BLASTX nr result

ID: Coptis24_contig00011041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011041
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]   158   3e-36
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...   132   1e-28
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...   131   3e-28
ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782...   130   1e-27
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...   128   4e-27

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score =  158 bits (399), Expect = 3e-36
 Identities = 80/163 (49%), Positives = 107/163 (65%), Gaps = 6/163 (3%)
 Frame = +2

Query: 632  SRDELLKWTRELGKSVGTVIVIKKSDLGSVAGRTPRIVFGCERFGKY------KAKKGSK 793
            SR+ L++W RE GK  G VI+I+++D+G+     PRI F CER G Y      K ++G K
Sbjct: 15   SREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGAYRHTGXDKGEEGKK 74

Query: 794  QQLPTEQTKSKKCDCPFVLKGIKMPKEDQWVVKVDCGLHNHPLGLRPEGHSYAGKLTAEE 973
            ++   + T +KKC CPF L+GIK+P  D+W + V CG HNHP G   EGHS+AG+L+ EE
Sbjct: 75   KR-KRKATGTKKCGCPFSLRGIKLPLADEWTLVVKCGTHNHPGGQHVEGHSFAGRLSMEE 133

Query: 974  EAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLK 1102
              I+ ++S S +KPKE+LN LKERD  N TT   IYN R K K
Sbjct: 134  IGILIDLSKSQMKPKEILNTLKERDGLNCTTIKGIYNARHKHK 176


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score =  132 bits (333), Expect = 1e-28
 Identities = 66/173 (38%), Positives = 105/173 (60%), Gaps = 7/173 (4%)
 Frame = +2

Query: 632  SRDELLKWTRELGKSVGTVIVIKKSDLGSVAGRTPR-------IVFGCERFGKYKAKKGS 790
            SR+ +L W R++ K  G V++I +S+  +   R+ R       ++ GC+R GKY+     
Sbjct: 38   SREAMLNWARDVAKENGFVLIILRSETSTTCTRSTRCNQRKTFVIMGCDRSGKYRGPY-- 95

Query: 791  KQQLPTEQTKSKKCDCPFVLKGIKMPKEDQWVVKVDCGLHNHPLGLRPEGHSYAGKLTAE 970
            K +L  + + ++KC+CPF LKG  + K + W+VKV CG HNH L     GH YAG+L+AE
Sbjct: 96   KNELSRKVSGTRKCECPFKLKGKALKKAEGWIVKVMCGCHNHDLEETLVGHPYAGRLSAE 155

Query: 971  EEAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKLTRKSRKSQ 1129
            E+++V  ++ S +KPK++L  LK+ +  N TT   IYN RQ  + ++K  + Q
Sbjct: 156  EKSLVDALTKSMMKPKDILLTLKDHNMGNVTTIKQIYNARQAYRSSKKGSEMQ 208


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
            gi|355493993|gb|AES75196.1| Galactose-1-phosphate
            uridylyltransferase [Medicago truncatula]
          Length = 679

 Score =  131 bits (330), Expect = 3e-28
 Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
 Frame = +2

Query: 632  SRDELLKWTRELGKSVGTVIVIKKSDLGSVA---GRTPRIVFGCERFGKYKAKKGSKQQL 802
            +R+ LL W R +G+  G  ++I++SD G +    GR   ++ GCER GKY+  K +  + 
Sbjct: 512  TREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDALAR- 570

Query: 803  PTEQTKSKKCDCPFVLKGIKMPKEDQWVVKVDCGLHNHPLGLRPEGHSYAGKLTAEEEAI 982
               +T +KKC CPF L+G  +   D W V V CG HNH +     G +YAG+L+ EE+++
Sbjct: 571  ---KTGTKKCGCPFRLRGRPVRNGDGWKVNVVCGFHNHEVIETAIGSTYAGRLSGEEKSL 627

Query: 983  VREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKLTR 1111
            V +++ S  KPK++L  LKER+  N T+   IYN+RQ+LK +R
Sbjct: 628  VDDLTRSNYKPKDILQTLKERNEENLTSIKQIYNLRQQLKRSR 670


>ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782358 [Glycine max]
          Length = 1403

 Score =  130 bits (326), Expect = 1e-27
 Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
 Frame = +2

Query: 632  SRDELLKWTRELGKSVGTVIVIKKSDLGS------VAGRTPRIVFGCERFGKYKAKKGSK 793
            SRD +L W RE+ K  G V+ I +S+  +      + G+T  ++ GCER GKY+  K + 
Sbjct: 809  SRDAVLNWAREVAKENGFVLTILRSETHTGSNKKNIRGKT-YVILGCERSGKYRPYKNTL 867

Query: 794  QQLPTEQTKSKKCDCPFVLKGIKMPKEDQWVVKVDCGLHNHPLG-LRPEGHSYAGKLTAE 970
             ++    T SKKC+CPF LKG  + K++ W+VKV CG HNH LG     GHSYAG+LTAE
Sbjct: 868  SKV----TSSKKCECPFKLKGKALNKDEGWIVKVMCGYHNHDLGETLVVGHSYAGRLTAE 923

Query: 971  EEAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKLTRKSRKSQ 1129
            E+++V +M+   ++P+ +L  LK  D +N TT   IYN RQ  + ++K  +++
Sbjct: 924  EKSLVIDMTKKMVEPRNILLTLK--DHNNDTTIRHIYNARQAYRSSQKGPRTE 974


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score =  128 bits (321), Expect = 4e-27
 Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 10/195 (5%)
 Frame = +2

Query: 575  SISEKIDMXXXXXXXXXXNSRDELLKWTRELGKSVGTVIVIKKSDLGSVAGRTPR----- 739
            +I + +D            SR+ +L W R++ K  G V++I +S+  + + +  R     
Sbjct: 19   AIDKSVDCSDAFNTTEVFPSREAMLNWARDVAKENGFVLIILRSETSTRSTKYTRSTRCN 78

Query: 740  -----IVFGCERFGKYKAKKGSKQQLPTEQTKSKKCDCPFVLKGIKMPKEDQWVVKVDCG 904
                 ++ GC+R GKY+     K  L  + + ++KC+CPF LKG  + K + W+VKV CG
Sbjct: 79   QRKTFVIMGCDRSGKYRGPY--KNALSRKVSGTRKCECPFKLKGKALKKAEGWIVKVMCG 136

Query: 905  LHNHPLGLRPEGHSYAGKLTAEEEAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYN 1084
             HNH L     GH YAG+L+AEE+++V  ++ S +KPK++L  LK+ +  N TT   IYN
Sbjct: 137  CHNHDLEETLVGHPYAGRLSAEEKSLVDALTKSMMKPKDILLTLKDHNMGNVTTIKQIYN 196

Query: 1085 IRQKLKLTRKSRKSQ 1129
             RQ  + ++K  + Q
Sbjct: 197  ARQAYRSSKKGSEMQ 211


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