BLASTX nr result

ID: Coptis24_contig00011085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011085
         (1964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271404.1| PREDICTED: transmembrane protein 87A [Vitis ...   734   0.0  
emb|CAN62240.1| hypothetical protein VITISV_033728 [Vitis vinifera]   734   0.0  
ref|XP_002532728.1| ptm1, putative [Ricinus communis] gi|2235275...   697   0.0  
ref|XP_003547787.1| PREDICTED: transmembrane protein 87B-like [G...   692   0.0  
ref|XP_002888879.1| hypothetical protein ARALYDRAFT_895100 [Arab...   685   0.0  

>ref|XP_002271404.1| PREDICTED: transmembrane protein 87A [Vitis vinifera]
            gi|297742979|emb|CBI35846.3| unnamed protein product
            [Vitis vinifera]
          Length = 510

 Score =  734 bits (1894), Expect = 0.0
 Identities = 357/492 (72%), Positives = 411/492 (83%), Gaps = 6/492 (1%)
 Frame = +2

Query: 137  VCINASVHEYLNEKFTIKGNAFVVYGGSEGLFASLPTQNTT------DSFIRFEKIKFRR 298
            +C+ ASVHEY   +F  KGNAFVV+GGSEG+++S PT NTT      D+FIRFEKIKFRR
Sbjct: 19   LCVEASVHEYAGVRFVGKGNAFVVHGGSEGIYSSHPTHNTTAAVANGDAFIRFEKIKFRR 78

Query: 299  PKEATQSKSAFVQAIVFEVEDREMIGGSAYGGQRAICCTPDLAKLGACTEGEVIRRQSDK 478
            PKE +   S  +QA+VFEV+DRE IGGSAYGGQRAICCT DLAKLG CT+GE+I R S K
Sbjct: 79   PKEFSNFSSGLIQAVVFEVDDRETIGGSAYGGQRAICCTADLAKLGVCTQGEIIHRPSAK 138

Query: 479  DSTWPYVFGVLFNGDDLVATLQPKSIRITRTGMYNLYFIHCNLELKELTVEGKTIWKNPN 658
            +  WP VFGV F+ D LVA LQ KS+ IT+TGMYNLYFIHC+ +LKE+ +EGKTIWKNP 
Sbjct: 139  NPDWPQVFGVSFSEDKLVARLQVKSMEITKTGMYNLYFIHCDPKLKEVVLEGKTIWKNPT 198

Query: 659  GYLPGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITLVITLGMLEMSLW 838
            GYLPGRMAPLMNFYG MS+A+++LGIFWFSQNARFWREVL LQNC+TLVITLGM EM+ W
Sbjct: 199  GYLPGRMAPLMNFYGIMSLAFVILGIFWFSQNARFWREVLPLQNCVTLVITLGMFEMAFW 258

Query: 839  YFEYVEFNKTGVRPTGITIWAVTFGTVKKTVARIIILIVSMGYGVVRPTLGGLTSKVIML 1018
            YF+Y +FNKTGVRPT  TIWAVTFGTVK+TVAR+IIL+VSMGYGVVRPTLGGLTSKV+ML
Sbjct: 259  YFDYAQFNKTGVRPTATTIWAVTFGTVKRTVARLIILMVSMGYGVVRPTLGGLTSKVVML 318

Query: 1019 GGTFLLASEVLELVENVGTVNDLSGKARLFLVLPVAIMDAFFILWIFTSLSTTLNKLQAR 1198
            G TF +ASEVLELVENVG V+DLSGKARLFLVLPVAI+DAFFILWIFTSLS TL KLQ +
Sbjct: 319  GVTFFMASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFTSLSATLTKLQVK 378

Query: 1199 RIMAKLEIYRKFTNALAVAVIVSVAWICYELYFKANDVYNERWQSAWIIPAFWQVVSFSL 1378
            R+MAKL+IYRKFTNA+AVAVIVSV WICYELYFK++DVYNE+WQ+AWIIPAFWQV+SFSL
Sbjct: 379  RMMAKLDIYRKFTNAMAVAVIVSVGWICYELYFKSSDVYNEQWQNAWIIPAFWQVLSFSL 438

