BLASTX nr result

ID: Coptis24_contig00011080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011080
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283880.1| PREDICTED: SUMO-activating enzyme subunit 1B...   514   e-143
ref|XP_002511156.1| DNA damage tolerance protein rad31, putative...   503   e-140
ref|XP_002321713.1| predicted protein [Populus trichocarpa] gi|2...   491   e-136
ref|XP_002318142.1| predicted protein [Populus trichocarpa] gi|2...   490   e-136
ref|XP_004145148.1| PREDICTED: SUMO-activating enzyme subunit 1A...   473   e-131

>ref|XP_002283880.1| PREDICTED: SUMO-activating enzyme subunit 1B [Vitis vinifera]
            gi|297734431|emb|CBI15678.3| unnamed protein product
            [Vitis vinifera]
          Length = 323

 Score =  514 bits (1325), Expect = e-143
 Identities = 243/320 (75%), Positives = 282/320 (88%)
 Frame = +2

Query: 56   MENEELTEQETALYDRQIRVWGVDAQRRLSKSHILVSGVSGTIIEFCKNIVLAGVGSLTL 235
            M+ EELTEQETALYDRQIRVWGVDAQRRLSK+HILVSG+ GT++EFCKNIVLAGVGSLTL
Sbjct: 1    MDGEELTEQETALYDRQIRVWGVDAQRRLSKAHILVSGMKGTVVEFCKNIVLAGVGSLTL 60

Query: 236  MDDRMVTVDAISANFLFPPDEDMFRGKSLAEVCCDALKDFNPMVHVSVQKGDLSSFDGDF 415
            +D R VT +A+SANFL PPDE+++ GK+LAE+CCD+LKDFNPMV VSV+KGD+SSF GDF
Sbjct: 61   VDSREVTEEALSANFLIPPDENVYSGKTLAELCCDSLKDFNPMVRVSVEKGDISSFGGDF 120

Query: 416  YDKFSAVVVNCCSLPTKRLINEKCRKRPKRIAFYTLDCRDSCGEIFIDLQNYIYEQKKLD 595
            YD+F  VV++ CS  TK+LINEKCRK  KRIAFYT+DCRDSCGEI++DLQNY Y +KKLD
Sbjct: 121  YDRFDVVVISSCSFATKKLINEKCRKVSKRIAFYTVDCRDSCGEIYVDLQNYTYSKKKLD 180

Query: 596  GTVECQLQYPSFEEAVAVHWSTLPRKVSKVYFGMRVIEKFEEAEGRKAGETSIVDLPSIL 775
             T ECQLQYPSFEEAV + W  LP+KV+K+Y  MRVIE+FEEAEGR  GE SI DLP +L
Sbjct: 181  ETDECQLQYPSFEEAVTIPWRALPKKVTKLYLAMRVIERFEEAEGRNPGEISIADLPGVL 240

Query: 776  KLKKELCQAESFNEYHIPDSLLQRLLMGTMEHPPVCAIIGGILGQEVIKAISGKGDPLKN 955
            KLKKELC+A+SFNE H+PD+LL+RL+  T E PPVCAI+GGILGQEVIKAISGKGDPLKN
Sbjct: 241  KLKKELCEAQSFNESHVPDALLERLVSDTSEFPPVCAILGGILGQEVIKAISGKGDPLKN 300

Query: 956  FFFFDAMDGKGIIEDIGSTN 1015
            FFFFDA+DGKGIIEDI + N
Sbjct: 301  FFFFDAIDGKGIIEDISNPN 320


>ref|XP_002511156.1| DNA damage tolerance protein rad31, putative [Ricinus communis]
            gi|223550271|gb|EEF51758.1| DNA damage tolerance protein
            rad31, putative [Ricinus communis]
          Length = 321

 Score =  503 bits (1295), Expect = e-140
 Identities = 238/316 (75%), Positives = 278/316 (87%)
 Frame = +2

Query: 56   MENEELTEQETALYDRQIRVWGVDAQRRLSKSHILVSGVSGTIIEFCKNIVLAGVGSLTL 235
            M+ EELTEQETALYDRQIRVWG DAQRRL+KSHILV G+ GT+ EFCKNIVLAGVGSLTL
Sbjct: 1    MDGEELTEQETALYDRQIRVWGADAQRRLTKSHILVYGMKGTVAEFCKNIVLAGVGSLTL 60

Query: 236  MDDRMVTVDAISANFLFPPDEDMFRGKSLAEVCCDALKDFNPMVHVSVQKGDLSSFDGDF 415
            +DDR VT DA+SANFL PPDE+   GK++AE+CCD+LK+FNPMV VSV++GDLS F  DF
Sbjct: 61   VDDRAVTEDALSANFLIPPDENGCAGKTIAELCCDSLKEFNPMVRVSVERGDLSGFSEDF 120

