BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011049
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1510387A retrotransposon del1-46                                 181   2e-43
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]   166   1e-38
emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]   165   2e-38
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]    162   1e-37
emb|CBI17376.3| unnamed protein product [Vitis vinifera]              159   9e-37

>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score =  181 bits (460), Expect = 2e-43
 Identities = 100/227 (44%), Positives = 135/227 (59%), Gaps = 2/227 (0%)
 Frame = -1

Query: 777 RPHQHGGQTQG--RVYSLTQADAQASDDVIEGTVLLFSTLVHVLIDSGSTHSFISSRIVN 604
           RP QH G+     RV +L   D   S  +I   + +FS+L HVLID+GSTHSFI+ RI+ 
Sbjct: 306 RPPQHQGEGPRVTRVNALIAQDPGVSGTMIRSILSIFSSLCHVLIDTGSTHSFITPRIIK 365

Query: 603 ALELIPFDAGKSLLLSTPLGTRRIPFQVCKSCTIMVDNHEMNVDLTVLELHDFDVIVGMD 424
            LE+     G  L + +P+GT     QVCK C I + N E+ VDL +L+L D D+++GMD
Sbjct: 366 MLEIPVQPLGYILSVISPIGTSTFVNQVCKGCMITIGNQELTVDLIILDLEDPDILLGMD 425

Query: 423 RLSAHHAHVDCFSKTVRFHIPGKPVFKFMGSKFFSAVSILTEGSKRKRQYSLMASMGEEK 244
            L+A+H  +DCFSK V FH+PG P F F G    +     T     +   S +AS+  E 
Sbjct: 426 WLAAYHVVLDCFSKKVTFHLPGIPEFHFHGETQHTFFPTFT----HQPNLSYLASLASEI 481

Query: 243 KEAPQLHTIPIVRQFADVFPKDLPGLPPQRAINFAIDLIPGTAPINI 103
              P      IVR++ +VFP DLPGLPP R I F I+L+PGT+PI+I
Sbjct: 482 NITPSTDLSLIVREYINVFPDDLPGLPPPREIEFQINLLPGTSPISI 528


>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score =  166 bits (419), Expect = 1e-38
 Identities = 93/241 (38%), Positives = 135/241 (56%), Gaps = 13/241 (5%)
 Frame = -1

Query: 813  GETGHIQRFCPK-------------RPHQHGGQTQGRVYSLTQADAQASDDVIEGTVLLF 673
            GE GH+ R CP+             +  +   + QG V+++T  DAQA+ DV+ GT+ + 
Sbjct: 738  GEQGHLIRDCPENRKFITGKPKEENKKDKQKPKAQGWVFAMTHRDAQATSDVVTGTLRIH 797

Query: 672  STLVHVLIDSGSTHSFISSRIVNALELIPFDAGKSLLLSTPLGTRRIPFQVCKSCTIMVD 493
            +    VLID GSTHSF+S      L L        L+++TP+G   +  ++ ++C +M+ 
Sbjct: 798  TLFARVLIDLGSTHSFVSVSFAGLLGLPVASMDFDLIVATPVGDSVVASRMLRNCIVMIG 857

Query: 492  NHEMNVDLTVLELHDFDVIVGMDRLSAHHAHVDCFSKTVRFHIPGKPVFKFMGSKFFSAV 313
              EM +DL +L+L DFDVI+GMD L+++HA VDCF K V F IPG+P F F G       
Sbjct: 858  YREMPIDLVLLDLQDFDVILGMDWLASYHASVDCFEKRVTFSIPGQPKFSFEGKHV---- 913

Query: 312  SILTEGSKRKRQYSLMASMGEEKKEAPQLHTIPIVRQFADVFPKDLPGLPPQRAINFAID 133
                   +  R  S + +    KK+      IPIVR++ DVF +DLPGLPP+R + F ID
Sbjct: 914  ------DRPLRMISTLRASSLLKKD------IPIVREYPDVFLEDLPGLPPEREMEFTID 961

Query: 132  L 130
            L
Sbjct: 962  L 962



 Score =  136 bits (342), Expect = 1e-29
 Identities = 76/189 (40%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
 Frame = -1

Query: 702 DVIEGTVLLFSTLVHVLIDSGSTHSFISSRIVNALELIPFDAGKSLLLSTPLGTRRIPFQ 523
           D   GT+ + +    VLID GSTHSF+S      L L        L+++TP+G   +  +
Sbjct: 82  DGAHGTLRIHTLFARVLIDPGSTHSFVSVSFAGLLGLPVASMDFDLIVATPVGDFVVASR 141

Query: 522 VCKSCTIMVDNHEMNVDLTVLELHDFDVIVGMDRLSAHHAHVDCFSKTVRFHIPGKPVFK 343
           + ++C +M+   EM VDL +L+L DFDVI+GMD L+++HA +DCF K V F IPG+P F 
Sbjct: 142 MLRNCIVMIGYREMLVDLVLLDLQDFDVILGMDWLTSYHASIDCFEKRVTFSIPGQPKFS 201

Query: 342 FMG---SKFFSAVSILTEGSKRKRQ-YSLMASMGEEKKEAPQLHTIPIVRQFADVFPKDL 175
           F G    +    +S L   S  K+     +AS+   + +  +L  IPIVR++ DVF +DL
Sbjct: 202 FEGKHVDRPLRMISALRASSLLKKGCQGFLASVMSNESDL-KLEDIPIVREYPDVFLEDL 260

