BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011098
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   262   6e-68
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...   253   4e-65
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   252   5e-65
ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [M...   249   4e-64
gb|ABK93026.1| unknown [Populus trichocarpa]                          247   2e-63

>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  262 bits (669), Expect = 6e-68
 Identities = 122/168 (72%), Positives = 143/168 (85%)
 Frame = -2

Query: 514 VDFLQWKREGGHREAHIMNRYHITGRDDYKKYSSICRMVQKQVHLLKQMNPNDPFRIKMT 335
           V+FL+WKREGGHREAH+M+RYH+TGRDDYKKYS +CRMVQK V++LKQM+P DPFRI+MT
Sbjct: 15  VNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQMDPRDPFRIEMT 74

Query: 334 DLLLEKLYNMGVIQQMKSLALCDKXXXXXXXXXXXXXXXXXRKFAEHLKEAVTYIEQGHI 155
           D+LLEKLYN+GVI   KSLALCD+                  KFAEHLKEAVTYIEQGHI
Sbjct: 75  DMLLEKLYNIGVIPTRKSLALCDRLAVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHI 134

Query: 154 RVGPNTVTDPAYLVTRNMEDFITWVDSSKIKKKVLEYHEKQDDYDAMN 11
           RVGP+TVTDPA+LVTRN+EDF+TWVDSSKIK+KVL+Y+E+ DDYDAMN
Sbjct: 135 RVGPDTVTDPAFLVTRNLEDFVTWVDSSKIKRKVLQYNERLDDYDAMN 182


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  253 bits (645), Expect = 4e-65
 Identities = 120/168 (71%), Positives = 135/168 (80%)
 Frame = -2

Query: 514 VDFLQWKREGGHREAHIMNRYHITGRDDYKKYSSICRMVQKQVHLLKQMNPNDPFRIKMT 335
           V+FL WKRE  HREAH+M RYHI  RDDYKKYSS+CRMVQK  ++LKQM+P DPFR++MT
Sbjct: 15  VNFLDWKRENNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPFRVEMT 74

Query: 334 DLLLEKLYNMGVIQQMKSLALCDKXXXXXXXXXXXXXXXXXRKFAEHLKEAVTYIEQGHI 155
           D+LLEKLYNMGVI   KSLALCD+                  KFAEHLKEAVTYIEQGHI
Sbjct: 75  DVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAVTYIEQGHI 134

Query: 154 RVGPNTVTDPAYLVTRNMEDFITWVDSSKIKKKVLEYHEKQDDYDAMN 11
           RVGP TVTDPA+LVTRN EDF+TWVD+SKIK+KVLEY+EK DDYDAMN
Sbjct: 135 RVGPETVTDPAFLVTRNTEDFVTWVDTSKIKRKVLEYNEKVDDYDAMN 182


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  252 bits (644), Expect = 5e-65
 Identities = 120/168 (71%), Positives = 136/168 (80%)
 Frame = -2

Query: 514 VDFLQWKREGGHREAHIMNRYHITGRDDYKKYSSICRMVQKQVHLLKQMNPNDPFRIKMT 335
           V+FL WKREG HREA +M RYHI  RDDYKKYS ICRMVQK V++LKQM+P DP+R++MT
Sbjct: 15  VNFLLWKREGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNILKQMDPRDPYRVEMT 74

Query: 334 DLLLEKLYNMGVIQQMKSLALCDKXXXXXXXXXXXXXXXXXRKFAEHLKEAVTYIEQGHI 155
           D+LLEKLYNMGVI   KSLALCD+                  KFAEHLKEA+TYIEQGHI
Sbjct: 75  DILLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQGHI 134

Query: 154 RVGPNTVTDPAYLVTRNMEDFITWVDSSKIKKKVLEYHEKQDDYDAMN 11
           RVGP TVTDPA+LVTRNMEDF+TWVD+SKIK+KVLEY+EK DDYDAMN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEKLDDYDAMN 182


>ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|217075252|gb|ACJ85986.1| unknown [Medicago
           truncatula] gi|355524736|gb|AET05190.1| U3 small
           nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|388502894|gb|AFK39513.1| unknown [Medicago
           truncatula]
          Length = 182

 Score =  249 bits (636), Expect = 4e-64
 Identities = 117/168 (69%), Positives = 135/168 (80%)
 Frame = -2

Query: 514 VDFLQWKREGGHREAHIMNRYHITGRDDYKKYSSICRMVQKQVHLLKQMNPNDPFRIKMT 335
           V+FL+WKREGGHRE  +M RYH+TGRDDYKKYSSICRMVQK V+ +KQM+P DPFR+ MT
Sbjct: 15  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSSICRMVQKLVNTVKQMDPKDPFRVDMT 74

Query: 334 DLLLEKLYNMGVIQQMKSLALCDKXXXXXXXXXXXXXXXXXRKFAEHLKEAVTYIEQGHI 155
           D LLEKLYNMGVI   +S+ LC++                  KFAEHLKEAVTYIEQGH+
Sbjct: 75  DKLLEKLYNMGVISTRQSITLCERLTVSAFCRRRLSTVLVKLKFAEHLKEAVTYIEQGHV 134

Query: 154 RVGPNTVTDPAYLVTRNMEDFITWVDSSKIKKKVLEYHEKQDDYDAMN 11
           RVGPNT+TDPAYLVTRNMED ITWVDSSKIK+KVL+Y++K DDYD MN
Sbjct: 135 RVGPNTITDPAYLVTRNMEDLITWVDSSKIKRKVLQYNDKLDDYDLMN 182


>gb|ABK93026.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  247 bits (631), Expect = 2e-63
 Identities = 116/168 (69%), Positives = 134/168 (79%)
 Frame = -2

Query: 514 VDFLQWKREGGHREAHIMNRYHITGRDDYKKYSSICRMVQKQVHLLKQMNPNDPFRIKMT 335
           V+FL WKRE  HREAH+M RYHI  RDDYKKYSS+CRMVQK  ++LKQM+P DP+R++MT
Sbjct: 15  VNFLDWKREQNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPYRVEMT 74

Query: 334 DLLLEKLYNMGVIQQMKSLALCDKXXXXXXXXXXXXXXXXXRKFAEHLKEAVTYIEQGHI 155
           D+LLEKLYNMGVI   KSLALCD+                  KFAEHLKEA+TYIEQGHI
Sbjct: 75  DVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQGHI 134

Query: 154 RVGPNTVTDPAYLVTRNMEDFITWVDSSKIKKKVLEYHEKQDDYDAMN 11
           R GP TVTDPA+LVTR+MEDF+TWVD+SKIK+KVLEY+E  DDYDAMN
Sbjct: 135 RAGPETVTDPAFLVTRSMEDFVTWVDTSKIKRKVLEYNENLDDYDAMN 182