BLASTX nr result

ID: Coptis24_contig00011000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011000
         (1445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17444.3| unnamed protein product [Vitis vinifera]              599   e-169
ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266...   599   e-169
ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|2...   583   e-164
ref|NP_001240252.1| uncharacterized protein LOC100780403 precurs...   533   e-149
gb|AAM20633.1| putative protein [Arabidopsis thaliana] gi|221364...   528   e-147

>emb|CBI17444.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  599 bits (1545), Expect = e-169
 Identities = 277/390 (71%), Positives = 326/390 (83%)
 Frame = -1

Query: 1337 ILQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDVESRSQT 1158
            ILQ   A+S V P SNCYA DNSSHI+DF+SW+G PFE DGKDSD+V+RFCKDVESRSQT
Sbjct: 204  ILQAPGASSIVAPSSNCYALDNSSHIFDFSSWLGQPFEYDGKDSDLVVRFCKDVESRSQT 263

Query: 1157 GYVDFGRFDTFHHFVTGTGHVSFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGSCLNGAC 978
            GYVDFGRFD F++FV G+GH++FVQ FYNGDL+NCE + DK+GRTAQVNIICGSC NG C
Sbjct: 264  GYVDFGRFDKFNYFVAGSGHINFVQEFYNGDLLNCETTHDKMGRTAQVNIICGSCSNGQC 323

Query: 977  KGQLGCICNVAYDSTCRVFVELAVPCEKSGPRIFKGFTVGFHPRSWEVVYNGLTQLGYEA 798
             G+LGCICNV Y+STCRV VELA+PC++ G R+F+GFTVGFHPRSWE+VYNG+TQLG++ 
Sbjct: 324  AGELGCICNVTYESTCRVLVELAIPCKEQGVRVFEGFTVGFHPRSWEIVYNGMTQLGFDK 383

Query: 797  LRHEFSFGTEQTRVSLYMTAISSLSTLVGKPMLKVSPDKGLEVKLSGTGESGSPPTTLSP 618
              H FSFGTE T V+LYMTAI+SLSTLV KP +K+ P+ GL+V LSG+G +G PPTTLSP
Sbjct: 384  SHHAFSFGTEHTYVALYMTAIASLSTLVQKPTVKIFPEHGLKVGLSGSGATGRPPTTLSP 443

Query: 617  TMLNVDWTCQKASDTPYEVAISIPVEGYEPVEFTLSKMCAYKQGRKDDATRGWATFGIFS 438
            TML VDW C+KA DTPYEV I+IPVEGYEP++FTL+KMC Y QG+    TRGWA FG+ S
Sbjct: 444  TMLVVDWRCEKARDTPYEVDITIPVEGYEPIQFTLTKMCEYPQGKGGGTTRGWAIFGVAS 503

Query: 437  CIFFVISTLLCCGGFIYKTRVEHQHGLDALPGMTILSACLEAVTXXXXXXXGYSRVEDVN 258
            CIF ++STL CCGGF+YKTRVE Q GLDALPGMTILSACLEAV+        YSR ED N
Sbjct: 504  CIFIILSTLFCCGGFVYKTRVERQRGLDALPGMTILSACLEAVS----GGSHYSRAEDTN 559

Query: 257  NTSINQASWERQPVSAQGSQRTSDRKYGSI 168
            +  INQASWERQP +AQG+ +TS+RKYGSI
Sbjct: 560  SAFINQASWERQPDAAQGTWKTSERKYGSI 589


>ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266005 [Vitis vinifera]
          Length = 410

 Score =  599 bits (1545), Expect = e-169
 Identities = 277/390 (71%), Positives = 326/390 (83%)
 Frame = -1

Query: 1337 ILQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDVESRSQT 1158
            ILQ   A+S V P SNCYA DNSSHI+DF+SW+G PFE DGKDSD+V+RFCKDVESRSQT
Sbjct: 25   ILQAPGASSIVAPSSNCYALDNSSHIFDFSSWLGQPFEYDGKDSDLVVRFCKDVESRSQT 84

