BLASTX nr result
ID: Coptis24_contig00011018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011018
(1334 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|2... 284 3e-74
ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [... 257 4e-66
ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [... 254 3e-65
ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [... 252 1e-64
ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [... 252 2e-64
>ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|222865979|gb|EEF03110.1|
predicted protein [Populus trichocarpa]
Length = 527
Score = 284 bits (727), Expect = 3e-74
Identities = 180/422 (42%), Positives = 255/422 (60%), Gaps = 38/422 (9%)
Frame = +1
Query: 181 MEVSRRKSGPR-NVVAGSVWESRMKMDEVKGGIKVFNGGEKHIEESNNVDEGGDVLVLPM 357
M+V RR++G + +VVAGSVWE+RMK+DEVKGGIKVFNG E+++EES + GDV +
Sbjct: 1 MDVGRRRAGVKTSVVAGSVWENRMKLDEVKGGIKVFNG-EENVEESRS--SNGDVGKKMV 57
Query: 358 NKSLETNNQSTVVREKRRTWKAEPVEV----------------IGSSPI----------Q 459
+ + S + KR+TWK+E ++ IG P+ Q
Sbjct: 58 KRGQTGTSASVAMSGKRKTWKSESLDELRKVKSDSVKVAEQSEIGKDPVLDGGVERNSVQ 117
Query: 460 PNKFTSKSYKELSASSVDGIDKSPILIKHTRSVSHKDFNETCKD------FGVCKXXXXX 621
S++ K L SV+GI+KSP I+ T S ETCK+
Sbjct: 118 LRMAKSEADKVLD-ESVNGIEKSPPEIEETGS------EETCKESDNPPPLDDDDDVVID 170
Query: 622 XXXXXXXXXXXXXXXXXXXXXXXNKSFDVKEVDVLEQKPNKVVREEKKVNHQIYRKSNSI 801
KS D+KE+++ E+KP KV E+ + N++ S+ +
Sbjct: 171 GDEDIEGDEDEEEIEEEIEIQIEKKSLDIKEINIAEEKPKKV--EKNQFNNRTAPASSIV 228
Query: 802 SPNVKKLPPLFRDSPLIEQEVKKPP--PITLAEQPERFPE--KQSKLQSFVDLVMWKDIS 969
+ K+ PP+ + + L + K P I +A + + F E + SKLQ+ VDLVMW+D+S
Sbjct: 229 N---KQPPPVIKRATLYQNLAKAAPNPSIPVANEYQNFKETRRHSKLQNLVDLVMWRDVS 285
Query: 970 KSAFIFGLGTFILISSSYTEDLDLSLISVISYMGLVYLAAIFVYKSVLCRGVTDV-ENSI 1146
+S FG+GTFI+ISSSYT+DL++S ISV+SY+GLVYLA IF+Y+S++CRGV D+ ++
Sbjct: 286 RSTLAFGMGTFIIISSSYTKDLNVSFISVMSYLGLVYLATIFLYRSLICRGVIDIDDDGS 345
Query: 1147 HLVGEEEAIWLLKLILPYLNETLLELKAIFSGDPATTMKLAVLLFVLARCGSFITISKMV 1326
+++GE EAIWLLKL+LPYLNE LL+++A+FSGDPATTMK+AVLLFV ARCGS ITI KM
Sbjct: 346 YVLGEGEAIWLLKLVLPYLNECLLKIRALFSGDPATTMKMAVLLFVFARCGSSITIWKMA 405
Query: 1327 KL 1332
+L
Sbjct: 406 RL 407
>ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
Length = 608
Score = 257 bits (657), Expect = 4e-66
