BLASTX nr result

ID: Coptis24_contig00011063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011063
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306542.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122
ref|XP_002285693.1| PREDICTED: probable mitochondrial 2-oxogluta...   438   e-120
ref|XP_002274117.1| PREDICTED: probable mitochondrial 2-oxogluta...   437   e-120
ref|XP_002514023.1| mitochondrial dicarboxylate carrier protein,...   436   e-120
ref|XP_004166059.1| PREDICTED: mitochondrial uncoupling protein ...   435   e-120

>ref|XP_002306542.1| predicted protein [Populus trichocarpa] gi|222855991|gb|EEE93538.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  444 bits (1143), Expect = e-122
 Identities = 241/321 (75%), Positives = 258/321 (80%), Gaps = 18/321 (5%)
 Frame = -1

Query: 1070 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGET-------PALRPAYA--------G 936
            MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGE         +LRPAYA         
Sbjct: 1    MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENLPNPQQVHSLRPAYAFNSAAIPHN 60

Query: 935  SV---PGSIPRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWT 765
            SV   P  +PRVGPIS GVRIFQ+EG+ ALFSGVSATVLRQTLYSTTRMG+YDILK KWT
Sbjct: 61   SVHIPPPPLPRVGPISAGVRIFQSEGVAALFSGVSATVLRQTLYSTTRMGLYDILKQKWT 120

Query: 764  EPESGHMPLVRKXXXXXXXXXXXXXXGNPADVAMVRMQADGRLPVSERRNYSSVIDAIKR 585
             PE+G+MPL+ K              GNPADVAMVRMQADGRLP S+RRNY+SVIDAI R
Sbjct: 121  NPETGNMPLLSKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPSSQRRNYNSVIDAITR 180

Query: 584  MSKQEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGTHVTXXXXXX 405
            MSKQEGV SLWRGSSLTVNRAMIVTASQLASYDQIKE IL N +MKDGLGTHVT      
Sbjct: 181  MSKQEGVASLWRGSSLTVNRAMIVTASQLASYDQIKEMILENGMMKDGLGTHVTASFAAG 240

Query: 404  XXXXXXSNPIDVIKTRVMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTISRQ 225
                  SNPIDVIKTRVMNM+VE GK  PYSGA+DCAMKTVK+EG+MALYKGFIPTISRQ
Sbjct: 241  FVAAVASNPIDVIKTRVMNMKVEPGKVAPYSGAIDCAMKTVKAEGIMALYKGFIPTISRQ 300

Query: 224  GPFTVVLFVTLEQVRKVLKDF 162
            GPFTVVLFVTLEQVR++LKDF
Sbjct: 301  GPFTVVLFVTLEQVRELLKDF 321


>ref|XP_002285693.1| PREDICTED: probable mitochondrial 2-oxoglutarate/malate carrier
            protein-like [Vitis vinifera]
          Length = 323

 Score =  438 bits (1126), Expect = e-120
 Identities = 233/323 (72%), Positives = 257/323 (79%), Gaps = 20/323 (6%)
 Frame = -1

Query: 1070 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGETPA-------LRPAYAGS------- 933
            MG+KGFVEGGIASIVAGCSTHPLDLIKVRMQLQGE+         LRPA+A +       
Sbjct: 1    MGLKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGESHVPNQAIHNLRPAFAFNSASATMV 60

Query: 932  -VPGSI-----PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTK 771
              P ++     PRVGP+SVGV+I Q EG+ ALFSGVSATVLRQTLYSTTRMG+YD+LK K
Sbjct: 61   GAPSTVHIPPPPRVGPVSVGVKIVQAEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQK 120

Query: 770  WTEPESGHMPLVRKXXXXXXXXXXXXXXGNPADVAMVRMQADGRLPVSERRNYSSVIDAI 591
            W++P+SG+MPLVRK              GNPADVAMVRMQADGRLPV++RRNY  VIDAI
Sbjct: 121  WSDPDSGNMPLVRKIAAGLVAGGIGAAVGNPADVAMVRMQADGRLPVTQRRNYQGVIDAI 180

