BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011094
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534745.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|NP_001189517.1| uncharacterized protein [Arabidopsis thalian...    70   4e-17
ref|NP_001189516.1| uncharacterized protein [Arabidopsis thalian...    70   4e-17
gb|AFW85306.1| hypothetical protein ZEAMMB73_849452 [Zea mays]         67   1e-09
emb|CAN61886.1| hypothetical protein VITISV_030710 [Vitis vinifera]    67   1e-09

>ref|XP_002534745.1| conserved hypothetical protein [Ricinus communis]
           gi|223524642|gb|EEF27636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/62 (83%), Positives = 53/62 (85%), Gaps = 2/62 (3%)
 Frame = +3

Query: 45  AFPVAPISPTPRTLFGPRAIVSCCFCL--FFLVVDTGKTQPDDVCWLVVRGLLVPAYPKG 218
           AFP+API P PRTL GPRAIVSCCF L  FFLVVDTGKTQPDDV WLVVRGLLV AYPKG
Sbjct: 36  AFPLAPIPPMPRTLSGPRAIVSCCFHLVVFFLVVDTGKTQPDDVYWLVVRGLLVSAYPKG 95

Query: 219 GA 224
            A
Sbjct: 96  DA 97


>ref|NP_001189517.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330250991|gb|AEC06085.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 346

 Score = 70.1 bits (170), Expect(2) = 4e-17
 Identities = 40/79 (50%), Positives = 40/79 (50%)
 Frame = -1

Query: 382 LLLSRRTYPPRDSWNFSLWIALGEIYQS*ADR*TPFPLLRESNKQNKRIVF*PAPPFGYA 203
           LLLSRRTYPPRDSWNFS                                     PPF YA
Sbjct: 195 LLLSRRTYPPRDSWNFS-------------------------------------PPFEYA 217

Query: 202 GTKSPLTTNQQTSSGWVLP 146
            TKSPLTTNQQTSSGWVLP
Sbjct: 218 DTKSPLTTNQQTSSGWVLP 236



 Score = 42.7 bits (99), Expect(2) = 4e-17
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = -2

Query: 69  GRSEQQGTPRRRRPSWAAVSRSR 1
           GRSEQ+GTPRRR  SWAAVSRSR
Sbjct: 237 GRSEQEGTPRRRFYSWAAVSRSR 259


>ref|NP_001189516.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330250990|gb|AEC06084.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 261

 Score = 70.1 bits (170), Expect(2) = 4e-17
 Identities = 40/79 (50%), Positives = 40/79 (50%)
 Frame = -1

Query: 382 LLLSRRTYPPRDSWNFSLWIALGEIYQS*ADR*TPFPLLRESNKQNKRIVF*PAPPFGYA 203
           LLLSRRTYPPRDSWNFS                                     PPF YA
Sbjct: 110 LLLSRRTYPPRDSWNFS-------------------------------------PPFEYA 132

Query: 202 GTKSPLTTNQQTSSGWVLP 146
            TKSPLTTNQQTSSGWVLP
Sbjct: 133 DTKSPLTTNQQTSSGWVLP 151



 Score = 42.7 bits (99), Expect(2) = 4e-17
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = -2

Query: 69  GRSEQQGTPRRRRPSWAAVSRSR 1
           GRSEQ+GTPRRR  SWAAVSRSR
Sbjct: 152 GRSEQEGTPRRRFYSWAAVSRSR 174


>gb|AFW85306.1| hypothetical protein ZEAMMB73_849452 [Zea mays]
          Length = 74

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -3

Query: 119 ETATNYGSWPKQRPRRRGDRSNRERLDDDARPGL 18
           ETATNYGSWP+QRPRRRGD++ + RLDDDARPGL
Sbjct: 2   ETATNYGSWPRQRPRRRGDQNKKSRLDDDARPGL 35


>emb|CAN61886.1| hypothetical protein VITISV_030710 [Vitis vinifera]
          Length = 273

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/51 (64%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = -3

Query: 161 WLGLAGINNEKKQA---ETATNYGSWPKQRPRRRGDRSNRERLDDDARPGL 18
           W+       +KKQ    +TATNYGSWP+QRPRRRGDRSNRERLDD   PGL
Sbjct: 170 WVLPVSTTRKKKQPNEMKTATNYGSWPRQRPRRRGDRSNRERLDDVFLPGL 220



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/64 (56%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
 Frame = -1

Query: 280 PFPLLRESNKQNKRIVF*PAPPFGYA---GTKSPLTTNQQTSSGWVLPVSTTRKNKQKQQ 110
           P  LLR       R +F   PP  +    GTKSPLTTNQQTSSGWVLPVSTTRK KQ  +
Sbjct: 128 PSDLLRAPRGDESRQLF--TPPLVWTDSNGTKSPLTTNQQTSSGWVLPVSTTRKKKQPNE 185

Query: 109 LTMA 98
           +  A
Sbjct: 186 MKTA 189