Identities = 192/487 (39%), Positives = 250/487 (51%), Gaps = 104/487 (21%)
Frame = +1
Query: 181 MEVSRRKSGPR-NVVAGSVWESRMKMDEVKGGIKVFNGGEKHIEESNN----VDEG--GD 339
M+VSRR+ G R +VVAGSVWESRMK DEV GG+KVF+G E+ EE N + G G
Sbjct: 1 MDVSRRRVGVRCSVVAGSVWESRMKSDEVGGGVKVFSG-EQSAEEGGNDGTRLKRGQIGS 59
Query: 340 VLVLPMNKS-----LETN----------------------------------NQSTVVRE 402
V+ K+ LE N +S +
Sbjct: 60 VVASGKRKTWKSEGLENNLIQIARGKAEPQKNGSNSSSSQQCKDLNISSDSVKKSPIPAR 119
Query: 403 KRRTWKAEPVEVI-------------------GSSPIQPNKFTSKSYKELSASSVDGIDK 525
K+R+ EP E G + IQP K + L+ S DG+
Sbjct: 120 KKRSEVGEPFEKNVGKLRKNKSDSVKNVDDGNGGNAIQPRKDKPELDHVLNESRNDGLAG 179
Query: 526 SPILIKHTRSVSHKDFNETCKDFGVC---------------KXXXXXXXXXXXXXXXXXX 660
++ D + CKDFGVC K
Sbjct: 180 GSG--RNVIDNGKNDSDGNCKDFGVCLEKVISSNSDNVGMIKCSPVHVDGDFDDVVVDDE 237
Query: 661 XXXXXXXXXXNK-SFDVKEVDVLEQK---------------PNKVVREE--KKV---NHQ 777
K SFDVKE+ V E K K+V E KKV N Q
Sbjct: 238 EEDEEIDVEMEKGSFDVKEISVPESKVVNEPERKEVVNVPAKQKIVNEPEPKKVVTTNRQ 297
Query: 778 IYRKSN---SISPNVKKLPPLFRDSPLIEQEVKKPPPITLAEQPERFPEKQSKLQSFVDL 948
++K+ SI VK PP+ R I Q K I AE+ FP+ Q+KLQS VDL
Sbjct: 298 FHQKNERPVSIPIAVKPSPPI-RKLSTIHQNFSKADSIPKAEEYYCFPQSQNKLQSLVDL 356
Query: 949 VMWKDISKSAFIFGLGTFILISSSYTEDLDLSLISVISYMGLVYLAAIFVYKSVLCRGVT 1128
+MW+++S+SAFIFG+GTF ++SSSY +D++LSLISV+SY+GLVYLA IF+Y+S++CRGV
Sbjct: 357 IMWREVSRSAFIFGIGTFTIVSSSYAKDINLSLISVMSYIGLVYLAVIFLYRSLICRGVI 416
Query: 1129 DVENSIHLVGEEEAIWLLKLILPYLNETLLELKAIFSGDPATTMKLAVLLFVLARCGSFI 1308
DV+++ +++GEEEAIW+L+LILPYLNE L +L+A+FSGDP TT+KLAVLLFVLARCGS I
Sbjct: 417 DVDDTNYVLGEEEAIWVLRLILPYLNEFLSKLRAMFSGDPGTTIKLAVLLFVLARCGSSI 476
Query: 1309 TISKMVK 1329
TI KM K
Sbjct: 477 TIWKMAK 483
>ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
Length = 555
Score = 254 bits (650), Expect = 3e-65
Identities = 177/461 (38%), Positives = 246/461 (53%), Gaps = 78/461 (16%)
Frame = +1
Query: 181 MEVSRRKSG--PRNVVAGSVWESRMKMDEVKGGIKVFNGGEKHIEESNNVDEGGDVLVLP 354
M+V RRK G +VV+GSVWESRMKMDEVKGGIKVFNG E + ++ G V+
Sbjct: 1 MDVGRRKVGVSSNSVVSGSVWESRMKMDEVKGGIKVFNG------EDGSSNKEGKVVTRS 54
Query: 355 MNK--SLETNNQSTV-----------------VREKR-----------RTWKAEPVEVIG 444
M+K SLE + +S + +R+ R R K+E VE
Sbjct: 55 MSKRISLEGSEKSPIQIGKGKRNCDETKSPIQLRKMRSEEIERSPNQLRKSKSEMVERNE 114
Query: 445 SSPIQPNKFTSKSYKELSASSVDGIDKSPILI--------KHTR---SVSHKDFNET--- 582
