ DNGRGIPT+
Sbjct: 107 KRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTD 166

Query: 402 LHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGM 223
           LHPATKKSSLETVLTVLHA                        VNALSEALEV+VWRDGM
Sbjct: 167 LHPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGM 226

Query: 222 EYQQKYSRGKPVTALTSHVLPAELSAARGTKIRFWPDTKVFTTSVEFDHTTVAGRIRELA 43
           E++Q YSRGKP+T LT  VLP E    +GT IRFWPD +VFTT++EFDH T+AGRIRELA
Sbjct: 227 EHKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELA 286

Query: 42  FLNPELTITLRKED 1
           FLNP++TI+L+KED
Sbjct: 287 FLNPKVTISLKKED 300


>ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana]
           gi|75165162|sp|Q94BZ7.1|GYRBM_ARATH RecName: Full=DNA
           gyrase subunit B, mitochondrial; Flags: Precursor
           gi|14517374|gb|AAK62578.1| AT3g10270/F14P13_13
           [Arabidopsis thaliana] gi|22655426|gb|AAM98305.1|
           At3g10270/F14P13_13 [Arabidopsis thaliana]
           gi|332003319|gb|AED90702.1| DNA gyrase subunit B
           [Arabidopsis thaliana]
          Length = 732

 Score =  277 bits (708), Expect = 1e-72
 Identities = 138/194 (71%), Positives = 154/194 (79%)
 Frame = -1

Query: 582 KRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADNSVSISDNGRGIPTE 403
           KRPGMYIGSTG RGLHHLVYEILDNAIDEAQAG+ASKVDV LHAD SVS+ DNGRGIPT+
Sbjct: 107 KRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTD 166

Query: 402 LHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGM 223
           LHPATKKSSLETVLTVLHA                        VNALSEALEV+VWRDGM
Sbjct: 167 LHPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGM 226

Query: 222 EYQQKYSRGKPVTALTSHVLPAELSAARGTKIRFWPDTKVFTTSVEFDHTTVAGRIRELA 43
           E++Q YSRGKP+T LT  VLP E    +GT IRFWPD +VFTT++EFDH T+AGRIRELA
Sbjct: 227 EHKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELA 286

Query: 42  FLNPELTITLRKED 1
           FLNP++TI+L+KED
Sbjct: 287 FLNPKVTISLKKED 300