BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011040
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   144   2e-32
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   139   3e-31
ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   139   5e-31
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...   122   5e-26

>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  144 bits (362), Expect = 2e-32
 Identities = 90/168 (53%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
 Frame = +1

Query: 133 TMITKIPNLCHMRRLFFCHRTTLQRSLCTATATXXXXXXXXXXXXXXXXXXXTQTQKLER 312
           ++ T+IP    +R LFF       R+LC+A+AT                     TQKLER
Sbjct: 3   SITTRIPYKTLVRPLFFAQ----SRNLCSASAT---------------------TQKLER 37

Query: 313 IADEILDLNKLERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXXKA----- 477
           IADE+LDL KLER+DY ILF  KLGLN YGP +S L                 KA     
Sbjct: 38  IADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAKAAEKTA 97

Query: 478 FDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 621
           FDIKLEKFDAA KIKIIKEV TFTDLG +EAKDLVEK PVVLKKGVTK
Sbjct: 98  FDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTK 145


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  139 bits (351), Expect = 3e-31
 Identities = 87/157 (55%), Positives = 95/157 (60%), Gaps = 5/157 (3%)
 Frame = +1

Query: 166 MRRLFFCHRTTLQRSLCTATATXXXXXXXXXXXXXXXXXXXTQTQKLERIADEILDLNKL 345
           +R LFF       R+LC+A+AT                     TQKLERIADE+LDL KL
Sbjct: 464 VRPLFFAQ----SRNLCSASAT---------------------TQKLERIADELLDLTKL 498

Query: 346 ERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXXKA-----FDIKLEKFDAA 510
           ER+DY ILF  KLGLN YGP +S L                 KA     FDIKLEKFDAA
Sbjct: 499 ERYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAKAAEKTAFDIKLEKFDAA 558

Query: 511 VKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 621
            KIKIIKEV TFTDLG +EAKDLVEK PVVLKKGVTK
Sbjct: 559 AKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTK 595


>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  139 bits (349), Expect = 5e-31
 Identities = 75/113 (66%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
 Frame = +1

Query: 292 QTQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXX 471
           +TQKLERIADE+LDL K+ERHDY ILF +K+GLN YGP +S L                 
Sbjct: 36  RTQKLERIADELLDLTKIERHDYAILFRYKMGLNKYGPAVSGLSAPGSAAAGSAAAETKE 95

Query: 472 K---AFDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 621
                FDIKLEKFDAA KIKIIKEV TFTDLG +EAKDLVEKVPVVLKKGVTK
Sbjct: 96  AEKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTK 148


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  136 bits (342), Expect = 3e-30
 Identities = 74/117 (63%), Positives = 81/117 (69%), Gaps = 6/117 (5%)
 Frame = +1

Query: 289 TQTQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRL------DXXXXXXXXX 450
           TQTQKLERIAD +LDL K+ERHDY ILF HK+GL  YGP +S                  
Sbjct: 37  TQTQKLERIADVLLDLTKIERHDYAILFRHKMGLGRYGPAVSGAILSGPAAPGSASGDVK 96

Query: 451 XXXXXXXKAFDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 621
                   AFDIKLEKFDAA KIK+IKEV TFTDLG +EAKDLVEKVPVVLKKG+TK
Sbjct: 97  TAAAAEKTAFDIKLEKFDAAAKIKVIKEVRTFTDLGLKEAKDLVEKVPVVLKKGLTK 153


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  122 bits (306), Expect = 5e-26
 Identities = 59/110 (53%), Positives = 78/110 (70%)
 Frame = +1

Query: 292 QTQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXX 471
           +T+KLERIAD++L+LN++E +DY ILF HKLGLN YG  ++                   
Sbjct: 38  RTKKLERIADDLLNLNRIELYDYSILFSHKLGLNRYGSAVAVAGSDGEASGSTETKTAEK 97

Query: 472 KAFDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 621
            AFD+KLEKF+ A KIK+IKE+  FTDLG +EAK+LVEK PV++KKG+TK
Sbjct: 98  TAFDVKLEKFETASKIKVIKEIRAFTDLGLKEAKELVEKAPVIVKKGLTK 147