Query: 1157 GYVDFGRFDTFHHFVTGTGHVSFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGSCLNGAC 978
            GYVDFGRFD F++FV G+GH++FVQ FYNGDL+NCE + DK+GRTAQVNIICGSC NG C
Sbjct: 85   GYVDFGRFDKFNYFVAGSGHINFVQEFYNGDLLNCETTHDKMGRTAQVNIICGSCSNGQC 144

Query: 977  KGQLGCICNVAYDSTCRVFVELAVPCEKSGPRIFKGFTVGFHPRSWEVVYNGLTQLGYEA 798
             G+LGCICNV Y+STCRV VELA+PC++ G R+F+GFTVGFHPRSWE+VYNG+TQLG++ 
Sbjct: 145  AGELGCICNVTYESTCRVLVELAIPCKEQGVRVFEGFTVGFHPRSWEIVYNGMTQLGFDK 204

Query: 797  LRHEFSFGTEQTRVSLYMTAISSLSTLVGKPMLKVSPDKGLEVKLSGTGESGSPPTTLSP 618
              H FSFGTE T V+LYMTAI+SLSTLV KP +K+ P+ GL+V LSG+G +G PPTTLSP
Sbjct: 205  SHHAFSFGTEHTYVALYMTAIASLSTLVQKPTVKIFPEHGLKVGLSGSGATGRPPTTLSP 264

Query: 617  TMLNVDWTCQKASDTPYEVAISIPVEGYEPVEFTLSKMCAYKQGRKDDATRGWATFGIFS 438
            TML VDW C+KA DTPYEV I+IPVEGYEP++FTL+KMC Y QG+    TRGWA FG+ S
Sbjct: 265  TMLVVDWRCEKARDTPYEVDITIPVEGYEPIQFTLTKMCEYPQGKGGGTTRGWAIFGVAS 324

Query: 437  CIFFVISTLLCCGGFIYKTRVEHQHGLDALPGMTILSACLEAVTXXXXXXXGYSRVEDVN 258
            CIF ++STL CCGGF+YKTRVE Q GLDALPGMTILSACLEAV+        YSR ED N
Sbjct: 325  CIFIILSTLFCCGGFVYKTRVERQRGLDALPGMTILSACLEAVS----GGSHYSRAEDTN 380

Query: 257  NTSINQASWERQPVSAQGSQRTSDRKYGSI 168
            +  INQASWERQP +AQG+ +TS+RKYGSI
Sbjct: 381  SAFINQASWERQPDAAQGTWKTSERKYGSI 410


>ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|222853175|gb|EEE90722.1|
            predicted protein [Populus trichocarpa]
          Length = 395

 Score =  583 bits (1503), Expect = e-164
 Identities = 268/382 (70%), Positives = 323/382 (84%)
 Frame = -1

Query: 1313 SFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDVESRSQTGYVDFGRF 1134
            S  VP SNCYA DNSS I DF+SWIGH FE +GK++D+VIRFCKDVE+RSQTGYVDFGRF
Sbjct: 17   SVAVPSSNCYALDNSSRIVDFSSWIGHFFEYEGKETDVVIRFCKDVEARSQTGYVDFGRF 76

Query: 1133 DTFHHFVTGTGHVSFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGSCLNGACKGQLGCIC 954
            + F+HFV G+G V FVQG+YNGDL+NCEQS+DKLGRTAQVNIICGSCLNG CKG+LGCIC
Sbjct: 77   NNFNHFVAGSGRVDFVQGYYNGDLLNCEQSYDKLGRTAQVNIICGSCLNGQCKGELGCIC 136

Query: 953  NVAYDSTCRVFVELAVPCEKSGPRIFKGFTVGFHPRSWEVVYNGLTQLGYEALRHEFSFG 774
            NV  +S+CR+FVELA+PCEK GPR+F+GFTVGFHPRSWE+VYNGLTQLGYE   H+FSF 
Sbjct: 137  NVTQESSCRIFVELAIPCEKPGPRVFEGFTVGFHPRSWEIVYNGLTQLGYEKSHHDFSFT 196

