BLASTX nr result

ID: Coptis24_contig00011082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011082
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic su...   298   7e-79
emb|CBI37171.3| unnamed protein product [Vitis vinifera]              294   1e-77
gb|ACJ38666.1| cellulose synthase [Betula luminifera]                 291   1e-76
gb|ACC59197.1| cellulose synthase [Betula platyphylla]                290   3e-76
ref|XP_003533679.1| PREDICTED: cellulose synthase A catalytic su...   278   1e-72

>ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Vitis vinifera]
          Length = 1044

 Score =  298 bits (764), Expect = 7e-79
 Identities = 150/255 (58%), Positives = 175/255 (68%)
 Frame = +1

Query: 46  NTMTGLVAGSHRRNELHVMQNADEPPPIRQSVSKNCRVCGDEIGLKDNGELFVACYECGF 225
           NTM GLVAGSH RNE+HV+ + ++ PP RQSV K CRVCGDEIG+K +GELFVAC+ECGF
Sbjct: 4   NTMAGLVAGSHTRNEMHVL-HGEQRPPTRQSVPKLCRVCGDEIGVKADGELFVACHECGF 62

Query: 226 PVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKGDV 405
           PVC+ CY+YERSEGNQCCPQCNTRYKRHKGC RV                 QIK+ +   
Sbjct: 63  PVCKPCYEYERSEGNQCCPQCNTRYKRHKGCARVAGDDEGSLDGDDFNDEFQIKNTR--- 119

Query: 406 TNNNIDINRSENGDYHPQQWHPNGPAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKWKA 585
              N+    SENGDY+PQQWH NG AFS+ AGS+ GKDFEGEKD+YNN EWK+RV+KWK 
Sbjct: 120 DQQNV-FAPSENGDYNPQQWHANGQAFSA-AGSVAGKDFEGEKDIYNNDEWKDRVEKWKT 177

Query: 586 KQEKKGLMSKXXXXXXXXXXXXXFLMAEARQPLWRKIPIPSSKINPYXXXXXXXXXXXXX 765
           +QEKKGL+SK             FL+AEARQPLWRK+PI SSKI+PY             
Sbjct: 178 RQEKKGLISK--DGGNDPGDDDDFLLAEARQPLWRKVPIASSKISPYRIVIVLRLVILAF 235

Query: 766 XXXXXXXTPAKDAYP 810
                  TPA DA+P
Sbjct: 236 FFRFRILTPAYDAFP 250


>emb|CBI37171.3| unnamed protein product [Vitis vinifera]
          Length = 1000

 Score =  294 bits (753), Expect = 1e-77
 Identities = 148/253 (58%), Positives = 173/253 (68%)
 Frame = +1

Query: 52  MTGLVAGSHRRNELHVMQNADEPPPIRQSVSKNCRVCGDEIGLKDNGELFVACYECGFPV 231
           M GLVAGSH RNE+HV+ + ++ PP RQSV K CRVCGDEIG+K +GELFVAC+ECGFPV
Sbjct: 1   MAGLVAGSHTRNEMHVL-HGEQRPPTRQSVPKLCRVCGDEIGVKADGELFVACHECGFPV 59

Query: 232 CRLCYDYERSEGNQCCPQCNTRYKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKGDVTN 411
           C+ CY+YERSEGNQCCPQCNTRYKRHKGC RV                 QIK+ +     
Sbjct: 60  CKPCYEYERSEGNQCCPQCNTRYKRHKGCARVAGDDEGSLDGDDFNDEFQIKNTR---DQ 116

Query: 412 NNIDINRSENGDYHPQQWHPNGPAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKWKAKQ 591
            N+    SENGDY+PQQWH NG AFS+ AGS+ GKDFEGEKD+YNN EWK+RV+KWK +Q
Sbjct: 117 QNV-FAPSENGDYNPQQWHANGQAFSA-AGSVAGKDFEGEKDIYNNDEWKDRVEKWKTRQ 174

Query: 592 EKKGLMSKXXXXXXXXXXXXXFLMAEARQPLWRKIPIPSSKINPYXXXXXXXXXXXXXXX 771
           EKKGL+SK             FL+AEARQPLWRK+PI SSKI+PY               
Sbjct: 175 EKKGLISK--DGGNDPGDDDDFLLAEARQPLWRKVPIASSKISPYRIVIVLRLVILAFFF 232

Query: 772 XXXXXTPAKDAYP 810
                TPA DA+P
Sbjct: 233 RFRILTPAYDAFP 245


>gb|ACJ38666.1| cellulose synthase [Betula luminifera]
          Length = 1049

 Score =  291 bits (745), Expect = 1e-76
 Identities = 146/257 (56%), Positives = 168/257 (65%), Gaps = 2/257 (0%)
 Frame = +1

Query: 46  NTMTG-LVAGSHRRNELHVMQNADEP-PPIRQSVSKNCRVCGDEIGLKDNGELFVACYEC 219
           N MTG LVAGSH RNELHV+   DE  PP RQSVSK CRVCGDEIG K++GELFVAC+ C
Sbjct: 4   NAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVACHVC 63