Query: 1379 LCVISALWAPSQSSTRYAYXXXXXXXXXXXXXLTLIKPSQVLSRDLHSSPEPRTMQSGEV 1558
            LCVI ALWAPSQ+STRYAY             LTLIKPS +  +D+   PE R++  G  
Sbjct: 439  LCVICALWAPSQNSTRYAYSDDGSEEFDKDDTLTLIKPSPMPMKDIRGGPEARSLHGGNG 498

Query: 1559 LLDGNNEEDKTE 1594
            L   + EE+KTE
Sbjct: 499  LPSEDVEEEKTE 510


>emb|CAN62240.1| hypothetical protein VITISV_033728 [Vitis vinifera]
          Length = 510

 Score =  734 bits (1894), Expect = 0.0
 Identities = 358/492 (72%), Positives = 411/492 (83%), Gaps = 6/492 (1%)
 Frame = +2

Query: 137  VCINASVHEYLNEKFTIKGNAFVVYGGSEGLFASLPTQNTT------DSFIRFEKIKFRR 298
            +C+ ASVHEY   +F  KGNAFVV+GGSEG+++S PT NTT      D+FIRFEKIKFRR
Sbjct: 19   LCVEASVHEYAGVRFVGKGNAFVVHGGSEGIYSSHPTHNTTAAVANGDAFIRFEKIKFRR 78

Query: 299  PKEATQSKSAFVQAIVFEVEDREMIGGSAYGGQRAICCTPDLAKLGACTEGEVIRRQSDK 478
            PKE +   S  +QA+VFEV+DRE IGGSAYGGQRAICCT DLAKLG CT+GE+I R S K
Sbjct: 79   PKEFSNFSSGLIQAVVFEVDDRETIGGSAYGGQRAICCTADLAKLGVCTQGEIIHRPSAK 138

Query: 479  DSTWPYVFGVLFNGDDLVATLQPKSIRITRTGMYNLYFIHCNLELKELTVEGKTIWKNPN 658
            +  WP VFGV F+ D LVA LQ KS+ IT+TGMYNLYFIHC+ +LKE+ +EGKTIWKNP 
Sbjct: 139  NPDWPQVFGVSFSEDKLVARLQLKSMEITKTGMYNLYFIHCDPKLKEVVLEGKTIWKNPT 198

Query: 659  GYLPGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITLVITLGMLEMSLW 838
            GYLPGRMAPLMNFYG MS+A+++LGIFWFSQNARFWREVL LQNC+TLVITLGM EM+ W
Sbjct: 199  GYLPGRMAPLMNFYGIMSLAFVILGIFWFSQNARFWREVLPLQNCVTLVITLGMFEMAFW 258

Query: 839  YFEYVEFNKTGVRPTGITIWAVTFGTVKKTVARIIILIVSMGYGVVRPTLGGLTSKVIML 1018
            YF+Y +FNKTGVRPT  TIWAVTFGTVK+TVAR+IIL+VSMGYGVVRPTLGGLTSKV+ML
Sbjct: 259  YFDYAQFNKTGVRPTATTIWAVTFGTVKRTVARLIILMVSMGYGVVRPTLGGLTSKVVML 318

Query: 1019 GGTFLLASEVLELVENVGTVNDLSGKARLFLVLPVAIMDAFFILWIFTSLSTTLNKLQAR 1198
            G TF +ASEVLELVENVG V+DLSGKARLFLVLPVAI+DAFFILWIFTSLS TL KLQ +
Sbjct: 319  GVTFFMASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFTSLSATLTKLQVK 378

Query: 1199 RIMAKLEIYRKFTNALAVAVIVSVAWICYELYFKANDVYNERWQSAWIIPAFWQVVSFSL 1378
            R+MAKL+IYRKFTNALAVAVIVSV WICYELYFK++DVYNE+WQ+AWIIPAFWQV+SFSL
Sbjct: 379  RMMAKLDIYRKFTNALAVAVIVSVGWICYELYFKSSDVYNEQWQNAWIIPAFWQVLSFSL 438

Query: 1379 LCVISALWAPSQSSTRYAYXXXXXXXXXXXXXLTLIKPSQVLSRDLHSSPEPRTMQSGEV 1558
            LCVI ALWAPSQ+STRYAY             LTLIKPS +  +D+   PE R++  G  
Sbjct: 439  LCVICALWAPSQNSTRYAYSDDGSEEFDKDDTLTLIKPSPMPMKDVRGGPEARSLHGGNG 498