Query: 773  TEQTRVSLYMTAISSLSTLVGKPMLKVSPDKGLEVKLSGTGESGSPPTTLSPTMLNVDWT 594
            TEQT+V+LYMTAI+SLSTLV KPM+K+ P+KGLEV+LSG+G +GSPPTTL+PT+LNV+WT
Sbjct: 197  TEQTQVTLYMTAIASLSTLVRKPMIKILPEKGLEVRLSGSGATGSPPTTLTPTLLNVEWT 256

Query: 593  CQKASDTPYEVAISIPVEGYEPVEFTLSKMCAYKQGRKDDATRGWATFGIFSCIFFVIST 414
            CQ+A DTPYEV ++IP+EGYEP++F L+K C ++Q +++D+TRGWA FGI SCIF V ST
Sbjct: 257  CQEARDTPYEVNVTIPIEGYEPIQFFLAKSCEHRQDQREDSTRGWAIFGIISCIFIVAST 316

Query: 413  LLCCGGFIYKTRVEHQHGLDALPGMTILSACLEAVTXXXXXXXGYSRVEDVNNTSINQAS 234
            L C GGFIYKTRVE  HG+DALPGMT LSACLE  +       GYSR E+  +   ++AS
Sbjct: 317  LFCVGGFIYKTRVERLHGIDALPGMTYLSACLETAS---GVGYGYSRPEENGSGYASEAS 373

Query: 233  WERQPVSAQGSQRTSDRKYGSI 168
            WER   SAQG+++ S R YGSI
Sbjct: 374  WERPSASAQGTKKQSTRNYGSI 395


>ref|NP_001240252.1| uncharacterized protein LOC100780403 precursor [Glycine max]
            gi|255647389|gb|ACU24160.1| unknown [Glycine max]
          Length = 405

 Score =  533 bits (1373), Expect = e-149
 Identities = 258/393 (65%), Positives = 305/393 (77%), Gaps = 4/393 (1%)
 Frame = -1

Query: 1334 LQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKD-SDIVIRFCKDVESRSQT 1158
            LQV    S  +P SNCYAFDNSS I DF+ W G+ FE D K  SD+ +RFCKDVESRSQT
Sbjct: 16   LQVPWVASVSMPTSNCYAFDNSSRIVDFSGWTGYLFEYDQKQGSDLSVRFCKDVESRSQT 75

Query: 1157 GYVDFGRFDTFHHFVTGTGHVSFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGSCLNGAC 978
            GYVDFGRFD F++FV G+G   FVQ FYNGDLM CEQS+DK+GRTAQVNIICG CLNG C
Sbjct: 76   GYVDFGRFDRFNYFVAGSGQSDFVQEFYNGDLMGCEQSYDKMGRTAQVNIICGKCLNGQC 135

Query: 977  KGQLGCICNVAYDSTCRVFVELAVPCEKSGPRIFKGFTVGFHPRSWEVVYNGLTQLGYEA 798
            KG+ GCICNV  +S CRV V+LA+PC+K GP +F+GFTVGFHPRSWE+VYNG+TQ+G+E 
Sbjct: 136  KGRPGCICNVTNESNCRVLVDLAIPCDKPGPPVFQGFTVGFHPRSWELVYNGMTQIGFEK 195

Query: 797  LRHEFSFGTEQTRVSLYMTAISSLSTLVGKPMLKVSPDKGLEVKLSGTGESGSPPTTLSP 618
              H+FSF T QT+V L+MTA++SLS+LV KP LKV PDKGLEV LSG+   G PPTTLSP
Sbjct: 196  PHHDFSFHTGQTQVVLFMTAVASLSSLVHKPSLKVLPDKGLEVGLSGSAAKGKPPTTLSP 255

Query: 617  TMLNVDWTCQKASDTPYEVAISIPVEGYEPVEFTLSKMCAYKQGRKDDATRGWATFGIFS 438
            +ML VDW C+ A +TPYEV I+IPVEGYEP+EF L+K C YKQ      TRGWA FG+ S
Sbjct: 256  SMLIVDWRCEVARNTPYEVNITIPVEGYEPIEFVLTKTCDYKQDPGGGRTRGWAIFGVLS 315

