BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011013
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   281   4e-81
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   156   5e-51
gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33] gi|1...    75   2e-22
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi...    89   9e-19
emb|CBA31938.1| hypothetical protein Csp_D29620 [Curvibacter put...    90   8e-16

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  281 bits (720), Expect(2) = 4e-81
 Identities = 134/136 (98%), Positives = 135/136 (99%)
 Frame = -2

Query: 484  YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 305
            YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG
Sbjct: 935  YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 994

Query: 304  RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRVTHPF 125
            RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPR+THPF
Sbjct: 995  RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1054

Query: 124  ATLF*TVPTSWARQAT 77
            ATLF TVPTSWARQAT
Sbjct: 1055 ATLFSTVPTSWARQAT 1070



 Score = 47.0 bits (110), Expect(2) = 4e-81
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -1

Query: 71   LGASFPSAQLP*NNVRLACVKHI 3
            LGASFPSAQLP NNVRLACVKHI
Sbjct: 1073 LGASFPSAQLPENNVRLACVKHI 1095



 Score =  106 bits (264), Expect = 8e-21
 Identities = 53/68 (77%), Positives = 54/68 (79%)
 Frame = -2

Query: 874  PVNSFEFRSCDRTPQAECFTR*LGP*SA*TKGEHSSFTAWTTRVSNPVRSPCFRTPASVG 695
            PVNSFEFRSCDRTP+              TKGEHSSFTAWTTRVSNPVRSPCFRTPASVG
Sbjct: 874  PVNSFEFRSCDRTPE--------------TKGEHSSFTAWTTRVSNPVRSPCFRTPASVG 919

Query: 694  TQRAAFAF 671
            TQRAAFAF
Sbjct: 920  TQRAAFAF 927


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score =  156 bits (395), Expect(2) = 5e-51
 Identities = 84/118 (71%), Positives = 86/118 (72%)
 Frame = +3

Query: 39  GELGRRKRGS*LKVACLAQEVGTV*NKVANGCVTRGNLPNSSGQILKKAKKRCXXXXXXX 218
           G     K    +KVACLAQEVGTV NKVANGCV RGNLPNSSGQILKKAKK         
Sbjct: 106 GSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNLPNSSGQILKKAKK--------- 156

Query: 219 XXXXXXXXTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNIA*VKKG 392
                   TKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNI  +  G
Sbjct: 157 -------LTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNICAIMTG 207



 Score = 71.6 bits (174), Expect(2) = 5e-51
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +2

Query: 422 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 523
           CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR
Sbjct: 202 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 235



 Score =  105 bits (263), Expect = 1e-20
 Identities = 54/71 (76%), Positives = 55/71 (77%)
 Frame = +3

Query: 663 GTPKAKAALWVPTDAGVRKHGERTGLDTLVVHAVNDECSPLVYADQGPS*RVKHSAWGVR 842
           GTPKAKAALWVPTDAGVRKH ERTGLDTLVVHAVNDECSPLVY DQGP            
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGP------------ 287

Query: 843 SQDRNSKELTG 875
             +RNSKELTG
Sbjct: 288 --NRNSKELTG 296


>gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33]
           gi|145690754|gb|ABP91259.1| unknown protein
           [Streptococcus suis 98HAH33] gi|145690985|gb|ABP91490.1|
           unknown protein [Streptococcus suis 98HAH33]
           gi|145691080|gb|ABP91585.1| unknown protein
           [Streptococcus suis 98HAH33]
          Length = 186

 Score = 75.5 bits (184), Expect(4) = 2e-22
 Identities = 40/69 (57%), Positives = 45/69 (65%)
 Frame = -3

Query: 786 PRANTHRLRHGLPGYLILFAPHAFAPQRR*GPRELPSLLAFLRRSLDLTPTHEIPLSSVS 607
           P  +THRLR GLPGYLILFAPHAF PQR+   RE  S   FL  S   T TH IPLS  +
Sbjct: 23  PTPSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPLSPPVFLHISTHFTATHGIPLSPSA 82

Query: 606 LKLIGFESI 580
           LK   F+S+
Sbjct: 83  LKFDSFQSV 91



 Score = 38.1 bits (87), Expect(4) = 2e-22
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -1

Query: 389 LLHSRDIAGSGFRPLSKIPHCCPP 318
           LLHSR +A SG  PL KIP+CC P
Sbjct: 163 LLHSRGVARSGLPPLPKIPYCCLP 186



 Score = 32.0 bits (71), Expect(4) = 2e-22
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -2

Query: 562 LSLSTRFTAYVPFTXXXXXXXXXXXSYRGCWHGVSRGFFL 443
           L L T  TA   FT            YRGCWH VSR F +
Sbjct: 98  LLLQTYQTACARFTPNKSGQRSGPTYYRGCWHVVSRPFLV 137



 Score = 26.2 bits (56), Expect(4) = 2e-22
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 848 LRPYSPGGVFHALAGPL 798
           +R YSPGGV +ALA  L
Sbjct: 1   MRSYSPGGVLNALAAAL 17


>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
           gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
           jensenii 269-3]
          Length = 174

 Score = 88.6 bits (218), Expect(2) = 9e-19
 Identities = 55/121 (45%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
 Frame = -2

Query: 565 RLSLSTRFTAYVPFTXXXXXXXXXXXSYRGCWHGVSRGFFLESCHDRAL-------DERA 407
           RLS  T  +A   FT            YRGCWH VSR F ++    +A            
Sbjct: 54  RLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTE 113

Query: 406 LQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYLT 227
           L     FFTHA LL + F HC RFPTAA R S GRVSVP+W I    +L II LVS YLT
Sbjct: 114 LYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLT 173

Query: 226 N 224
           N
Sbjct: 174 N 174



 Score = 31.6 bits (70), Expect(2) = 9e-19
 Identities = 18/33 (54%), Positives = 20/33 (60%)
 Frame = -1

Query: 722 MLSHPSVGRDPESCLRFWRSFVDLWI*PLHTKF 624
           MLS  SV   PES LR W S + L I PLH +F
Sbjct: 1   MLSSLSVSYRPESRLRHWCSSIYLRIPPLHMEF 33


>emb|CBA31938.1| hypothetical protein Csp_D29620 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 57

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = -2

Query: 379 HAILLDRAFAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYLTNYLI 215
           HA LLD+A AHCP+FPTAA R S GRVSVPVWL++  DQL I+GLVSLYLTNYLI
Sbjct: 3   HAALLDQACAHCPKFPTAASRRSLGRVSVPVWLVVLSDQLQIVGLVSLYLTNYLI 57