BLASTX nr result

ID: Coptis24_contig00011058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011058
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17567.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_002273483.1| PREDICTED: uncharacterized protein LOC100254...   412   e-113
dbj|BAK08064.1| predicted protein [Hordeum vulgare subsp. vulgare]    385   e-105
ref|XP_002310787.1| predicted protein [Populus trichocarpa] gi|2...   382   e-104
tpg|DAA60011.1| TPA: hypothetical protein ZEAMMB73_897943 [Zea m...   380   e-103

>emb|CBI17567.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  412 bits (1060), Expect = e-113
 Identities = 196/253 (77%), Positives = 227/253 (89%)
 Frame = +2

Query: 8    LEKEHAGSPSVWMDSWIAMKAVIRVQTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFNNN 187
            L+K  A S SVW++SW A KAVI+VQTFQIIVLQG+VGSLPWTAMVFFTMWFELIGF++N
Sbjct: 264  LDKSKASSVSVWLESWTATKAVIKVQTFQIIVLQGVVGSLPWTAMVFFTMWFELIGFDHN 323

Query: 188  NAAGLLSLFAIGCAMGSFLGGVIADKMSRIYPHSGRIMCAQFSTFMGIPFSWFLLIVIPQ 367
            ++A LLS+FAIGCAMGS LGG+IAD+MS+IYPHSGRIMCAQFS  MGIPFSWFLL VIPQ
Sbjct: 324  SSAALLSVFAIGCAMGSLLGGLIADRMSQIYPHSGRIMCAQFSALMGIPFSWFLLTVIPQ 383

Query: 368  TINSWFTFAITLFFMGLMISWCATCANNPIFAEVVPTKHRTMIYAFDRAFEGSFSSFAAP 547
            +++SWFTF  TLF MGL ISW  T AN P+FAEVVP KHRTMIYAFDRAFEGSFSSFAAP
Sbjct: 384  SVSSWFTFGTTLFLMGLTISWNGTAANAPMFAEVVPVKHRTMIYAFDRAFEGSFSSFAAP 443

Query: 548  IVGILSEKIYGYDPKSVNPLFGSKQEAFALSRGLFSVMALPFGLCSLFYSPLYLTFKRDR 727
            +VGILSEK++GYDPK+V+P+ GS Q AFALSRGL S+MA+PFGLC LFY+PLY+ F+RDR
Sbjct: 444  MVGILSEKMFGYDPKTVDPVSGSAQAAFALSRGLLSMMAVPFGLCCLFYTPLYVVFRRDR 503

Query: 728  ESARLASLKEQEM 766
            E+AR+ASLKE+EM
Sbjct: 504  ENARIASLKEEEM 516


>ref|XP_002273483.1| PREDICTED: uncharacterized protein LOC100254794 [Vitis vinifera]
          Length = 494

 Score =  412 bits (1060), Expect = e-113
 Identities = 196/253 (77%), Positives = 227/253 (89%)
 Frame = +2

Query: 8   LEKEHAGSPSVWMDSWIAMKAVIRVQTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFNNN 187
           L+K  A S SVW++SW A KAVI+VQTFQIIVLQG+VGSLPWTAMVFFTMWFELIGF++N
Sbjct: 241 LDKSKASSVSVWLESWTATKAVIKVQTFQIIVLQGVVGSLPWTAMVFFTMWFELIGFDHN 300

Query: 188 NAAGLLSLFAIGCAMGSFLGGVIADKMSRIYPHSGRIMCAQFSTFMGIPFSWFLLIVIPQ 367
           ++A LLS+FAIGCAMGS LGG+IAD+MS+IYPHSGRIMCAQFS  MGIPFSWFLL VIPQ
Sbjct: 301 SSAALLSVFAIGCAMGSLLGGLIADRMSQIYPHSGRIMCAQFSALMGIPFSWFLLTVIPQ 360

Query: 368 TINSWFTFAITLFFMGLMISWCATCANNPIFAEVVPTKHRTMIYAFDRAFEGSFSSFAAP 547
           +++SWFTF  TLF MGL ISW  T AN P+FAEVVP KHRTMIYAFDRAFEGSFSSFAAP
Sbjct: 361 SVSSWFTFGTTLFLMGLTISWNGTAANAPMFAEVVPVKHRTMIYAFDRAFEGSFSSFAAP 420

Query: 548 IVGILSEKIYGYDPKSVNPLFGSKQEAFALSRGLFSVMALPFGLCSLFYSPLYLTFKRDR 727
           +VGILSEK++GYDPK+V+P+ GS Q AFALSRGL S+MA+PFGLC LFY+PLY+ F+RDR
Sbjct: 421 MVGILSEKMFGYDPKTVDPVSGSAQAAFALSRGLLSMMAVPFGLCCLFYTPLYVVFRRDR 480

Query: 728 ESARLASLKEQEM 766
           E+AR+ASLKE+EM
Sbjct: 481 ENARIASLKEEEM 493


>dbj|BAK08064.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 485

 Score =  385 bits (990), Expect = e-105
 Identities = 178/245 (72%), Positives = 216/245 (88%)
 Frame = +2

Query: 32  PSVWMDSWIAMKAVIRVQTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFNNNNAAGLLSL 211
           PS+WMDSW+AM++V++V+TFQIIVLQGI+GSLPWTA+VFFTMWFELIGF+N ++A L SL
Sbjct: 240 PSIWMDSWVAMRSVMKVKTFQIIVLQGIIGSLPWTAIVFFTMWFELIGFDNRSSAALNSL 299