Query: 1559 LLDGNNEEDKTE 1594
            L   + EE+KTE
Sbjct: 499  LPSEDVEEEKTE 510


>ref|XP_002532728.1| ptm1, putative [Ricinus communis] gi|223527536|gb|EEF29659.1| ptm1,
            putative [Ricinus communis]
          Length = 512

 Score =  697 bits (1799), Expect = 0.0
 Identities = 342/494 (69%), Positives = 403/494 (81%), Gaps = 10/494 (2%)
 Frame = +2

Query: 143  INASVHEYLNEKFTIKGNAFVVYGGSEGLFASLPTQN---------TTDSFIRFEKIKFR 295
            +  SVHEY  ++F  KGNAFVV+GG+EG+++S  + +         + DS+IRFEKIKFR
Sbjct: 19   VEGSVHEYKGDRFVAKGNAFVVHGGNEGIYSSTNSGDFNESNAIPASGDSYIRFEKIKFR 78

Query: 296  RPKEATQSKSAFVQAIVFEVEDREMIGGSAYGGQRAICCTPDLAKLGACTEGEVIRRQSD 475
            R ++     S  VQ IVFEVEDRE IGGSAYGGQRAICCT DLAKLG C++GE+I R S 
Sbjct: 79   RTEDFANFTSGLVQVIVFEVEDRETIGGSAYGGQRAICCTADLAKLGVCSQGEIIHRPST 138

Query: 476  KDSTWPYVFGVLFNGDDLVATLQPKSIRITRTGMYNLYFIHCNLELKELTVEGKTIWKNP 655
            KD +WP+VFGV FN ++L+ATL  +S+ ITRTGMYNLYF+HC+  LKE+ VEGKTIWKNP
Sbjct: 139  KDPSWPHVFGVSFNENELMATLPSRSLEITRTGMYNLYFMHCDPNLKEVFVEGKTIWKNP 198

Query: 656  NGYLPGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITLVITLGMLEMSL 835
             GYLPGRMAPLM FYGFMS+A+++LG+FWF Q AR+W+EV  L NCIT+VITLGM EM+L
Sbjct: 199  AGYLPGRMAPLMKFYGFMSLAFVLLGVFWFYQYARYWKEVFPLLNCITVVITLGMFEMAL 258

Query: 836  WYFEYVEFNKTGVRPTGITIWAVTFGTVKKTVARIIILIVSMGYGVVRPTLGGLTSKVIM 1015
            WYF+Y EFN+TGVRPTGITIWAVTFG VK+TVAR+IIL+VSMGYGVVRPTLGGLTSKVIM
Sbjct: 259  WYFDYAEFNETGVRPTGITIWAVTFGAVKRTVARLIILMVSMGYGVVRPTLGGLTSKVIM 318

Query: 1016 LGGTFLLASEVLELVENVGTVNDLSGKARLFLVLPVAIMDAFFILWIFTSLSTTLNKLQA 1195
            LG TF LASEVLELVENVG V+DLSGKARLFLVLPVAI+DAFFILWIF SLS TLNKLQA
Sbjct: 319  LGVTFFLASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFKSLSATLNKLQA 378

Query: 1196 RRIMAKLEIYRKFTNALAVAVIVSVAWICYELYFKANDVYNERWQSAWIIPAFWQVVSFS 1375
            RR++ KL+IYRKFTNALAVAVIVSV WICYE YFK+ D+YNE WQ+AW+IPAFWQV+SFS
Sbjct: 379  RRMLVKLDIYRKFTNALAVAVIVSVGWICYEFYFKSKDIYNEHWQNAWVIPAFWQVLSFS 438

Query: 1376 LLCVISALWAPSQSSTRYAY-XXXXXXXXXXXXXLTLIKPSQVLSRDLHSSPEPRTMQSG 1552
            LLC+I ALWAPSQ+S RYAY              LTLIKPS + S+D+ S+ E R +Q+ 
Sbjct: 439  LLCIICALWAPSQNSMRYAYSDDVGEEFDRDDSSLTLIKPSAMPSKDIRSASEARPVQAN 498