Query: 416  YDKFSAVVVNCCSLPTKRLINEKCRKRPKRIAFYTLDCRDSCGEIFIDLQNYIYEQKKLD 595
            +DKF  VVV+CC+L TK+LINEKCRK  KR+AFYT+DCRDSCGEIF+DLQ Y+Y +KK+D
Sbjct: 121  FDKFDVVVVSCCTLATKKLINEKCRKLAKRVAFYTVDCRDSCGEIFVDLQKYLYAKKKVD 180

Query: 596  GTVECQLQYPSFEEAVAVHWSTLPRKVSKVYFGMRVIEKFEEAEGRKAGETSIVDLPSIL 775
             T EC+LQYPSF+E+++V W TLPRKVSK+YF MRVIE+FEEAEGRK GE  I DLP++L
Sbjct: 181  ETTECELQYPSFQESISVPWKTLPRKVSKLYFSMRVIERFEEAEGRKPGEIYIKDLPAVL 240

Query: 776  KLKKELCQAESFNEYHIPDSLLQRLLMGTMEHPPVCAIIGGILGQEVIKAISGKGDPLKN 955
             LKKELC+A+S +E HIP++LL+RL+MG  E PPVCAIIGGILGQEVIK ISGKGDPLKN
Sbjct: 241  SLKKELCEAQSLSESHIPNALLERLVMGGREFPPVCAIIGGILGQEVIKVISGKGDPLKN 300

Query: 956  FFFFDAMDGKGIIEDI 1003
            FFFFDAMDGKGIIEDI
Sbjct: 301  FFFFDAMDGKGIIEDI 316


>ref|XP_002321713.1| predicted protein [Populus trichocarpa] gi|222868709|gb|EEF05840.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  491 bits (1264), Expect = e-136
 Identities = 235/320 (73%), Positives = 276/320 (86%)
 Frame = +2

Query: 56   MENEELTEQETALYDRQIRVWGVDAQRRLSKSHILVSGVSGTIIEFCKNIVLAGVGSLTL 235
            M+ EELTEQETALYDRQIRVWG DAQRRLSKSHILV G+ GTI EFCKNIVLAGVGSLTL
Sbjct: 1    MDGEELTEQETALYDRQIRVWGADAQRRLSKSHILVYGMKGTITEFCKNIVLAGVGSLTL 60

Query: 236  MDDRMVTVDAISANFLFPPDEDMFRGKSLAEVCCDALKDFNPMVHVSVQKGDLSSFDGDF 415
            +DDR VT +A+SANFL PPDE+   GK+LAE+C D+L +FNPMV VSV+KGDL+SF  +F
Sbjct: 61   VDDRAVTEEALSANFLMPPDENACSGKTLAELCRDSLNEFNPMVRVSVEKGDLASFGVEF 120

Query: 416  YDKFSAVVVNCCSLPTKRLINEKCRKRPKRIAFYTLDCRDSCGEIFIDLQNYIYEQKKLD 595
            +DKF  VV++ CSL TK+LINE+CRK  KR++FYT+DCRD CGEIF+DLQ Y Y +K+LD
Sbjct: 121  FDKFDVVVISFCSLATKKLINERCRKLSKRVSFYTVDCRDCCGEIFVDLQKYNYAKKRLD 180

Query: 596  GTVECQLQYPSFEEAVAVHWSTLPRKVSKVYFGMRVIEKFEEAEGRKAGETSIVDLPSIL 775
            GT EC+LQYPSF+EA++V W +LPRKVSK+Y  MRVIE+FEE EGRK GE  I DLP++L
Sbjct: 181  GTTECELQYPSFQEAISVPWRSLPRKVSKLYLAMRVIERFEEDEGRKPGEICIEDLPAVL 240

Query: 776  KLKKELCQAESFNEYHIPDSLLQRLLMGTMEHPPVCAIIGGILGQEVIKAISGKGDPLKN 955
            KLKKELC+A+S NE HIP++LL+RL+MG  E PPVCAIIGGILGQEVIKAISGKGDPLKN
Sbjct: 241  KLKKELCEAQSLNESHIPNALLERLVMGAREFPPVCAIIGGILGQEVIKAISGKGDPLKN 300

Query: 956  FFFFDAMDGKGIIEDIGSTN 1015
            FFFFD++DGKGIIEDI   N
Sbjct: 301  FFFFDSVDGKGIIEDISDPN 320


>ref|XP_002318142.1| predicted protein [Populus trichocarpa] gi|222858815|gb|EEE96362.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  490 bits (1262), Expect = e-136
 Identities = 232/322 (72%), Positives = 273/322 (84%)
 Frame = +2

Query: 56   MENEELTEQETALYDRQIRVWGVDAQRRLSKSHILVSGVSGTIIEFCKNIVLAGVGSLTL 235
            M  EELTEQETALYDRQIRVWG DAQRRLSKSHILV G+ G I EFCKNIVLAGVGSLTL
Sbjct: 1    MNGEELTEQETALYDRQIRVWGADAQRRLSKSHILVYGMKGIIAEFCKNIVLAGVGSLTL 60