Query: 220 GFPVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKG 399
           GFPVCR CYDYERSEGNQ CPQCNTRYKR KGCPRV                 Q K+H  
Sbjct: 64  GFPVCRPCYDYERSEGNQSCPQCNTRYKRQKGCPRVAGDDDENFDADDFDDEFQTKNHHD 123

Query: 400 DVTNNNIDINRSENGDYHPQQWHPNGPAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKW 579
           D    ++ I+ SENGDY+  QW P G    S AGS+ GKDFEGE++ Y+N EWKER++KW
Sbjct: 124 DSDRQHVTIH-SENGDYNHPQWKPTG----SFAGSVAGKDFEGEREAYSNAEWKERIEKW 178

Query: 580 KAKQEKKGLMSKXXXXXXXXXXXXXFLMAEARQPLWRKIPIPSSKINPYXXXXXXXXXXX 759
           K +QEK+GL++K             FL+AEARQPLWRK+PI SSKI+PY           
Sbjct: 179 KVRQEKRGLVNKDDGNNDQGDDQDDFLLAEARQPLWRKVPISSSKISPYRIVIVLRLIIL 238

Query: 760 XXXXXXXXXTPAKDAYP 810
                    TPA DAYP
Sbjct: 239 AFFLRFRVLTPAYDAYP 255


>gb|ACC59197.1| cellulose synthase [Betula platyphylla]
          Length = 1048

 Score =  290 bits (741), Expect = 3e-76
 Identities = 146/257 (56%), Positives = 167/257 (64%), Gaps = 2/257 (0%)
 Frame = +1

Query: 46  NTMTG-LVAGSHRRNELHVMQNADEP-PPIRQSVSKNCRVCGDEIGLKDNGELFVACYEC 219
           N MTG LVAGSH RNELHV+   DE  PP RQSVSK CRVCGDEIG K++GELFVAC  C
Sbjct: 4   NAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVACNVC 63

Query: 220 GFPVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKG 399
           GFPVCR CYDYERSEGNQ CPQCNTRYKR KGCPRV                 Q K+H  
Sbjct: 64  GFPVCRPCYDYERSEGNQSCPQCNTRYKRQKGCPRVAGDDDENFDADDFDDEFQTKNHHD 123

Query: 400 DVTNNNIDINRSENGDYHPQQWHPNGPAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKW 579
           D    ++ I+ SENGDY+  QW P G    S AGS+ GKDFEGE++ Y+N EWKER++KW
Sbjct: 124 DSDRQHVTIH-SENGDYNHPQWKPTG----SFAGSVAGKDFEGERETYSNAEWKERIEKW 178

Query: 580 KAKQEKKGLMSKXXXXXXXXXXXXXFLMAEARQPLWRKIPIPSSKINPYXXXXXXXXXXX 759
           K +QEK+GL++K             FL+AEARQPLWRK+PI SSKI+PY           
Sbjct: 179 KVRQEKRGLVNKDDGNNDQGDDQDDFLLAEARQPLWRKVPIASSKISPYRIVIVLRLIIL 238

Query: 760 XXXXXXXXXTPAKDAYP 810
                    TPA DAYP
Sbjct: 239 AFFLRFRVLTPAYDAYP 255


>ref|XP_003533679.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Glycine max]
          Length = 1050

 Score =  278 bits (710), Expect = 1e-72
 Identities = 139/258 (53%), Positives = 171/258 (66%), Gaps = 3/258 (1%)
 Frame = +1

Query: 46  NTMTGLVAGSHRRNELHVMQNADE--PPPIRQSVSKN-CRVCGDEIGLKDNGELFVACYE 216
           N+M GL+ GS+     H  +++DE   PP RQ+ SK  CRVCGDEIG K+NGELFVAC+ 
Sbjct: 4   NSMAGLITGSNS----HFSRDSDEHQTPPTRQASSKTTCRVCGDEIGYKENGELFVACHV 59

Query: 217 CGFPVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHK 396
           CGFPVCR CY+YERSEGNQ CPQCNTRYKRHKGCPRV                  +K+H+
Sbjct: 60  CGFPVCRPCYEYERSEGNQSCPQCNTRYKRHKGCPRVAGDEEDNFDADDFDDEFPVKNHR 119

Query: 397 GDVTNNNIDINRSENGDYHPQQWHPNGPAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDK 576
            D+  N+ D+N  ENGDY+P++ HPNG AFSS AGS+ GKDFEG+K+ Y+N EW+ERV+K
Sbjct: 120 EDLDRNH-DVNHVENGDYNPEKLHPNGQAFSS-AGSVAGKDFEGDKEFYSNAEWQERVEK 177

Query: 577 WKAKQEKKGLMSKXXXXXXXXXXXXXFLMAEARQPLWRKIPIPSSKINPYXXXXXXXXXX 756
           WK +QEK+GL++K             +L+AEARQPLWRK+PI SS INPY          
Sbjct: 178 WKVRQEKRGLLNK-EDGKEDQGEEDDYLLAEARQPLWRKVPISSSLINPYRIVIVMRLVI 236

Query: 757 XXXXXXXXXXTPAKDAYP 810
                     TPA DAYP
Sbjct: 237 LCFFFRFRILTPANDAYP 254


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