Query: 1553 EVLLDGNNEEDKTE 1594
                +G+ EEDKTE
Sbjct: 499  NSASNGDLEEDKTE 512


>ref|XP_003547787.1| PREDICTED: transmembrane protein 87B-like [Glycine max]
          Length = 507

 Score =  692 bits (1785), Expect = 0.0
 Identities = 341/493 (69%), Positives = 395/493 (80%), Gaps = 7/493 (1%)
 Frame = +2

Query: 137  VCINASVHEYLNEKFTIKGNAFVVYGGSEGLFASLPTQNTT------DSFIRFEKIKFRR 298
            +C  ASVH+Y  EKF  KGNAFVV+GGSEG++AS P           DS+IRFE+I FRR
Sbjct: 15   LCAEASVHDYRGEKFAAKGNAFVVHGGSEGIYASAPNLTDAYPPPNPDSYIRFERITFRR 74

Query: 299  PKEATQSKSAFVQAIVFEVEDREMIGGSAYGGQRAICCTPDLAKLGACTEGEVIRRQSDK 478
             KE +   S  +QA+VFEVEDRE IGGSAYGGQRA+CCT DLAKLG C EG+VI R S +
Sbjct: 75   NKELSNFSSWPIQAVVFEVEDRETIGGSAYGGQRAVCCTGDLAKLGVCAEGQVIYRPSVE 134

Query: 479  DSTWPYVFGVLFNGDDLVATLQPKSIRITRTGMYNLYFIHCNLELKELTVEGKTIWKNPN 658
            +  WP VFGV F  DD VA L  KSI+IT+TGMYNLYFIHC+  LKEL VEGKT+WKNP+
Sbjct: 135  NPDWPQVFGVSFEMDDEVAVLPLKSIQITKTGMYNLYFIHCDTRLKELVVEGKTVWKNPS 194

Query: 659  GYLPGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITLVITLGMLEMSLW 838
            GYLPGRMAP+  FY FMS AY++LGIFWFSQ ARFW+EV  LQNCIT VITLGM EM+LW
Sbjct: 195  GYLPGRMAPMKVFYQFMSFAYVLLGIFWFSQYARFWKEVFPLQNCITAVITLGMFEMALW 254

Query: 839  YFEYVEFNKTGVRPTGITIWAVTFGTVKKTVARIIILIVSMGYGVVRPTLGGLTSKVIML 1018
            YF+Y EF++TG+RPTG TIWAVTFGTVK+T AR++IL+VSMGYGVVRPTLGGLTSKV+ML
Sbjct: 255  YFDYAEFSETGIRPTGTTIWAVTFGTVKRTFARLVILLVSMGYGVVRPTLGGLTSKVVML 314

Query: 1019 GGTFLLASEVLELVENVGTVNDLSGKARLFLVLPVAIMDAFFILWIFTSLSTTLNKLQAR 1198
            GGTF +ASEVLELVENVG V+DLSGKA+LFLVLP A++D FFILWIFTSLS TL KLQ R
Sbjct: 315  GGTFFIASEVLELVENVGAVSDLSGKAKLFLVLPAAVLDVFFILWIFTSLSATLTKLQTR 374

Query: 1199 RIMAKLEIYRKFTNALAVAVIVSVAWICYELYFKANDVYNERWQSAWIIPAFWQVVSFSL 1378
            R+M KL+IYRKFTNALA AV+VSV WICYELYFK+NDVYNE+WQ+AWIIPAFWQV+S+SL
Sbjct: 375  RMMIKLDIYRKFTNALAAAVLVSVGWICYELYFKSNDVYNEQWQNAWIIPAFWQVLSYSL 434

Query: 1379 LCVISALWAPSQSSTRYAY-XXXXXXXXXXXXXLTLIKPSQVLSRDLHSSPEPRTMQSGE 1555
            LCVI  LWAPSQS+TRYAY              LTLIKPS + S+D+ S P+ R +QS  
Sbjct: 435  LCVICILWAPSQSATRYAYRDDGSDEFDRDETTLTLIKPSPISSKDVRSVPDARPVQSSN 494

