BLASTX nr result
ID: Coptis24_contig00011100
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011100
(1478 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|2... 308 3e-81
ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243... 294 5e-77
gb|EEE53436.1| hypothetical protein OsJ_36520 [Oryza sativa Japo... 277 6e-72
gb|EAY83526.1| hypothetical protein OsI_38738 [Oryza sativa Indi... 277 6e-72
gb|ABA98957.2| ribosomal protein S6 containing protein, expresse... 277 6e-72
>ref|XP_002311372.1| predicted protein [Populus trichocarpa] gi|222851192|gb|EEE88739.1|
predicted protein [Populus trichocarpa]
Length = 319
Score = 308 bits (788), Expect = 3e-81
Identities = 159/249 (63%), Positives = 191/249 (76%), Gaps = 8/249 (3%)
Frame = +2
Query: 35 MEVL--NTALSPTFSHSKNSHTTLNTKLFISANGCFSPS------SFSNQKLCITGVKKN 190
ME L TA PT H SH+ N LFI A+GC S S S +K I KK+
Sbjct: 1 METLLHRTATFPTPKHRVFSHSIQNKSLFI-ASGCHSFSARPLFLSLGLRKSVIVEAKKS 59
Query: 191 RRGSVITEXXXXXXXDSHSAIPKPDEATGPFPEAVLLKEKKLQEDGRVLPDFADAEEEKL 370
+ + D+HS + KPDEA GPFPEA+LLKEKK QEDGRVLP+FADAEEEKL
Sbjct: 60 NKNN----NNKKNKQDTHSFVAKPDEAIGPFPEAILLKEKKAQEDGRVLPEFADAEEEKL 115
Query: 371 FEFLNLQMESDLNLKEMRHYEVVYLIHEEHKDEVGSVNSKVEEFIKEKKGRIWRFSNWGL 550
FEFLNL+++S+L ++ +RHYEVVYLIHE+H +EVGS+N KV++F++EKKGRIWRF++WG+
Sbjct: 116 FEFLNLELQSELKVERLRHYEVVYLIHEKHDEEVGSLNEKVQDFVREKKGRIWRFNDWGM 175
Query: 551 RRLAYKIRKAKNAHYILMNFELEASLINDFKSLLDKDERVIRHLVIKRDKAITEYCPPPP 730
RRLAYKI+KAKNAHYILMNFELEA INDFK++LDKDERVIRHLVIKRD+AITE CPPPP
Sbjct: 176 RRLAYKIQKAKNAHYILMNFELEARWINDFKNMLDKDERVIRHLVIKRDEAITEDCPPPP 235
Query: 731 EFHTLRPTM 757
EFHTL+ M
Sbjct: 236 EFHTLQGGM 244
>ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243195 [Vitis vinifera]
gi|296083213|emb|CBI22849.3| unnamed protein product
[Vitis vinifera]
Length = 301
Score = 294 bits (752), Expect = 5e-77
Identities = 147/223 (65%), Positives = 179/223 (80%), Gaps = 1/223 (0%)
Frame = +2
Query: 83 NSHTTLNTKLFIS-ANGCFSPSSFSNQKLCITGVKKNRRGSVITEXXXXXXXDSHSAIPK 259
N T N F++ + G S S+ +K + KK ++ SV D+H+ +PK
Sbjct: 24 NGGITWNQTPFLTFSKGYSSISANRLRKSVVAEAKKRKKDSV----------DAHNFVPK 73
Query: 260 PDEATGPFPEAVLLKEKKLQEDGRVLPDFADAEEEKLFEFLNLQMESDLNLKEMRHYEVV 439
PDEATG FPEAVLLKEKK QEDG LP+FADAEEE+L+EFLNLQ+ESDLN++ MRHYEVV
Sbjct: 74 PDEATGVFPEAVLLKEKKAQEDGSFLPEFADAEEEELYEFLNLQLESDLNVERMRHYEVV 133
Query: 440 YLIHEEHKDEVGSVNSKVEEFIKEKKGRIWRFSNWGLRRLAYKIRKAKNAHYILMNFELE 619
YLIHE+H +EV +VNSKV++FI+EKKG++WR ++WGLRRLAYKI+KAKNAHYILMNFELE
Sbjct: 134 YLIHEKHDEEVENVNSKVQDFIREKKGKLWRLNDWGLRRLAYKIQKAKNAHYILMNFELE 193
Query: 620 ASLINDFKSLLDKDERVIRHLVIKRDKAITEYCPPPPEFHTLR 748
A INDFK++LD+DERVIRHLVIKRD+AITE CPPPPEFHTLR
Sbjct: 194 AQWINDFKTMLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLR 236
>gb|EEE53436.1| hypothetical protein OsJ_36520 [Oryza sativa Japonica Group]
