BLASTX nr result

ID: Coptis24_contig00011110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011110
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615585.1| Cell division protease ftsH-like protein [Me...    58   3e-06
ref|XP_003615584.1| Cell division protease ftsH-like protein [Me...    58   3e-06
ref|XP_002314122.1| predicted protein [Populus trichocarpa] gi|2...    58   3e-06
ref|XP_003518301.1| PREDICTED: ATP-dependent zinc metalloproteas...    58   4e-06
ref|XP_002875825.1| hypothetical protein ARALYDRAFT_485083 [Arab...    58   4e-06

>ref|XP_003615585.1| Cell division protease ftsH-like protein [Medicago truncatula]
           gi|355516920|gb|AES98543.1| Cell division protease
           ftsH-like protein [Medicago truncatula]
          Length = 800

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 90  GPSSSEREKVEGEELQKWLKLVVAPPELAIFLSGKQE 200
           G    E EKVEGEELQKWL+LVVAP ELAIF+ GKQ+
Sbjct: 755 GAQLEEEEKVEGEELQKWLRLVVAPTELAIFMEGKQQ 791


>ref|XP_003615584.1| Cell division protease ftsH-like protein [Medicago truncatula]
           gi|355516919|gb|AES98542.1| Cell division protease
           ftsH-like protein [Medicago truncatula]
          Length = 793

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 90  GPSSSEREKVEGEELQKWLKLVVAPPELAIFLSGKQE 200
           G    E EKVEGEELQKWL+LVVAP ELAIF+ GKQ+
Sbjct: 748 GAQLEEEEKVEGEELQKWLRLVVAPTELAIFMEGKQQ 784


>ref|XP_002314122.1| predicted protein [Populus trichocarpa] gi|222850530|gb|EEE88077.1|
           predicted protein [Populus trichocarpa]
          Length = 792

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +3

Query: 90  GPSSSEREKVEGEELQKWLKLVVAPPELAIFLSGKQE 200
           G    E+EKVEGEELQ+WLKLVVAP ELA+F+ GKQE
Sbjct: 751 GAHLEEKEKVEGEELQEWLKLVVAPKELALFVEGKQE 787


>ref|XP_003518301.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 9,
           chloroplastic-like [Glycine max]
          Length = 803

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 90  GPSSSEREKVEGEELQKWLKLVVAPPELAIFLSGKQ 197
           G    E+EKVEGEELQKWL+LVVAP ELAIF+ GKQ
Sbjct: 758 GAHLEEKEKVEGEELQKWLRLVVAPAELAIFIDGKQ 793


>ref|XP_002875825.1| hypothetical protein ARALYDRAFT_485083 [Arabidopsis lyrata subsp.
           lyrata] gi|297321663|gb|EFH52084.1| hypothetical protein
           ARALYDRAFT_485083 [Arabidopsis lyrata subsp. lyrata]
          Length = 803

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = +3

Query: 90  GPSSSEREKVEGEELQKWLKLVVAPPELAIFLSGKQE 200
           G    E+EKVEGEELQKWL +VVAP ELA+F+ GKQE
Sbjct: 757 GAQLEEKEKVEGEELQKWLSMVVAPDELAVFVKGKQE 793


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