+P+Q K S+S K + VD K+ +++ +H + S S+++ +E
Sbjct: 115 KTPVQLRKVKSESVKTI----VDDNAKAIVVVGGKNGGNSEHLQCPESESNEELSEIEKG 170
Query: 583 ------------------CKDFGVCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNK---- 696
CK+FGVC +
Sbjct: 171 IHGSVKEIEKPQVENETYCKEFGVCLISTMAGPIKPTQEVSINDNENEANEEEETEEEEE 230
Query: 697 ----------SFDVKEVDVLEQKPNKVVREEKKVNHQIYRKSNSISPNVKKLPPLFRDSP 846
SFD+KE+++ E P K+V E KK HQIY K P+ K
Sbjct: 231 DGDDNEIEKESFDIKEINLPE--PKKIVNEVKKF-HQIYEKP---VPHSSK--------- 275
Query: 847 LIEQEVKKPPPITLAEQPERFPEKQSKLQSFVDLVMWKDISKSAFIFGLGTFILISSSYT 1026
P +++ F EK +KLQS VDL+MWK++S+SAF+FG+G+F++IS SYT
Sbjct: 276 ----------PTYTSKEYHNFQEKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISCSYT 325
Query: 1027 EDLDLSLISVISYMGLVYLAAIFVYKSVLCRGVTDVENSIHLVGEEEAIWLLKLILPYLN 1206
D+++S ISV+SY+GL YLAA F+Y+S++CRG D+EN ++VGEEEAIW+LKL+LPYLN
Sbjct: 326 NDINISFISVVSYVGLFYLAATFLYRSIICRGAIDMENVRNVVGEEEAIWVLKLLLPYLN 385
Query: 1207 ETLLELKAIFSGDPATTMKLAVLLFVLARCGSFITISKMVK 1329
E LL+++A+F GDPATTMKLAVLLF ARCGS IT+ K+ K
Sbjct: 386 EFLLKVRALFCGDPATTMKLAVLLFASARCGSSITVWKVAK 426
>ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
Length = 555
Score = 252 bits (644), Expect = 1e-64
Identities = 177/461 (38%), Positives = 246/461 (53%), Gaps = 78/461 (16%)
Frame = +1
Query: 181 MEVSRRKSG--PRNVVAGSVWESRMKMDEVKGGIKVFNGGEKHIEESNNVDEGGDVLVLP 354
M+V RRK G +VV+GSVWESRMKMDEVKGGIKVFNG E + ++ G V+
Sbjct: 1 MDVGRRKVGVSSNSVVSGSVWESRMKMDEVKGGIKVFNG------EDGSSNKEGKVVTRS 54
Query: 355 MNK--SLETNNQSTV-----------------VREKR-----------RTWKAEPVEVIG 444
M+K SLE + +S + +R+ R R K+E VE
Sbjct: 55 MSKRISLEGSEKSPIQIGKGKRNCDETKSPIQLRKMRSEEIERSPNQLRKSKSEMVERNE 114
Query: 445 SSPIQPNKFTSKSYKELSASSVDGIDKSPILI--------KHTR---SVSHKDFNET--- 582
+P+Q K S+S K + VD K+ +++ +H + S S+++ +E
Sbjct: 115 KTPVQLRKVKSESVKTI----VDDNAKAIVVVGGKNGGNSEHLQCPESESNEELSEIEKG 170
Query: 583 ------------------CKDFGVCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNK---- 696
CK+FGVC +
Sbjct: 171 IHGSVKEIEKPQVENETYCKEFGVCLISTMAGPIKPTQEVSINDNENEANEEEETEEEEE 230
Query: 697 ----------SFDVKEVDVLEQKPNKVVREEKKVNHQIYRKSNSISPNVKKLPPLFRDSP 846
SFD+KE+++ E P K+V E KK HQIY K P+ K
Sbjct: 231 DGDDNEIEKESFDIKEINLPE--PKKIVNEVKKF-HQIYEKP---VPHSSK--------- 275
Query: 847 LIEQEVKKPPPITLAEQPERFPEKQSKLQSFVDLVMWKDISKSAFIFGLGTFILISSSYT 1026