Query: 1556 VLLDGNNEEDKTE 1594
               + + EEDK E
Sbjct: 495  GNSNDDLEEDKRE 507


>ref|XP_002888879.1| hypothetical protein ARALYDRAFT_895100 [Arabidopsis lyrata subsp.
            lyrata] gi|297334720|gb|EFH65138.1| hypothetical protein
            ARALYDRAFT_895100 [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score =  685 bits (1767), Expect = 0.0
 Identities = 338/493 (68%), Positives = 399/493 (80%), Gaps = 9/493 (1%)
 Frame = +2

Query: 143  INASVHEYLNEKFTIKGNAFVVYGGSEGLFASLPTQNTTD-----SFIRFEKIKFRRPKE 307
            + ASVHEY NE+F  KGNAFV +GGSEG+++S P+ N T      SFIRFEKIKF+RP+E
Sbjct: 17   VQASVHEYRNERFISKGNAFVFHGGSEGIYSSSPSDNFTSEFDAASFIRFEKIKFQRPEE 76

Query: 308  ATQSKSAFVQAIVFEVEDREMIGGSAYGGQRAICCTPDLAKLGACTEGEVIRRQSDKDST 487
             +   S  VQA+VFEVEDRE IGGSAYGGQRA+CCT DLAKLG C+ G+VI R S KDS 
Sbjct: 77   VSNRSSLPVQAVVFEVEDRENIGGSAYGGQRAVCCTSDLAKLGVCSHGDVIYRPSAKDSG 136

Query: 488  WPYVFGVLFNGDDLVATLQPKSIRITRTGMYNLYFIHCNLELKELTVEGKTIWKNPNGYL 667
            WP VFGV F  ++L  TL  +SI++TRTGMYNLYFIHC+ +LK+L VEGKTIWKNP GYL
Sbjct: 137  WPQVFGVSFAENELSVTLPTRSIQVTRTGMYNLYFIHCDSDLKDLVVEGKTIWKNPTGYL 196

Query: 668  PGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITLVITLGMLEMSLWYFE 847
            PGRMAPLM FYGFMS+A+++LGIFWFSQ ARFWREVL LQNC+TLVITLGM EM+LWYF+
Sbjct: 197  PGRMAPLMYFYGFMSLAFVLLGIFWFSQCARFWREVLPLQNCLTLVITLGMCEMALWYFD 256

Query: 848  YVEFNKTGVRPTGITIWAVTFGTVKKTVARIIILIVSMGYGVVRPTLGGLTSKVIMLGGT 1027
            Y EFN+TG+RPT ITIWAVTFG++K+T ARIIIL+VSMGYGVVRPTLGG TSKVIMLG T
Sbjct: 257  YAEFNETGIRPTVITIWAVTFGSIKRTSARIIILMVSMGYGVVRPTLGGFTSKVIMLGVT 316

Query: 1028 FLLASEVLELVENVGTVNDLSGKARLFLVLPVAIMDAFFILWIFTSLSTTLNKLQARRIM 1207
            F +ASE+LEL+ENVG V+DLSGKARLF VLPVAI+DAFFI+WIF SLS T  KLQ RR++
Sbjct: 317  FFIASEILELMENVGAVSDLSGKARLFFVLPVAILDAFFIIWIFKSLSATFKKLQTRRLL 376

Query: 1208 AKLEIYRKFTNALAVAVIVSVAWICYELYFKANDVYNERWQSAWIIPAFWQVVSFSLLCV 1387
             KL+IYRKFTNALAVA++VS+ WICYELYFK+ DVYNE WQ+AWIIPAFWQ++SFSLL V
Sbjct: 377  VKLDIYRKFTNALAVAILVSLGWICYELYFKSKDVYNEHWQNAWIIPAFWQLLSFSLLLV 436

Query: 1388 ISALWAPSQSSTRYAY----XXXXXXXXXXXXXLTLIKPSQVLSRDLHSSPEPRTMQSGE 1555
            I +LWAPSQ+STRYA+                 LTLIKPS + S D+ +  E R +Q+ E
Sbjct: 437  ICSLWAPSQNSTRYAFSGSSVDTSAEFEKDDYTLTLIKPSPIPSHDVKNLSETRLLQADE 496

Query: 1556 VLLDGNNEEDKTE 1594
               + + EEDK E
Sbjct: 497  GEPEKDLEEDKRE 509


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