Length = 257
Score = 277 bits (708), Expect = 6e-72
Identities = 133/214 (62%), Positives = 167/214 (78%)
Frame = +2
Query: 107 KLFISANGCFSPSSFSNQKLCITGVKKNRRGSVITEXXXXXXXDSHSAIPKPDEATGPFP 286
+L + F+ ++L + K RRG D+HS PK EATGPFP
Sbjct: 25 RLRLQRVAAFTGVGGGGRRLMVAAAAKKRRGKGGEGEEEEERVDTHSFAPKAGEATGPFP 84
Query: 287 EAVLLKEKKLQEDGRVLPDFADAEEEKLFEFLNLQMESDLNLKEMRHYEVVYLIHEEHKD 466
EAVLL++K +++DG+V P+FADA+EEKL+EFLN+QMESDLNLK MRHYEVVYLIHE+ +
Sbjct: 85 EAVLLRKKMVKDDGQVAPEFADADEEKLYEFLNIQMESDLNLKRMRHYEVVYLIHEDRVE 144
Query: 467 EVGSVNSKVEEFIKEKKGRIWRFSNWGLRRLAYKIRKAKNAHYILMNFELEASLINDFKS 646
EV V SKV++F++EKKGRIWR +NWGLRRLAYKI+KA++A+YILMNFE++A INDFK+
Sbjct: 145 EVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANYILMNFEIQAKYINDFKT 204
Query: 647 LLDKDERVIRHLVIKRDKAITEYCPPPPEFHTLR 748
LLDKDER+IRHLV+KRD+AITE C PPPEFHTLR
Sbjct: 205 LLDKDERIIRHLVMKRDEAITEDCSPPPEFHTLR 238
>gb|EAY83526.1| hypothetical protein OsI_38738 [Oryza sativa Indica Group]
Length = 317
Score = 277 bits (708), Expect = 6e-72
Identities = 133/214 (62%), Positives = 167/214 (78%)
Frame = +2
Query: 107 KLFISANGCFSPSSFSNQKLCITGVKKNRRGSVITEXXXXXXXDSHSAIPKPDEATGPFP 286
+L + F+ ++L + K RRG D+HS PK EATGPFP
Sbjct: 25 RLRLQRVAAFTGVGGGGRRLMVAAAAKKRRGKGGEGEEEEERVDTHSFAPKAGEATGPFP 84
Query: 287 EAVLLKEKKLQEDGRVLPDFADAEEEKLFEFLNLQMESDLNLKEMRHYEVVYLIHEEHKD 466
EAVLL++K +++DG+V P+FADA+EEKL+EFLN+QMESDLNLK MRHYEVVYLIHE+ +
Sbjct: 85 EAVLLRKKMVKDDGQVAPEFADADEEKLYEFLNIQMESDLNLKRMRHYEVVYLIHEDRVE 144
Query: 467 EVGSVNSKVEEFIKEKKGRIWRFSNWGLRRLAYKIRKAKNAHYILMNFELEASLINDFKS 646
EV V SKV++F++EKKGRIWR +NWGLRRLAYKI+KA++A+YILMNFE++A INDFK+
Sbjct: 145 EVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANYILMNFEIQAKYINDFKT 204
Query: 647 LLDKDERVIRHLVIKRDKAITEYCPPPPEFHTLR 748
LLDKDER+IRHLV+KRD+AITE C PPPEFHTLR
Sbjct: 205 LLDKDERIIRHLVMKRDEAITEDCSPPPEFHTLR 238
>gb|ABA98957.2| ribosomal protein S6 containing protein, expressed [Oryza sativa
Japonica Group]
Length = 317
Score = 277 bits (708), Expect = 6e-72
Identities = 133/214 (62%), Positives = 167/214 (78%)
Frame = +2
Query: 107 KLFISANGCFSPSSFSNQKLCITGVKKNRRGSVITEXXXXXXXDSHSAIPKPDEATGPFP 286
+L + F+ ++L + K RRG D+HS PK EATGPFP
Sbjct: 25 RLRLQRVAAFTGVGGGGRRLMVAAAAKKRRGKGGEGEEEEERVDTHSFAPKAGEATGPFP 84
Query: 287 EAVLLKEKKLQEDGRVLPDFADAEEEKLFEFLNLQMESDLNLKEMRHYEVVYLIHEEHKD 466
EAVLL++K +++DG+V P+FADA+EEKL+EFLN+QMESDLNLK MRHYEVVYLIHE+ +
Sbjct: 85 EAVLLRKKMVKDDGQVAPEFADADEEKLYEFLNIQMESDLNLKRMRHYEVVYLIHEDRVE 144
Query: 467 EVGSVNSKVEEFIKEKKGRIWRFSNWGLRRLAYKIRKAKNAHYILMNFELEASLINDFKS 646
EV V SKV++F++EKKGRIWR +NWGLRRLAYKI+KA++A+YILMNFE++A INDFK+
Sbjct: 145 EVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANYILMNFEIQAKYINDFKT 204
Query: 647 LLDKDERVIRHLVIKRDKAITEYCPPPPEFHTLR 748
LLDKDER+IRHLV+KRD+AITE C PPPEFHTLR
Sbjct: 205 LLDKDERIIRHLVMKRDEAITEDCSPPPEFHTLR 238