BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011055
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882555.1| rho GDP-dissociation inhibitor family protei...   155   3e-36
ref|NP_187445.1| Rho GDP-dissociation inhibitor 1 [Arabidopsis t...   152   3e-35
ref|XP_002532283.1| Rho GDP-dissociation inhibitor, putative [Ri...   151   5e-35
ref|XP_004144533.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   150   1e-34
ref|XP_002321172.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>ref|XP_002882555.1| rho GDP-dissociation inhibitor family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328395|gb|EFH58814.1| rho
           GDP-dissociation inhibitor family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 241

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = +2

Query: 2   LSLAILSPGRPNLVLTVPETGKPKGLWFTLKEGSRYNLKFSFKVTNNIVSGLRYTNTVWK 181
           LSLAILSPGRP++VL VPE G PKG+WFTLKEGS+YNLKF+F+V NNIVSGLRYTNTVWK
Sbjct: 111 LSLAILSPGRPDIVLLVPENGNPKGMWFTLKEGSKYNLKFTFQVNNNIVSGLRYTNTVWK 170

Query: 182 TGVKVDNTKEMLGVFSPQEEPYTHVMP 262
           TGVKVD  KEMLG FSPQ EPY HVMP
Sbjct: 171 TGVKVDRAKEMLGTFSPQLEPYNHVMP 197


>ref|NP_187445.1| Rho GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|21759146|sp|Q9SFC6.1|GDIR_ARATH RecName: Full=Rho
           GDP-dissociation inhibitor 1; Short=AtRhoGDI1; Short=Rho
           GDI-1 gi|6648200|gb|AAF21198.1|AC013483_22 putative RHO
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|15866274|gb|AAL10299.1|AF412276_1 Rho
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|21553639|gb|AAM62732.1| putative RHO GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
           gi|26451537|dbj|BAC42866.1| putative RHO
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|28973347|gb|AAO63998.1| putative RHO GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
           gi|332641093|gb|AEE74614.1| Rho GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
          Length = 240

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/86 (81%), Positives = 76/86 (88%)
 Frame = +2

Query: 5   SLAILSPGRPNLVLTVPETGKPKGLWFTLKEGSRYNLKFSFKVTNNIVSGLRYTNTVWKT 184
           SLAI+SPGRP++VL VPE G PKG+WFTLKEGS+YNLKF+F V NNIVSGLRYTNTVWKT
Sbjct: 111 SLAIISPGRPDIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKT 170

Query: 185 GVKVDNTKEMLGVFSPQEEPYTHVMP 262
           GVKVD  KEMLG FSPQ EPY HVMP
Sbjct: 171 GVKVDRAKEMLGTFSPQLEPYNHVMP 196


>ref|XP_002532283.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis]
           gi|223528017|gb|EEF30098.1| Rho GDP-dissociation
           inhibitor, putative [Ricinus communis]
          Length = 246

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/87 (80%), Positives = 79/87 (90%)
 Frame = +2

Query: 2   LSLAILSPGRPNLVLTVPETGKPKGLWFTLKEGSRYNLKFSFKVTNNIVSGLRYTNTVWK 181
           LSL+I+SPGR ++VL+VPE GKPKG WFTLKEGS YNL FSF+V+NNIVSGL+YTNTVWK
Sbjct: 116 LSLSIISPGRSDIVLSVPEDGKPKGSWFTLKEGSHYNLMFSFQVSNNIVSGLKYTNTVWK 175

Query: 182 TGVKVDNTKEMLGVFSPQEEPYTHVMP 262
           TGVKVD+ KEMLG FSPQ EPYTHVMP
Sbjct: 176 TGVKVDSAKEMLGTFSPQPEPYTHVMP 202


>ref|XP_004144533.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus]
           gi|449515967|ref|XP_004165019.1| PREDICTED: rho
           GDP-dissociation inhibitor 1-like [Cucumis sativus]
          Length = 240

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/87 (80%), Positives = 79/87 (90%)
 Frame = +2

Query: 2   LSLAILSPGRPNLVLTVPETGKPKGLWFTLKEGSRYNLKFSFKVTNNIVSGLRYTNTVWK 181
           LSL+I+SP RP+LVL +PE G PKGLWFTLKEGSRY+LKFSF+VTNNIV+GL+YTNTVWK
Sbjct: 110 LSLSIVSPERPDLVLPIPEDGNPKGLWFTLKEGSRYSLKFSFQVTNNIVAGLKYTNTVWK 169

Query: 182 TGVKVDNTKEMLGVFSPQEEPYTHVMP 262
           TGVKVD+ KEMLG FSPQ E YTHVMP
Sbjct: 170 TGVKVDSAKEMLGTFSPQLETYTHVMP 196


>ref|XP_002321172.1| predicted protein [Populus trichocarpa] gi|222861945|gb|EEE99487.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/87 (78%), Positives = 81/87 (93%)
 Frame = +2

Query: 2   LSLAILSPGRPNLVLTVPETGKPKGLWFTLKEGSRYNLKFSFKVTNNIVSGLRYTNTVWK 181
           L+L+ILSPGRP++VL++PE GKPKGLWFTLKEGS ++LKFSF+V+NNIVSGL+YTNTVWK
Sbjct: 78  LNLSILSPGRPDIVLSIPENGKPKGLWFTLKEGSPHSLKFSFQVSNNIVSGLKYTNTVWK 137

Query: 182 TGVKVDNTKEMLGVFSPQEEPYTHVMP 262
           TGVKVD+TKEMLG +SPQ E YTHV P
Sbjct: 138 TGVKVDSTKEMLGTYSPQPEAYTHVNP 164