BLASTX nr result

ID: Coptis24_contig00011077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011077
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263238.1| PREDICTED: deoxyhypusine hydroxylase [Vitis ...   131   6e-29
ref|XP_002521020.1| lyase, putative [Ricinus communis] gi|223539...   130   1e-28
ref|XP_002302059.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
gb|AFK41678.1| unknown [Medicago truncatula]                          120   9e-26
ref|XP_002306832.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26

>ref|XP_002263238.1| PREDICTED: deoxyhypusine hydroxylase [Vitis vinifera]
           gi|297744120|emb|CBI37090.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  131 bits (329), Expect = 6e-29
 Identities = 69/82 (84%), Positives = 74/82 (90%)
 Frame = -3

Query: 246 SPFLSVDPATPASCCSSVDQLREVLLDEERDMYQRYAALFALRNRCEDVAVSAIVDSLGA 67
           SPFLSVDPA PAS CSSVDQLREVLLDEE+ MY+RYAALFALRN+  D AVSAIVDSL A
Sbjct: 156 SPFLSVDPAAPASSCSSVDQLREVLLDEEKGMYERYAALFALRNQGGDEAVSAIVDSLCA 215

Query: 66  RSALLRHEVAYVLGQLQNKAAT 1
            SALLRHEVAYVLGQLQ+KAA+
Sbjct: 216 NSALLRHEVAYVLGQLQDKAAS 237


>ref|XP_002521020.1| lyase, putative [Ricinus communis] gi|223539857|gb|EEF41437.1|
           lyase, putative [Ricinus communis]
          Length = 303

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/82 (80%), Positives = 73/82 (89%)
 Frame = -3

Query: 246 SPFLSVDPATPASCCSSVDQLREVLLDEERDMYQRYAALFALRNRCEDVAVSAIVDSLGA 67
           SPFLSVDPA PASCC SVD+LRE LLDE + MY+RYAALFALRN   D AVSAIV+SLGA
Sbjct: 143 SPFLSVDPAVPASCCCSVDKLREALLDEGKGMYERYAALFALRNNGGDDAVSAIVESLGA 202

Query: 66  RSALLRHEVAYVLGQLQNKAAT 1
           +SALL+HEVAYVLGQLQNKAA+
Sbjct: 203 KSALLKHEVAYVLGQLQNKAAS 224


>ref|XP_002302059.1| predicted protein [Populus trichocarpa] gi|222843785|gb|EEE81332.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/82 (78%), Positives = 70/82 (85%)
 Frame = -3

Query: 246 SPFLSVDPATPASCCSSVDQLREVLLDEERDMYQRYAALFALRNRCEDVAVSAIVDSLGA 67
           SPF+SVDPA PAS CSSVD+LR VLLDE+R MY+RY ALFALRN   D AVSAIVDSL A
Sbjct: 158 SPFMSVDPAAPASFCSSVDELRGVLLDEKRSMYERYGALFALRNHGGDEAVSAIVDSLAA 217

Query: 66  RSALLRHEVAYVLGQLQNKAAT 1
            SALL+HEVAYVLGQLQNK A+
Sbjct: 218 SSALLKHEVAYVLGQLQNKVAS 239


>gb|AFK41678.1| unknown [Medicago truncatula]
          Length = 317

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/82 (74%), Positives = 73/82 (89%)
 Frame = -3

Query: 246 SPFLSVDPATPASCCSSVDQLREVLLDEERDMYQRYAALFALRNRCEDVAVSAIVDSLGA 67
           SPF SVDPA PAS CSSV QLR++LLDEE+ MY+RYAALF+LRN   + AV+AIVDSLG+
Sbjct: 158 SPFKSVDPAAPASSCSSVSQLRDLLLDEEKGMYERYAALFSLRNDGGNEAVAAIVDSLGS 217

Query: 66  RSALLRHEVAYVLGQLQNKAAT 1
           +SALL+HEVAYVLGQLQ+KAA+
Sbjct: 218 KSALLKHEVAYVLGQLQDKAAS 239


>ref|XP_002306832.1| predicted protein [Populus trichocarpa] gi|222856281|gb|EEE93828.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/82 (78%), Positives = 69/82 (84%)
 Frame = -3

Query: 246 SPFLSVDPATPASCCSSVDQLREVLLDEERDMYQRYAALFALRNRCEDVAVSAIVDSLGA 67
           SPFLSVDPA PAS  SSVD+LR  LLDE+R MY+RY ALFALRN   D AVSAIVDSL A
Sbjct: 159 SPFLSVDPAAPASLSSSVDELRGFLLDEKRGMYERYGALFALRNHGGDGAVSAIVDSLAA 218

Query: 66  RSALLRHEVAYVLGQLQNKAAT 1
            SALL+HEVAYVLGQLQNKAA+
Sbjct: 219 NSALLKHEVAYVLGQLQNKAAS 240


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