BLASTX nr result

ID: Coptis24_contig00011076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011076
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261...    65   9e-20
ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818...    57   1e-15
ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776...    57   1e-15
ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-15
ref|XP_002516949.1| conserved hypothetical protein [Ricinus comm...    57   9e-15

>ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261891 [Vitis vinifera]
           gi|296083344|emb|CBI22980.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score = 65.1 bits (157), Expect(2) = 9e-20
 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
 Frame = +3

Query: 150 MVGLSDLLEARQNFNK-SPQVINKITMI-KPHLXXXXXXXXXXXXXXXXXXXAISFLDEC 323
           MVGLS +LEA++  NK +PQVINKITM+ KP                     A +FLDEC
Sbjct: 1   MVGLSIVLEAQKGINKKTPQVINKITMMTKP--TPFPSPPARWNSHSPLLPAATTFLDEC 58

Query: 324 FLCKQRLFPGNDIFMY 371
           FLCKQ+L PG DI+MY
Sbjct: 59  FLCKQKLLPGKDIYMY 74



 Score = 58.5 bits (140), Expect(2) = 9e-20
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +2

Query: 437 GDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 553
           GDRAFCS+ECR RQI MDEEE V+R+ C   A +P S+S
Sbjct: 76  GDRAFCSVECRCRQIFMDEEETVRRDNCSLAAMKPTSAS 114


>ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818870 [Glycine max]
          Length = 133

 Score = 56.6 bits (135), Expect(2) = 1e-15
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +2

Query: 437 GDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 553
           GDRAFCS++CR +QI  DEEE +++EKC   A RP SSS
Sbjct: 73  GDRAFCSVDCRCKQIFSDEEEAIQKEKCSLAAMRPTSSS 111



 Score = 52.8 bits (125), Expect(2) = 1e-15
 Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = +3

Query: 150 MVGLSDLLEARQNF--NKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXAISFLDEC 323
           MVGLS +LEA+++    K+PQVINK TM+                         +FLD+C
Sbjct: 1   MVGLSVVLEAQKSCINKKTPQVINKTTMLM-----LSSIHNKPSPQPSSLFQPPTFLDQC 55

Query: 324 FLCKQRLFPGNDIFMY 371
           FLC +RL PG DI+MY
Sbjct: 56  FLCGKRLLPGKDIYMY 71


>ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776779 [Glycine max]
          Length = 135

 Score = 56.6 bits (135), Expect(2) = 1e-15
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +2

Query: 437 GDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 553
           GDRAFCS++CR +QI  DEEE +++EKC   A RP SSS
Sbjct: 75  GDRAFCSVDCRCKQIFTDEEEAIQKEKCSLAAMRPTSSS 113



 Score = 52.8 bits (125), Expect(2) = 1e-15
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = +3

Query: 150 MVGLSDLLEARQNF--NKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXAISFLDEC 323
           MVGLS +LEA+++    K+PQVINK +M+   L                     +FLD+C
Sbjct: 1   MVGLSVVLEAQKSCINKKTPQVINKTSMM---LSSIHNKPSPPLPQPSSLFQPPTFLDQC 57

Query: 324 FLCKQRLFPGNDIFMY 371
           FLC +RL PG DI+MY
Sbjct: 58  FLCGKRLLPGKDIYMY 73


>ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|222838582|gb|EEE76947.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 58.2 bits (139), Expect(2) = 7e-15
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +2

Query: 437 GDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 553
           GDRAFCS+ECR RQI MDEEE +++E C F A +P  S+
Sbjct: 87  GDRAFCSVECRCRQIFMDEEETIRKENCSFSAMKPTGSA 125



 Score = 48.9 bits (115), Expect(2) = 7e-15
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
 Frame = +3

Query: 150 MVGLSDLLEARQNFN---KSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXAI----- 305
           MVGLS +LEA+++ +   K+PQVINK TM+   +                   +      
Sbjct: 1   MVGLSIVLEAQKSGSVNSKTPQVINKATMMMMMISNKPSSGPPSFSSATAPLPSYRNCSF 60

Query: 306 ---SFLDECFLCKQRLFPGNDIFMY 371
              +FL +CFLC Q+L PG DI+MY
Sbjct: 61  PVPAFLQQCFLCGQKLLPGKDIYMY 85


>ref|XP_002516949.1| conserved hypothetical protein [Ricinus communis]
           gi|223544037|gb|EEF45563.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score = 57.4 bits (137), Expect(2) = 9e-15
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +2

Query: 437 GDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 553
           GDRAFCS+ECR RQI  DEEE +++E C F A +P S+S
Sbjct: 86  GDRAFCSVECRCRQIFTDEEETLRKENCSFAAMKPTSTS 124



 Score = 49.3 bits (116), Expect(2) = 9e-15
 Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
 Frame = +3

Query: 150 MVGLSDLLEARQ---------NFNKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXA 302
           MVGLS LLEA+Q         N  K+PQVINK T+    +                    
Sbjct: 1   MVGLSILLEAQQKQQVGFANNNKKKTPQVINKATLNMMMINKLPSPLPSSTSLSSLSSFK 60

Query: 303 I-SFLDECFLCKQRLFPGNDIFMY 371
             +FL+ CFLC Q+L PG DI+MY
Sbjct: 61  PPTFLEHCFLCGQKLLPGKDIYMY 84


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