Query: 590  KRMSKQEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGTHVTXXXX 411
             RMSKQEG+ SLWRGS+LTVNRAMIVTASQLASYDQIKETIL   VMKDGLGTHVT    
Sbjct: 181  TRMSKQEGIASLWRGSALTVNRAMIVTASQLASYDQIKETILEKGVMKDGLGTHVTASFA 240

Query: 410  XXXXXXXXSNPIDVIKTRVMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTIS 231
                    SNP+DVIKTRVMNM+VE G  PPYSGALDCAMKTV++EG MALYKGFIPTIS
Sbjct: 241  AGFVAAVASNPVDVIKTRVMNMKVEPGTAPPYSGALDCAMKTVRAEGPMALYKGFIPTIS 300

Query: 230  RQGPFTVVLFVTLEQVRKVLKDF 162
            RQGPFTVVLFVTLEQVRK+LKDF
Sbjct: 301  RQGPFTVVLFVTLEQVRKILKDF 323


>ref|XP_002274117.1| PREDICTED: probable mitochondrial 2-oxoglutarate/malate carrier
            protein [Vitis vinifera] gi|147816254|emb|CAN77545.1|
            hypothetical protein VITISV_025212 [Vitis vinifera]
          Length = 318

 Score =  437 bits (1125), Expect = e-120
 Identities = 234/318 (73%), Positives = 259/318 (81%), Gaps = 15/318 (4%)
 Frame = -1

Query: 1070 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGET----PA---LRPAYA---GSVPGS 921
            MG+KGFVEGGIASI+AGCSTHPLDLIKVRMQLQGET    PA   LRPA A   G+ P +
Sbjct: 1    MGLKGFVEGGIASIIAGCSTHPLDLIKVRMQLQGETQVPNPAVQTLRPALAFQTGAAPTA 60

Query: 920  I-----PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWTEPE 756
            +     PRVGPI+VGVRI Q EG+ ALFSGVSATVLRQTLYSTTRMG+YDILK KWT+P 
Sbjct: 61   VHVTRPPRVGPITVGVRIVQQEGVVALFSGVSATVLRQTLYSTTRMGLYDILKKKWTDPA 120

Query: 755  SGHMPLVRKXXXXXXXXXXXXXXGNPADVAMVRMQADGRLPVSERRNYSSVIDAIKRMSK 576
            +G+MPLV K              GNPADVAMVRMQADGRLP+++RRNY SV+DAI RMSK
Sbjct: 121  TGNMPLVSKIGAGLIAGGIGAVVGNPADVAMVRMQADGRLPLAQRRNYKSVLDAITRMSK 180

Query: 575  QEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGTHVTXXXXXXXXX 396
            QEGVTSLWRGSSLTVNRAM+VTASQLASYDQIKETIL   +MKDGLGTHVT         
Sbjct: 181  QEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKETILQKGLMKDGLGTHVTASFAAGFVA 240

Query: 395  XXXSNPIDVIKTRVMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTISRQGPF 216
               SNP+DVIKTRVMNM+VE G  PPY+GALDCA+KTV++EG MALYKGFIPTISRQGPF
Sbjct: 241  AVASNPVDVIKTRVMNMKVEPGAAPPYTGALDCALKTVRAEGPMALYKGFIPTISRQGPF 300

Query: 215  TVVLFVTLEQVRKVLKDF 162
            T+VLFVTLEQVRK+LKDF
Sbjct: 301  TIVLFVTLEQVRKLLKDF 318


>ref|XP_002514023.1| mitochondrial dicarboxylate carrier protein, putative [Ricinus
            communis] gi|223547109|gb|EEF48606.1| mitochondrial
            dicarboxylate carrier protein, putative [Ricinus
            communis]
          Length = 317

 Score =  436 bits (1120), Expect = e-120
 Identities = 230/317 (72%), Positives = 253/317 (79%), Gaps = 14/317 (4%)
 Frame = -1

Query: 1070 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGETPA------LRPAYAGSVPGSI--- 918
            MG K FVEGG+ASIVAGCSTHPLDLIKVRMQLQGE         LRPA+A +   S    
Sbjct: 1    MGAKSFVEGGVASIVAGCSTHPLDLIKVRMQLQGENLPKSQVHNLRPAFAFNSTASAAIH 60