Query: 212 FAIGCAMGSFLGGVIADKMSRIYPHSGRIMCAQFSTFMGIPFSWFLLIVIPQTINSWFTF 391
           FAIGCA G+FLGGV+AD++SR YP S RIMCAQFS FMGIPFSW LL VIPQ+ + WF +
Sbjct: 300 FAIGCASGAFLGGVLADRLSRHYPDSARIMCAQFSAFMGIPFSWILLTVIPQSTDYWFAY 359

Query: 392 AITLFFMGLMISWCATCANNPIFAEVVPTKHRTMIYAFDRAFEGSFSSFAAPIVGILSEK 571
           A+TLFFMG+ ISWCAT ANNP+FAEVVP KHRTMIYAFDRAFEGSF+S AAP VG+++EK
Sbjct: 360 AVTLFFMGITISWCATSANNPMFAEVVPPKHRTMIYAFDRAFEGSFASLAAPAVGLVTEK 419

Query: 572 IYGYDPKSVNPLFGSKQEAFALSRGLFSVMALPFGLCSLFYSPLYLTFKRDRESARLASL 751
           IYGYD K+VN   GS + A+ALSRGL ++M +PFG+C LFYSPLYL FKRDR+SA++AS 
Sbjct: 420 IYGYDAKTVNIANGSAEGAYALSRGLLTMMIVPFGICVLFYSPLYLVFKRDRDSAKVASF 479

Query: 752 KEQEM 766
           K+QE+
Sbjct: 480 KDQEL 484


>ref|XP_002310787.1| predicted protein [Populus trichocarpa] gi|222853690|gb|EEE91237.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  382 bits (981), Expect = e-104
 Identities = 182/255 (71%), Positives = 218/255 (85%)
 Frame = +2

Query: 2   EFLEKEHAGSPSVWMDSWIAMKAVIRVQTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFN 181
           E +EK ++   S+W +SW A KAV++V+TFQIIVLQGIVGSLPWTAMVFFTMWFELIGFN
Sbjct: 207 ELVEKGNSYELSIWTESWTATKAVMKVKTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFN 266

Query: 182 NNNAAGLLSLFAIGCAMGSFLGGVIADKMSRIYPHSGRIMCAQFSTFMGIPFSWFLLIVI 361
           +N  A LLS FA+GC++GS LGG+IAD+MS IYPHSGRIMCAQFS FMGIPFSWFLL VI
Sbjct: 267 HNKTAALLSFFAVGCSLGSLLGGIIADRMSHIYPHSGRIMCAQFSAFMGIPFSWFLLKVI 326

Query: 362 PQTINSWFTFAITLFFMGLMISWCATCANNPIFAEVVPTKHRTMIYAFDRAFEGSFSSFA 541
           PQ+++S+ TFA+TLF MGL ISW  T  N PIFAEVVP KHRTMIYA+DRAFEGSFSSFA
Sbjct: 327 PQSVSSYSTFAVTLFMMGLTISWNGTAVNAPIFAEVVPVKHRTMIYAYDRAFEGSFSSFA 386

Query: 542 APIVGILSEKIYGYDPKSVNPLFGSKQEAFALSRGLFSVMALPFGLCSLFYSPLYLTFKR 721
           AP+VGILSE+++GYD KSV+P+ GS +EA ALS+GL S+MA+PFGLC LFY+PLY  F++
Sbjct: 387 APLVGILSEQMFGYDSKSVDPIKGSVREASALSKGLLSMMAIPFGLCCLFYTPLYRYFRQ 446

Query: 722 DRESARLASLKEQEM 766
           DRE+AR+A  K  E+
Sbjct: 447 DRENARMAGSKALEI 461


>tpg|DAA60011.1| TPA: hypothetical protein ZEAMMB73_897943 [Zea mays]
          Length = 487

 Score =  380 bits (976), Expect = e-103
 Identities = 174/245 (71%), Positives = 213/245 (86%)
 Frame = +2

Query: 32  PSVWMDSWIAMKAVIRVQTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFNNNNAAGLLSL 211
           PS+W DSW+A ++V++V+TFQIIVLQGI+GSLPWTA+VFFTMWFELIGF+NN++A L SL
Sbjct: 242 PSIWRDSWVATRSVMKVKTFQIIVLQGIIGSLPWTAIVFFTMWFELIGFDNNSSAALNSL 301

Query: 212 FAIGCAMGSFLGGVIADKMSRIYPHSGRIMCAQFSTFMGIPFSWFLLIVIPQTINSWFTF 391
           FAIGCA G+F+GGVIAD +S+ +P S R+MCAQFS FMGIPFSW LL VIPQ+++ W+ F
Sbjct: 302 FAIGCASGAFIGGVIADHLSKYFPDSARVMCAQFSAFMGIPFSWILLTVIPQSVDYWYAF 361

Query: 392 AITLFFMGLMISWCATCANNPIFAEVVPTKHRTMIYAFDRAFEGSFSSFAAPIVGILSEK 571
           A+TLFFMG+ ISWCAT ANNP+FAEVVP KHRTMIYAFDRAFEGSF+S AAP VG+++EK
Sbjct: 362 AVTLFFMGITISWCATSANNPMFAEVVPPKHRTMIYAFDRAFEGSFASLAAPAVGLITEK 421

Query: 572 IYGYDPKSVNPLFGSKQEAFALSRGLFSVMALPFGLCSLFYSPLYLTFKRDRESARLASL 751
           IYGYD K+VN   GS + A+ALSRGL ++M +PFG+C LFYSPLYL FK DRE+A+ AS 
Sbjct: 422 IYGYDTKTVNLANGSAEGAYALSRGLLTMMIVPFGVCVLFYSPLYLVFKHDRENAKFASF 481

Query: 752 KEQEM 766
           KEQE+
Sbjct: 482 KEQEL 486


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