BLASTX nr result

ID: Coptis24_contig00011051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011051
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm...    91   4e-16
ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    79   9e-13
ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...    78   3e-12
ref|NP_001031993.1| uncharacterized protein [Arabidopsis thalian...    66   8e-09
ref|XP_002865566.1| hypothetical protein ARALYDRAFT_494819 [Arab...    66   1e-08

>ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis]
           gi|223531286|gb|EEF33128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 51/140 (36%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
 Frame = +3

Query: 15  MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXXFAIVILFMWLPKYMDYRTEMEKTEN 194
           M WF   RRGPEWK                     F IVIL +WL +Y DY+ ++  +  
Sbjct: 1   MEWFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAI 60

Query: 195 NFHIFXXXXXXXXXXXXRCLSDNWR-LLRLDQGDSSHQ-----DGCS-PWGVAIXXXXXX 353
           NF +F               S NW    RL Q  S  +     +G S PWG+A       
Sbjct: 61  NFQLFLFLLPVLLILLIASYSTNWMPYFRLRQPRSGRESVRSAEGSSQPWGIAAFVAVLL 120

Query: 354 XMISYQSSFHSRWFKPLWRS 413
            ++SYQSSFHS+WF PLWRS
Sbjct: 121 VLLSYQSSFHSKWFGPLWRS 140


>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
 Frame = +3

Query: 15  MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXXFAIVILFMWLPKYMDYRTEMEKTEN 194
           M WF   RRGPEWK                     F IVI  +WL  Y  Y  ++  +  
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAV 60

Query: 195 NFHIFXXXXXXXXXXXXRCLSDNWRL---LRLDQGDSSHQDGCS-PWGVAIXXXXXXXMI 362
           N  IF               S NW L   LR    DS+ +   S PWG+A+       ++
Sbjct: 61  NLQIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLLLMLL 120

Query: 363 SYQSSFHSRWFKPLWRSY 416
           SYQSSFHS+WF PL  S+
Sbjct: 121 SYQSSFHSKWFGPLRGSH 138


>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 44/131 (33%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
 Frame = +3

Query: 15  MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXXFAIVILFMWLPKYMDYRTEMEKTEN 194
           M WF   RRGPEWK                     F IVI  +WL  Y  Y+ ++  +  
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAI 60

Query: 195 NFHIFXXXXXXXXXXXXRCLSDNWRL---LRLDQGDSS-HQDGCSPWGVAIXXXXXXXMI 362
           N  IF               S NW L   LR  Q DS     G  PWG+AI       ++
Sbjct: 61  NLQIFLVLLPILLILFMASYSTNWLLYYRLRSSQHDSDPRSSGSFPWGIAIFVVVLLMLL 120

Query: 363 SYQSSFHSRWF 395
           SY+S+FHS+WF
Sbjct: 121 SYRSTFHSKWF 131


>ref|NP_001031993.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98962135|gb|ABF59397.1| unknown protein [Arabidopsis
           thaliana] gi|149944379|gb|ABR46232.1| At5g42146
           [Arabidopsis thaliana] gi|332007390|gb|AED94773.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 137

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 42/137 (30%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
 Frame = +3

Query: 15  MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXXFAIVILFMWLPKYMDYRTEMEKTEN 194
           MGWF+++RRG  WK                      AI+ L ++L  Y  Y+ E+EKT  
Sbjct: 1   MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 195 NFHIFXXXXXXXXXXXXRCLSDNWRLL-------RLDQGDSSHQDGCSPWGVAIXXXXXX 353
           N  +F              LS   RLL       R +Q  S   +G  PWGV +      
Sbjct: 61  NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120

Query: 354 XMISYQSSFHSRWFKPL 404
            ++S QS FHS W+  L
Sbjct: 121 LLVSKQSYFHSLWYPNL 137


>ref|XP_002865566.1| hypothetical protein ARALYDRAFT_494819 [Arabidopsis lyrata subsp.
           lyrata] gi|297311401|gb|EFH41825.1| hypothetical protein
           ARALYDRAFT_494819 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
 Frame = +3

Query: 15  MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXXFAIVILFMWLPKYMDYRTEMEKTEN 194
           MGWF+++RRG  WK                      AI+ L ++L  Y  Y+ E+EKT  
Sbjct: 1   MGWFIKERRGGSWKRGWLEETLLTTSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 195 NFHIFXXXXXXXXXXXXRCLSDNWRLL-------RLDQGDSSHQDGCSPWGVAIXXXXXX 353
           N  +F              L+   RLL       R +Q  S   +G  PWGV +      
Sbjct: 61  NLKLFMLFLPILFVFLLLSLNFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120

Query: 354 XMISYQSSFHSRWFKPL 404
            ++S QS FHS W+  L
Sbjct: 121 LLVSKQSYFHSLWYPTL 137


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