Query: 917  -----PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWTEPES 753
                 PRVGP+SVG+RIFQTEG+ ALFSGVSATVLRQTLYSTTRMG+YDILK KWT P++
Sbjct: 61   VASPPPRVGPVSVGIRIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDILKQKWTRPDT 120

Query: 752  GHMPLVRKXXXXXXXXXXXXXXGNPADVAMVRMQADGRLPVSERRNYSSVIDAIKRMSKQ 573
            G+MPLV K              GNPADVAMVRMQADGRLP ++RRNY+ V+DAI RMSKQ
Sbjct: 121  GNMPLVSKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYNGVLDAITRMSKQ 180

Query: 572  EGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGTHVTXXXXXXXXXX 393
            EG+TSLWRGSSLTVNRAMIVTASQLASYDQIKE IL   VM+DGLGTHVT          
Sbjct: 181  EGITSLWRGSSLTVNRAMIVTASQLASYDQIKEAILEKGVMRDGLGTHVTASFAAGFVAA 240

Query: 392  XXSNPIDVIKTRVMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTISRQGPFT 213
              SNP+DVIKTRVMNM VEAGK  PY+GA+DCA+KTV++EGLMALYKGFIPTISRQGPFT
Sbjct: 241  VASNPVDVIKTRVMNMNVEAGKAAPYNGAIDCALKTVRAEGLMALYKGFIPTISRQGPFT 300

Query: 212  VVLFVTLEQVRKVLKDF 162
            VVLFVTLEQVRK+LKDF
Sbjct: 301  VVLFVTLEQVRKLLKDF 317


>ref|XP_004166059.1| PREDICTED: mitochondrial uncoupling protein 4-like [Cucumis sativus]
          Length = 319

 Score =  435 bits (1119), Expect = e-120
 Identities = 232/319 (72%), Positives = 252/319 (78%), Gaps = 16/319 (5%)
 Frame = -1

Query: 1070 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGETPAL---RPAYAGSVPGSI------ 918
            MG KGF EGGIASIVAGCSTHPLDLIKVRMQL GE P L   RPA A +   S+      
Sbjct: 1    MGFKGFAEGGIASIVAGCSTHPLDLIKVRMQLDGEKPPLPNLRPALAFNASRSLVAPESF 60

Query: 917  -------PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWTEP 759
                   PRVGPISVGVRI Q+EG+ ALFSGVSATVLRQTLYSTTRMG+YDILKTKW++P
Sbjct: 61   HIPPPQPPRVGPISVGVRIVQSEGVAALFSGVSATVLRQTLYSTTRMGLYDILKTKWSDP 120

Query: 758  ESGHMPLVRKXXXXXXXXXXXXXXGNPADVAMVRMQADGRLPVSERRNYSSVIDAIKRMS 579
            +SG MPL RK              GNPADVAMVRMQADGRLPV++RRNY+ V+DAI RMS
Sbjct: 121  DSGSMPLTRKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPVAQRRNYAGVVDAITRMS 180

Query: 578  KQEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGTHVTXXXXXXXX 399
            KQEG+TSLWRGS+LTVNRAMIVTA+QLASYDQIKETIL   VMKDGLGTHVT        
Sbjct: 181  KQEGITSLWRGSALTVNRAMIVTAAQLASYDQIKETILEKGVMKDGLGTHVTASFAAGFV 240

Query: 398  XXXXSNPIDVIKTRVMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTISRQGP 219
                SNP+DVIKTRVMNM+VEAG+  PYSGALDCAMKTVK+EG MALYKGFIPTISRQGP
Sbjct: 241  AAVASNPVDVIKTRVMNMKVEAGETAPYSGALDCAMKTVKAEGPMALYKGFIPTISRQGP 300

Query: 218  FTVVLFVTLEQVRKVLKDF 162
            FTVVLFVTLEQVRK+   F
Sbjct: 301  FTVVLFVTLEQVRKIFNQF 319


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