Query: 437  CIFFVISTLLCCGGFIYKTRVEHQHGLDALPGMTILSACLEAVTXXXXXXXGYSRVEDVN 258
            CIFFV STL CCGGFIYKT+VE Q G+DALPGMTILSACLE V+       GYSR ED+N
Sbjct: 316  CIFFVSSTLFCCGGFIYKTKVERQRGIDALPGMTILSACLETVS---GAGQGYSRPEDIN 372

Query: 257  NTSINQASWERQPVSAQG---SQRTSDRKYGSI 168
            +   ++ SWER P  +QG   + R ++RKYG+I
Sbjct: 373  SAFGSETSWERPPGPSQGAGAAWRPTERKYGAI 405


>gb|AAM20633.1| putative protein [Arabidopsis thaliana] gi|22136408|gb|AAM91282.1|
            putative protein [Arabidopsis thaliana]
          Length = 406

 Score =  528 bits (1360), Expect = e-147
 Identities = 245/399 (61%), Positives = 307/399 (76%), Gaps = 3/399 (0%)
 Frame = -1

Query: 1355 VLFTYGILQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDV 1176
            +LF +    V  A S  VP SNCYA DNSS + DF+SWIGHPFE DGK+ D+V+RFCKDV
Sbjct: 11   ILFLFISAFVIGAASVPVPDSNCYALDNSSRLVDFSSWIGHPFEYDGKEFDLVVRFCKDV 70

Query: 1175 ESRSQTGYVDFGRFDTFHHFVTGTGHVSFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGS 996
            E+R Q GYVDFGRFD   +FV+ + +  FVQGFY+GDL NCEQS+DKLGRTAQVNIICG+
Sbjct: 71   ETRGQAGYVDFGRFDPLSYFVSSSENFDFVQGFYHGDLSNCEQSYDKLGRTAQVNIICGN 130

Query: 995  CLNGACKGQLGCICNVAYDSTCRVFVELAVPCEKSGPRIFKGFTVGFHPRSWEVVYNGLT 816
            C +G CKG LGCIC+V  DSTCRV V+LA+PCEK GPR+FKGFTVG HPRSWE++YNG+T
Sbjct: 131  CSDGRCKGGLGCICSVTQDSTCRVTVDLAIPCEKPGPRVFKGFTVGLHPRSWEIIYNGMT 190

Query: 815  QLGYEALRHEFSFGTEQTRVSLYMTAISSLSTLVGKPMLKVSPDKGLEVKLSGTGESGSP 636
            Q G++  R EFSF TEQT ++LYMTAI+SLSTLVGKP++KVSP+ GL+VK++G+  +G+ 
Sbjct: 191  QFGFDKPRREFSFKTEQTHLTLYMTAIASLSTLVGKPIIKVSPENGLDVKIAGSSLTGNH 250

Query: 635  PTTLSPTMLNVDWTCQKASDTPYEVAISIPVEGYEPVEFTLSKMCAYKQGRKDDATRGWA 456
            PTTLSP+ L +DW C+K+  TPYEV ++IPV+GY+PV+F L+K+C Y QG +  + +GWA
Sbjct: 251  PTTLSPSTLVLDWNCEKSRRTPYEVNVTIPVDGYDPVQFFLTKLCEYNQGNEGGSAKGWA 310

Query: 455  TFGIFSCIFFVISTLLCCGGFIYKTRVEHQHGLDALPGMTILSACLEAVTXXXXXXXGYS 276
             FG+FSC+F V S L CCGGFIYKTRVE   G DALPGM++LS  LE V+        YS
Sbjct: 311  IFGVFSCVFLVASALFCCGGFIYKTRVERVRGTDALPGMSLLSGLLETVS---GSGQSYS 367

Query: 275  RVEDVNNTSINQASWERQPVS---AQGSQRTSDRKYGSI 168
            R ED+NN   N+ SW+R   S   A  +QR S+R YG+I
Sbjct: 368  RTEDINNAFANEVSWDRSSASSTQATTTQRPSERTYGAI 406


Top