BLASTX nr result

ID: Coptis24_contig00011056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011056
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|2...   208   9e-52
ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_004137907.1| PREDICTED: probable LRR receptor-like serine...   202   6e-50
ref|XP_004156665.1| PREDICTED: probable LRR receptor-like serine...   201   8e-50

>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
            predicted protein [Populus trichocarpa]
          Length = 1017

 Score =  214 bits (545), Expect = 1e-53
 Identities = 111/222 (50%), Positives = 144/222 (64%), Gaps = 1/222 (0%)
 Frame = -2

Query: 664  FFQGSVPKSLSSLKGLEYFDLSRNNLSGEIPEFLGEFPLLMLNLSFNQFEGQVPDDGVFG 485
            FFQGS+P S S+L+G++  DLS NNLSG+IP+FL  F LL LNLSFN FEG+VP  G FG
Sbjct: 556  FFQGSIPSSFSTLRGIQKLDLSHNNLSGQIPKFLDTFALLTLNLSFNDFEGEVPTKGAFG 615

Query: 484  NRSSFSLVGNKNLCGGILDLNLPPCT-QKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308
            N ++ S+ GNK LCGGI +L LP C  +K+                              
Sbjct: 616  NATAISVDGNKKLCGGISELKLPKCNFKKSKKWKIPLWLILLLTIACGFLGVAVVSFVLL 675

Query: 307  CRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEELDKV 128
               +  +K  S      E   +++Y  LL+ATNGFSS+NLIG G +GSVY+GIL++ D V
Sbjct: 676  YLSRRKRKEQSSELSLKEPLPKVSYEMLLKATNGFSSDNLIGEGGFGSVYRGILDQDDTV 735

Query: 127  VAVKVLNLPQKGASESFLTECNAMRNLRHRNLLKIVTSCSSM 2
            VA+KVLNL  +GAS+SF+ EC A+RN+RHRNLLKI+TSCSS+
Sbjct: 736  VAIKVLNLQTRGASKSFVAECEALRNVRHRNLLKIITSCSSV 777


>ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|222865759|gb|EEF02890.1|
            predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  208 bits (529), Expect = 9e-52
 Identities = 109/225 (48%), Positives = 146/225 (64%), Gaps = 4/225 (1%)
 Frame = -2

Query: 664  FFQGSVPKSLSSLKGLEYFDLSRNNLSGEIPEFLGEFPLLMLNLSFNQFEGQVPDDGVFG 485
            FFQGS+P S SSL+G+++ DLS NNLSG++P FL   P + LNLS+N FEG+VP  GVF 
Sbjct: 550  FFQGSIPSSFSSLRGIQFLDLSCNNLSGQLPNFLVTIPFISLNLSYNNFEGEVPRKGVFT 609

Query: 484  NRSSFSLVGNKNLCGGILDLNLPPC----TQKTXXXXXXXXXXXXXXXXXXXXXXXXXXX 317
            N S+ S+VGN  LCGGIL+L+LP C     +KT                           
Sbjct: 610  NESAVSVVGNDKLCGGILELHLPECPNKEPKKTKMSHLQYLLAITIPCALVGAITVSSFL 669

Query: 316  XXXCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEEL 137
                ++K  +K  S  TL  E   +++Y  L +AT+GFS+ NLIGVGS+ SVYKG ++E 
Sbjct: 670  FCWFKKK--RKEHSSDTLLKESFPQISYERLFKATDGFSTTNLIGVGSFSSVYKGRIDED 727

Query: 136  DKVVAVKVLNLPQKGASESFLTECNAMRNLRHRNLLKIVTSCSSM 2
              +VA+KVLNL ++GAS+SF  EC A+RN+RHRNL+KI+TSCSS+
Sbjct: 728  GTLVAIKVLNLQRRGASKSFKDECEALRNIRHRNLVKIITSCSSI 772


>ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|222867603|gb|EEF04734.1|
            predicted protein [Populus trichocarpa]
          Length = 970

 Score =  207 bits (526), Expect = 2e-51
 Identities = 108/222 (48%), Positives = 150/222 (67%), Gaps = 2/222 (0%)
 Frame = -2

Query: 661  FQGSVPKSLSSLKGLEYFDLSRNNLSGEIPEFLGEFPLLM-LNLSFNQFEGQVPDDGVFG 485
            F+G +P+SL +L+GLE  DLS NNL+G +PEFLG F +L  LNLS N  EG+V  DG+  
Sbjct: 481  FEGPIPESLETLRGLEELDLSENNLTGRVPEFLGGFSVLRHLNLSHNNLEGEVSRDGILA 540

