BLASTX nr result

ID: Coptis24_contig00011105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011105
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276425.1| PREDICTED: uncharacterized protein LOC100253...   231   2e-58
emb|CAN65204.1| hypothetical protein VITISV_016716 [Vitis vinifera]   231   2e-58
ref|XP_003553753.1| PREDICTED: uncharacterized protein LOC100779...   203   3e-50
ref|XP_003521741.1| PREDICTED: uncharacterized protein LOC100790...   203   4e-50
ref|XP_002512250.1| transcription regulator, putative [Ricinus c...   202   8e-50

>ref|XP_002276425.1| PREDICTED: uncharacterized protein LOC100253879 [Vitis vinifera]
          Length = 395

 Score =  231 bits (588), Expect = 2e-58
 Identities = 136/249 (54%), Positives = 160/249 (64%), Gaps = 20/249 (8%)
 Frame = -1

Query: 689 PFDDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFN 510
           PFD+SRRLFQRLWTDEDEI LLQGFLEY++QRG   +S++HHDT  FYDQIKSKLQLDFN
Sbjct: 118 PFDESRRLFQRLWTDEDEIELLQGFLEYSAQRGP-NSSSHHHDTTAFYDQIKSKLQLDFN 176

Query: 509 KNQLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWN---------EXXX 357
           KNQLVEKLRRLKKKYRNV++RISSGKE SFK+PHDQ+TFEISRKIW+         E   
Sbjct: 177 KNQLVEKLRRLKKKYRNVVSRISSGKEFSFKSPHDQSTFEISRKIWSTTTAITGVPEETV 236

Query: 356 XXXXXXXXXGN--VNMSDAINGTHVVFN--------AEKKVGXXXXXXXXXXXXSTIXXX 207
                     N   N S   N T   FN        AEKKV               +   
Sbjct: 237 LEDDDANPNPNPTTNPSPNPNPTPKGFNSYSIDVNSAEKKVPRSRKRSRAKLDEKPV--- 293

Query: 206 XXXXXENVTDAVNLMNCPVNSSVPSVIEDTVRSCLSPLFKELMASAINGPA-NFRGFGGM 30
                      +N  N  + SS+PS+IE+TVRSCLSPLFKEL+ +A+NGP+   RGFGGM
Sbjct: 294 -----------LNNQNHEMPSSIPSLIEETVRSCLSPLFKELLHNAVNGPSCGARGFGGM 342

Query: 29  GLSPFAMNF 3
            L+P  ++F
Sbjct: 343 ALNPMPLSF 351


>emb|CAN65204.1| hypothetical protein VITISV_016716 [Vitis vinifera]
          Length = 424

 Score =  231 bits (588), Expect = 2e-58
 Identities = 136/249 (54%), Positives = 160/249 (64%), Gaps = 20/249 (8%)
 Frame = -1

Query: 689 PFDDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFN 510
           PFD+SRRLFQRLWTDEDEI LLQGFLEY++QRG   +S++HHDT  FYDQIKSKLQLDFN
Sbjct: 118 PFDESRRLFQRLWTDEDEIELLQGFLEYSAQRGP-NSSSHHHDTTAFYDQIKSKLQLDFN 176

Query: 509 KNQLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWN---------EXXX 357
           KNQLVEKLRRLKKKYRNV++RISSGKE SFK+PHDQ+TFEISRKIW+         E   
Sbjct: 177 KNQLVEKLRRLKKKYRNVVSRISSGKEFSFKSPHDQSTFEISRKIWSTTTAITGVPEETV 236

Query: 356 XXXXXXXXXGN--VNMSDAINGTHVVFN--------AEKKVGXXXXXXXXXXXXSTIXXX 207
                     N   N S   N T   FN        AEKKV               +   
Sbjct: 237 LEDDDANPNPNPTTNPSPNPNPTPKGFNSYSIDVNSAEKKVPRSRKRSRAKLDEKPV--- 293

Query: 206 XXXXXENVTDAVNLMNCPVNSSVPSVIEDTVRSCLSPLFKELMASAINGPA-NFRGFGGM 30
                      +N  N  + SS+PS+IE+TVRSCLSPLFKEL+ +A+NGP+   RGFGGM
Sbjct: 294 -----------LNNQNHEMPSSIPSLIEETVRSCLSPLFKELLHNAVNGPSCGARGFGGM 342

Query: 29  GLSPFAMNF 3
            L+P  ++F
Sbjct: 343 ALNPMPLSF 351


>ref|XP_003553753.1| PREDICTED: uncharacterized protein LOC100779712 [Glycine max]
          Length = 404

 Score =  203 bits (517), Expect = 3e-50
 Identities = 127/252 (50%), Positives = 146/252 (57%), Gaps = 31/252 (12%)
 Frame = -1

Query: 683 DDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFNKN 504
           DDSRRLFQRLWTDEDEI LLQGFL+YTSQRG    S++H+DTA FYDQIKSKLQLDFNKN
Sbjct: 103 DDSRRLFQRLWTDEDEIELLQGFLDYTSQRG----SSHHNDTALFYDQIKSKLQLDFNKN 158