P +++ F EK +KLQS VDL+MWK++S+SAF+FG+G+F++ISSSYT
Sbjct: 276 ----------PTYTSKEYHNFQEKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISSSYT 325
Query: 1027 EDLDLSLISVISYMGLVYLAAIFVYKSVLCRGVTDVENSIHLVGEEEAIWLLKLILPYLN 1206
D+++S ISV+SY+GL YLAA F+Y+S++ RG D+EN ++VGEEEAIW+LKL+LPYLN
Sbjct: 326 NDINISFISVVSYVGLFYLAATFLYRSIIYRGAIDMENVRNVVGEEEAIWVLKLLLPYLN 385
Query: 1207 ETLLELKAIFSGDPATTMKLAVLLFVLARCGSFITISKMVK 1329
E LL+++A+F GDPATTMKLAVLLF ARCGS IT+ K+ K
Sbjct: 386 EFLLKVRALFCGDPATTMKLAVLLFASARCGSSITVWKVAK 426
>ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
Length = 589
Score = 252 bits (643), Expect = 2e-64
Identities = 185/474 (39%), Positives = 253/474 (53%), Gaps = 91/474 (19%)
Frame = +1
Query: 181 MEVSRRKSGPR-NVVAGSVWESRMKMDEVKGGIKVF----------NGG----------- 294
M+VSRR+ G R +VVAGSVWESRMK DEV GG+KVF NGG
Sbjct: 1 MDVSRRRLGVRCSVVAGSVWESRMKSDEVGGGVKVFTGEQSAEEGGNGGTCRLKRSQIGS 60
Query: 295 ----------------EKHIE--------ESNNVDEGGDVLVLPMNKSLETNNQSTVVRE 402
HI+ + N + +N S ++ +S +
Sbjct: 61 VVATGKRKTWKSEGLENNHIQIAIGKSEPQKNGGNSSSSQQCKDLNISSDSIKKSPIQAR 120
Query: 403 KRRTW---------------KAEPVEVIGS----SPIQPNKFTSKSYKELSASSVDGI-- 519
K+R+ K++ ++ +G + IQP K S+ L S DG+
Sbjct: 121 KKRSGVGESFEKNAGKLRKNKSDLIKNVGDGDAGNAIQPRKGKSELDHVLDESRNDGLAG 180
Query: 520 DKSPILIKHTRSVSHKDFNETCKDFGVC---------------KXXXXXXXXXXXXXXXX 654
+ ++I + ++ D +E CKDFGVC K
Sbjct: 181 GSARVVILNGKN----DCDENCKDFGVCLEKVISSNSGNVGMIKCSPVHVDDDDEDDVVE 236
Query: 655 XXXXXXXXXXXXNK-SFDVKEVDVLEQKPNKVVRE-EKKVNHQIYRKSNSIS-PNVKKLP 825
K SFDVKE+ V E +KVV E E+K + K ++ P KK+
Sbjct: 237 EEVDDEEIDIEMEKGSFDVKEISVPE---SKVVNETERKEVVNVAAKQKIVNEPEPKKVV 293
Query: 826 PLFRDSPLIEQEVKKPPPITL------AEQPERFPEKQSKLQSFVDLVMWKDISKSAFIF 987
R Q+ ++P I L AE+ FP+ Q+KLQS VDL+MW+DIS+SAFIF
Sbjct: 294 STNRQ---FHQKNERPVLIGLYYSVPKAEEYCSFPQSQNKLQSLVDLIMWRDISRSAFIF 350
Query: 988 GLGTFILISSSYTEDLDLSLISVISYMGLVYLAAIFVYKSVLCRGVTDVENSIHLVGEEE 1167
G+GTF ++ SSY +D++LSLISV+SY+GLVYLA IF+Y+S++CRGV DVE++ +++ EEE
Sbjct: 351 GIGTFAIVLSSYAKDINLSLISVMSYIGLVYLAVIFLYRSLICRGVIDVEDTNYVLREEE 410
Query: 1168 AIWLLKLILPYLNETLLELKAIFSGDPATTMKLAVLLFVLARCGSFITISKMVK 1329
AIW+LKLILPYLNE L +L+A+FSGDP TT+KLAVLLFVLARCGS+ITI KM K
Sbjct: 411 AIWVLKLILPYLNEFLSKLRAMFSGDPGTTIKLAVLLFVLARCGSYITIWKMAK 464