Query: 484  NRSSFSLVGNKNLCGGILDLNLPPCTQKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC 305
            N S+FS+VGN  LCGGI +L+LPPC++K                               C
Sbjct: 541  NASAFSVVGNDKLCGGIPELHLPPCSRKNPREPLSFKVVIPATIAAVFISVLLCSLSIFC 600

Query: 304  -RRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEELDKV 128
             RRK+ +   +P+    EQ   ++Y+EL+++TNGF++ENLIG GS+GSVYKGIL     +
Sbjct: 601  IRRKLPRNSNTPTP--EEQQVGISYSELIKSTNGFAAENLIGSGSFGSVYKGILSGEGTI 658

Query: 127  VAVKVLNLPQKGASESFLTECNAMRNLRHRNLLKIVTSCSSM 2
            VA+K++NL QKGAS+SF+ ECNA+R++RHRNLLKI+T+CS++
Sbjct: 659  VAIKIMNLLQKGASKSFIDECNALRSIRHRNLLKIITACSTV 700


>ref|XP_004137907.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Cucumis sativus]
          Length = 1041

 Score =  202 bits (513), Expect = 6e-50
 Identities = 107/225 (47%), Positives = 143/225 (63%), Gaps = 5/225 (2%)
 Frame = -2

Query: 661  FQGSVPKSLSSLKGLEYFDLSRNNLSGEIPEFLGEF-PLLMLNLSFNQFEGQVPDDGVFG 485
            F+G++P+SL +LKG+E  +LS NNLSG+IP+FLG+   L  LNLS+N FEGQVP +GVF 
Sbjct: 551  FEGTIPESLGALKGIEELNLSSNNLSGKIPQFLGKLGSLKYLNLSYNNFEGQVPKEGVFS 610

Query: 484  NRSSFSLVGNKNLCGGILDLNLPPC----TQKTXXXXXXXXXXXXXXXXXXXXXXXXXXX 317
            N +  S++GN NLCGG+ +L+LPPC    T                              
Sbjct: 611  NSTMISVIGNNNLCGGLPELHLPPCKYDRTYSRKKFMAPRVLIPIASTVTFLVILVSIIF 670

Query: 316  XXXCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEEL 137
                 RK  +   + S+   E   +++Y EL ++TNGFS EN IG GS+GSVYKGIL   
Sbjct: 671  VCFVLRKSKKDASTNSSSTKEFLPQISYLELSKSTNGFSKENFIGSGSFGSVYKGILSSD 730

Query: 136  DKVVAVKVLNLPQKGASESFLTECNAMRNLRHRNLLKIVTSCSSM 2
              +VA+KVLNL  +GAS+SF+ ECNA+ N+RHRNLLKI+TSCSS+
Sbjct: 731  GSIVAIKVLNLQHQGASKSFVDECNALSNIRHRNLLKIITSCSSI 775


>ref|XP_004156665.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Cucumis sativus]
          Length = 812

 Score =  201 bits (512), Expect = 8e-50
 Identities = 107/225 (47%), Positives = 143/225 (63%), Gaps = 5/225 (2%)
 Frame = -2

Query: 661  FQGSVPKSLSSLKGLEYFDLSRNNLSGEIPEFLGEF-PLLMLNLSFNQFEGQVPDDGVFG 485
            F+G++P+SL +LKG+E  +LS NNLSG+IP+FLG+   L  LNLS+N FEGQVP +GVF 
Sbjct: 353  FKGTIPESLGALKGIEELNLSSNNLSGKIPQFLGKLGSLKYLNLSYNNFEGQVPKEGVFS 412

Query: 484  NRSSFSLVGNKNLCGGILDLNLPPC----TQKTXXXXXXXXXXXXXXXXXXXXXXXXXXX 317
            N +  S++GN NLCGG+ +L+LPPC    T                              
Sbjct: 413  NSTMISVIGNNNLCGGLPELHLPPCKYDRTYSRKKFMAPRVLIPIASTVTFLVILVSIIF 472

Query: 316  XXXCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEEL 137
                 RK  +   + S+   E   +++Y EL ++TNGFS EN IG GS+GSVYKGIL   
Sbjct: 473  VCFVLRKSKKDASTNSSSTKEFLPQISYLELSKSTNGFSKENFIGSGSFGSVYKGILSSD 532

Query: 136  DKVVAVKVLNLPQKGASESFLTECNAMRNLRHRNLLKIVTSCSSM 2
              +VA+KVLNL  +GAS+SF+ ECNA+ N+RHRNLLKI+TSCSS+
Sbjct: 533  GSIVAIKVLNLQHQGASKSFVDECNALSNIRHRNLLKIITSCSSI 577


Top