Query: 503 QLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWNE---------XXXXX 351
           QLVEK+RRLKKKYRNV+N+I SGKE SFK+ HDQATFEISRKIW+               
Sbjct: 159 QLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSNVTPIGDNSLDDDEI 218

Query: 350 XXXXXXXGNVNMSDAINGTHVVFN--AEKKV----------------GXXXXXXXXXXXX 225
                   N+N S  I    ++F   AEKK                 G            
Sbjct: 219 NPNRSPNPNLNFSPIILKNEMIFRNPAEKKTPKRSRPRSAVKIEPNDGSASNRDHDCISN 278

Query: 224 STIXXXXXXXXENVTDAVNLMNCPVNS----SVPSVIEDTVRSCLSPLFKELMASAINGP 57
           +T          N T      N   NS    ++PS+IE+TVRSCLSP+ KELMA A+ G 
Sbjct: 279 ATPTATATAAATNTTPTAATTNDNCNSGYGNNIPSMIEETVRSCLSPVLKELMAGAMGGG 338

Query: 56  ANFRGFGGMGLS 21
           A    FG  G S
Sbjct: 339 A----FGARGFS 346


>ref|XP_003521741.1| PREDICTED: uncharacterized protein LOC100790030 [Glycine max]
          Length = 405

 Score =  203 bits (516), Expect = 4e-50
 Identities = 126/254 (49%), Positives = 146/254 (57%), Gaps = 31/254 (12%)
 Frame = -1

Query: 689 PFDDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFN 510
           P DDSRRLFQRLWTDEDEI LLQGFL+YTSQRG    S++H+DTA FYDQIKSKLQLDFN
Sbjct: 100 PLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRG----SSHHNDTALFYDQIKSKLQLDFN 155

Query: 509 KNQLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWNE---------XXX 357
           KNQLVEK+RRLKKKYRNV+N+I SGKE SFK+ HDQATFEISRKIW+             
Sbjct: 156 KNQLVEKIRRLKKKYRNVLNKICSGKEFSFKSAHDQATFEISRKIWSNVTPVGDNSLDDD 215

Query: 356 XXXXXXXXXGNVNMSDAINGTHVVF--NAEKKV--------------GXXXXXXXXXXXX 225
                     N+N S  I     +F  + EKK                            
Sbjct: 216 EINPSRSPNPNLNFSPVILKNETIFRNSTEKKTPKRSRPRSAVKIEPNDGSASNRDHNCI 275

Query: 224 STIXXXXXXXXENVTDAV------NLMNCPVNSSVPSVIEDTVRSCLSPLFKELMASAIN 63
           S           N T A       N  N    +++PS+IE+TV+SCLSP+ KELMA A+ 
Sbjct: 276 SNTTPTATAAATNTTAAAAAGTNNNNCNSGYGNNIPSLIEETVKSCLSPVLKELMAGAMG 335

Query: 62  GPANFRGFGGMGLS 21
           G A    FGG G S
Sbjct: 336 GGA----FGGRGFS 345


>ref|XP_002512250.1| transcription regulator, putative [Ricinus communis]
           gi|223548211|gb|EEF49702.1| transcription regulator,
           putative [Ricinus communis]
          Length = 415

 Score =  202 bits (514), Expect = 8e-50
 Identities = 121/248 (48%), Positives = 153/248 (61%), Gaps = 21/248 (8%)
 Frame = -1

Query: 683 DDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFNKN 504
           D+SRRLFQRLWTDEDEI LLQGFL+YT+QRG     + HHDTA FYDQIKSKLQLDFNKN
Sbjct: 128 DESRRLFQRLWTDEDEIELLQGFLDYTTQRG-----SNHHDTALFYDQIKSKLQLDFNKN 182

Query: 503 QLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWN-------EXXXXXXX 345
           QLVEKLRRLKKKYRNV+++ISSGK+ SFK+PHDQATFEISRKIW+       E       
Sbjct: 183 QLVEKLRRLKKKYRNVLSKISSGKDFSFKSPHDQATFEISRKIWSSTGKICVEDANLDDD 242

Query: 344 XXXXXGNVNMSDA---INGTHVVFNAEKK--------VGXXXXXXXXXXXXSTIXXXXXX 198
                 N N +DA   I   +      +K                               
Sbjct: 243 DANPSPNPNFNDADVKIEDHNKSTPRSRKRSRSRSSTAAAAAPAAAAASGGLKFEDKRLP 302

Query: 197 XXENVTDAVNLMNCPVNS--SVPSVIEDTVRSCLSPLFKELMASAI-NGPANFRGFGGMG 27
              +V++ +N +N   NS  +V  +IE+TV+SCLSPLFKEL+++A+ +GP   RG GG+ 
Sbjct: 303 NDTDVSNNINNVNNISNSNVNVSHLIEETVKSCLSPLFKELLSNALASGPCGARGIGGLA 362

Query: 26  LSPFAMNF 3
           ++   ++F
Sbjct: 363 MNAMPLSF 370


Top