Query: 236  MDDRMVTVDAISANFLFPPDEDMFRGKSLAEVCCDALKDFNPMVHVSVQKGDLSSFDGDF 415
            +DDR V+ +A+SANFL PPDE +  GK+LAE+CCD+L++FNPMV VSV+KGDL+S   +F
Sbjct: 61   VDDRAVSEEALSANFLIPPDESVCIGKTLAELCCDSLREFNPMVRVSVEKGDLASLGAEF 120

Query: 416  YDKFSAVVVNCCSLPTKRLINEKCRKRPKRIAFYTLDCRDSCGEIFIDLQNYIYEQKKLD 595
            +DKF  VV++CCSL TK+LINEKCRK  KR++FY +DCRD CGEIF+DLQ Y Y +KK D
Sbjct: 121  FDKFDVVVISCCSLATKKLINEKCRKLSKRVSFYAVDCRDCCGEIFVDLQKYNYAKKKTD 180

Query: 596  GTVECQLQYPSFEEAVAVHWSTLPRKVSKVYFGMRVIEKFEEAEGRKAGETSIVDLPSIL 775
            G  EC+LQYPSF+EA++V W +LPRKVSK+YF MRVIE+FEEAEGRK GE  I DLP++L
Sbjct: 181  GATECELQYPSFQEAISVPWRSLPRKVSKLYFAMRVIERFEEAEGRKPGEICIEDLPAVL 240

Query: 776  KLKKELCQAESFNEYHIPDSLLQRLLMGTMEHPPVCAIIGGILGQEVIKAISGKGDPLKN 955
            KLKKELC+A+S NE H+PD+LL+RL+MG  E PPVCAIIGG LGQEVIKAIS KGDP+KN
Sbjct: 241  KLKKELCEAQSVNESHVPDTLLERLVMGAKEFPPVCAIIGGTLGQEVIKAISSKGDPVKN 300

Query: 956  FFFFDAMDGKGIIEDIGSTNTE 1021
            FF FDA DGKG+IEDI + N E
Sbjct: 301  FFIFDATDGKGMIEDISNPNLE 322


>ref|XP_004145148.1| PREDICTED: SUMO-activating enzyme subunit 1A-like [Cucumis sativus]
            gi|449470758|ref|XP_004153083.1| PREDICTED:
            SUMO-activating enzyme subunit 1A-like [Cucumis sativus]
            gi|449526648|ref|XP_004170325.1| PREDICTED:
            SUMO-activating enzyme subunit 1A-like [Cucumis sativus]
          Length = 321

 Score =  473 bits (1217), Expect = e-131
 Identities = 222/319 (69%), Positives = 271/319 (84%), Gaps = 1/319 (0%)
 Frame = +2

Query: 56   MENEELTEQETALYDRQIRVWGVDAQRRLSKSHILVSGVSGTIIEFCKNIVLAGVGSLTL 235
            M+ EELTEQET LYDRQIRVWG DAQRRLSK+HILV G+ G + EFCKNIVLAG+GSLTL
Sbjct: 1    MDGEELTEQETQLYDRQIRVWGADAQRRLSKAHILVCGMKGAVAEFCKNIVLAGIGSLTL 60

Query: 236  MDDRMVTVDAISANFLFPPDEDMFRGKSLAEVCCDALKDFNPMVHVSVQKGDLSSFDGDF 415
            +D+R+VT +A+SANFL PPDE +F GKS+AE+CCD+LKDFNPMV VSV KG+ SSFD +F
Sbjct: 61   VDNRLVTEEALSANFLIPPDESVFGGKSVAELCCDSLKDFNPMVRVSVIKGEPSSFDEEF 120

Query: 416  YDKFSAVVVNCCSLPTK-RLINEKCRKRPKRIAFYTLDCRDSCGEIFIDLQNYIYEQKKL 592
               F  +VV+CCSL  K + +NEKCRK PKR++FYT+DCRDSCGEIF+DLQ+Y Y +KKL
Sbjct: 121  LKTFDVIVVSCCSLAEKVKSVNEKCRKLPKRVSFYTVDCRDSCGEIFVDLQDYKYAKKKL 180

Query: 593  DGTVECQLQYPSFEEAVAVHWSTLPRKVSKVYFGMRVIEKFEEAEGRKAGETSIVDLPSI 772
            + TVECQL YPSFE+A++V W   PRKVSK+++ +RVIE+FEEAEGR  GETS+ DLP +
Sbjct: 181  EDTVECQLSYPSFEDAISVPWKVHPRKVSKLFYALRVIERFEEAEGRSPGETSVSDLPGV 240

Query: 773  LKLKKELCQAESFNEYHIPDSLLQRLLMGTMEHPPVCAIIGGILGQEVIKAISGKGDPLK 952
            LKLKKE+C+++  NE HIP++L++RL+    E PPVCAIIGGILGQEVIKA+SGKGDPLK
Sbjct: 241  LKLKKEICESQLLNEAHIPNALVERLVTNPTEFPPVCAIIGGILGQEVIKAVSGKGDPLK 300

Query: 953  NFFFFDAMDGKGIIEDIGS 1009
            NFF+FDA+DGKG IEDI S
Sbjct: 301  NFFYFDAVDGKGTIEDISS 319


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