Query: 174 PGLPPQRAI 148
           PGLPP+R +
Sbjct: 261 PGLPPERGM 269


>emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]
          Length = 1194

 Score =  165 bits (418), Expect = 2e-38
 Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 5/222 (2%)
 Frame = -1

Query: 756 QTQGRVYSLTQADAQASDDVIEGTVLLFSTLVHVLIDSGSTHSFISSRIVNALELIPFDA 577
           + QGRV+++T  DAQ + DV+ GT+ + +     LID GSTHSF+S      L +   + 
Sbjct: 182 RAQGRVFAMTHRDAQTTFDVVIGTLQIHTLFARALIDPGSTHSFVSVSFAGLLGMSIDNM 241

Query: 576 GKSLLLSTPLGTRRIPFQVCKSCTIMVDNHEMNVDLTVLELHDFDVIVGMDRLSAHHAHV 397
              L ++ PLG   +  ++ + C +M+   EM VDL +L+L DFDVI+GM+ L+++HA +
Sbjct: 242 DFDLFVAIPLGDSVVVNKILRDCIVMIGYREMTVDLVLLDLQDFDVILGMNWLASYHASI 301

Query: 396 DCFSKTVRFHIPGKPVFKFMG---SKFFSAVSILTEGSKRKR--QYSLMASMGEEKKEAP 232
           DCF K V F+IP +P F F G    K    +S L   S  ++  Q  L   M EE     
Sbjct: 302 DCFGKIVTFNIPSRPDFGFEGKHVDKPLHMISALQASSLLRKGCQGFLAYVMNEENN--L 359

Query: 231 QLHTIPIVRQFADVFPKDLPGLPPQRAINFAIDLIPGTAPIN 106
           +L  IPIVR + DVFP DLPGLPP++ + F ID+  GT PI+
Sbjct: 360 KLEDIPIVRDYPDVFPDDLPGLPPEKEVEFTIDVALGTTPIS 401


>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
          Length = 871

 Score =  162 bits (410), Expect = 1e-37
 Identities = 101/267 (37%), Positives = 143/267 (53%), Gaps = 10/267 (3%)
 Frame = -1

Query: 876  YHVQRCRVRDRLVNLRLHVMGGETGHIQRFCPKRP------HQHGGQTQGRVYSLTQADA 715
            +H+ RC     L   R      + GH    CP RP         G   QGRV++  + +A
Sbjct: 566  HHLGRC-----LFGTRTCFKCRQEGHTADRCPLRPTGIAQNQGAGAPLQGRVFATNRTEA 620

Query: 714  QASDDVIEGTVLLFSTLVHVLIDSGSTHSFISSRIVNALELIPFDAGKSLLLSTPLGTRR 535
            + +  V+ GT+ +      VL DSGS+HSFISS  V+   L        L +STP G   
Sbjct: 621  EKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECM 680

Query: 534  IPFQVCKSCTIMVDNHEMNVDLTVLELHDFDVIVGMDRLSAHHAHVDCFSKTVRFHIPGK 355
            +  +  K+C I +  H + V L VL++ DFDVI+GMD L+A+HA +DC  K V F+ P  
Sbjct: 681  LSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSM 740

Query: 354  PVFKFM--GSKFFSAVSILTEGSKRKRQ--YSLMASMGEEKKEAPQLHTIPIVRQFADVF 187
              FKF   GSK    V      SK   Q  + ++AS+ + ++    L + P+VR + DVF
Sbjct: 741  ASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVF 800

Query: 186  PKDLPGLPPQRAINFAIDLIPGTAPIN 106
            P++LPGLPP R + FAI+L PGT PI+
Sbjct: 801  PEELPGLPPHREVEFAIELEPGTVPIS 827


>emb|CBI17376.3| unnamed protein product [Vitis vinifera]
          Length = 1567

 Score =  159 bits (403), Expect = 9e-37
 Identities = 85/224 (37%), Positives = 133/224 (59%), Gaps = 4/224 (1%)
 Frame = -1

Query: 762  GGQTQGRVYSLTQADAQASDDVIEGTVLLFSTLVHVLIDSGSTHSFISSRIVNALELIPF 583
            G Q  GRV++LT  + +    ++EG +L++ST V VL D+G+THSFIS+   NAL L   
Sbjct: 396  GRQAAGRVFALTPTEPEEDALLVEGMILVYSTWVRVLFDTGATHSFISASCANALGLKSE 455

Query: 582  DAGKSLLLSTPLGTRRIPFQVCKSCTIMVDNHEMNVDLTVLELHDFDVIVGMDRLSAHHA 403
                 LL+ +P+GT     ++CK C I + +  +NVDL +L++  +DVI+GMD L+ + A
Sbjct: 456  RVENLLLIESPMGTNSRVDRICKGCVITLADRALNVDLRILDMTGYDVILGMDWLAVYRA 515

Query: 402  HVDCFSKTVRFHIPGKPVFKFMGSKF----FSAVSILTEGSKRKRQYSLMASMGEEKKEA 235
             +DC  + + F +P      F+G K     FS      +   RK   + +A +  ++K  
Sbjct: 516  VIDCHRRRIIFCLPEGFEVCFVGGKCVSLPFSQSDPCYQYVLRKGSINFLACLRGKEKAQ 575

Query: 234  PQLHTIPIVRQFADVFPKDLPGLPPQRAINFAIDLIPGTAPINI 103
              +  IP+VR+F DVFP +LPGLPP R  +F+I++ PGT PI++
Sbjct: 576  KDITEIPMVRKFQDVFPDELPGLPPHREFDFSIEVYPGTDPISV 619