BLASTX nr result

ID: Coptis24_contig00010990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010990
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v...   357   3e-96
emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]   357   3e-96
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]           349   5e-94
ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...   349   6e-94
gb|ACU56981.1| importin alpha [Citrus sinensis]                       343   2e-92

>ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296089795|emb|CBI39614.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score =  357 bits (915), Expect = 3e-96
 Identities = 175/225 (77%), Positives = 193/225 (85%)
 Frame = +2

Query: 26  HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
           H S TVL+PALRT+GNIVTGDDAQTQFVIDNQVLPCLYQLLTQ +KKSIKKEACWTISNI
Sbjct: 299 HPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNI 358

Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
           TAGNKGQIQA I+ANIILPLV LLQHAEFDIKKEAAW +SNATSGGS EQIQ+L +QGCI
Sbjct: 359 TAGNKGQIQAVIEANIILPLVNLLQHAEFDIKKEAAWGISNATSGGSHEQIQFLVSQGCI 418

Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
           KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C GLDKI+ L
Sbjct: 419 KPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDECDGLDKIELL 478

Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNFES 700
           Q+HDNNEIYEK+VK             QN QDG DG  QGF F S
Sbjct: 479 QTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 522


>emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]
          Length = 523

 Score =  357 bits (915), Expect = 3e-96
 Identities = 175/225 (77%), Positives = 193/225 (85%)
 Frame = +2

Query: 26  HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
           H S TVL+PALRT+GNIVTGDDAQTQFVIDNQVLPCLYQLLTQ +KKSIKKEACWTISNI
Sbjct: 287 HPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNI 346

Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
           TAGNKGQIQA I+ANIILPLV LLQHAEFDIKKEAAW +SNATSGGS EQIQ+L +QGCI
Sbjct: 347 TAGNKGQIQAVIEANIILPLVNLLQHAEFDIKKEAAWGISNATSGGSHEQIQFLVSQGCI 406

Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
           KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C GLDKI+ L
Sbjct: 407 KPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDECDGLDKIELL 466

Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNFES 700
           Q+HDNNEIYEK+VK             QN QDG DG  QGF F S
Sbjct: 467 QTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 510


>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score =  349 bits (896), Expect = 5e-94
 Identities = 171/223 (76%), Positives = 191/223 (85%)
 Frame = +2

Query: 26  HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
           H S TVL+PALRT GNIVTGDDAQTQ+VIDN+VLPCLYQLLTQ +KKSIKKEACWTISNI
Sbjct: 299 HPSPTVLIPALRTAGNIVTGDDAQTQYVIDNRVLPCLYQLLTQNHKKSIKKEACWTISNI 358

Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
           TAGN+ QIQA I+ANIILPLV LLQ+AEFDIKKEAAWA+SNATSGGS EQI++LA+QGCI
Sbjct: 359 TAGNRAQIQAVIEANIILPLVHLLQNAEFDIKKEAAWAISNATSGGSNEQIRFLASQGCI 418

Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
           KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G +GG+N +AQM+D+C GLDKI+NL
Sbjct: 419 KPLCDLLICPDPRIVTVCLEGLENILKVGEMDKETGANGGINLYAQMIDECEGLDKIENL 478

Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNF 694
           Q+HDNNEIYEK VK             QN  DGVDG  QGF F
Sbjct: 479 QTHDNNEIYEKTVK-ILEKYWAEEDEEQNLPDGVDGNQQGFQF 520


>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  349 bits (895), Expect = 6e-94
 Identities = 172/223 (77%), Positives = 188/223 (84%)
 Frame = +2

Query: 26  HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
           H S TVL+PALRT+GNIVTGDD QTQFVIDNQVLPCL+QLL Q +KKSIKKEACWTISNI
Sbjct: 300 HPSPTVLIPALRTVGNIVTGDDGQTQFVIDNQVLPCLHQLLLQNHKKSIKKEACWTISNI 359

Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
           TAGN+ QIQA I+ANIILPLV LLQHAEFDIKKEAAWA+SNATS GS EQIQ+L +QGCI
Sbjct: 360 TAGNRTQIQAVIEANIILPLVNLLQHAEFDIKKEAAWAISNATSAGSHEQIQFLVSQGCI 419

Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
           KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKEMG +GGVN +AQMVD+C GLDKI+NL
Sbjct: 420 KPLCDLLICPDPRIVTVCLEGLENILKVGEADKEMGLNGGVNLYAQMVDECDGLDKIENL 479

Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNF 694
           Q+HDNNEIYEKAVK                QDG DG  QGF F
Sbjct: 480 QTHDNNEIYEKAVKILERYWAEEEDGEPIVQDGGDGNQQGFAF 522


>gb|ACU56981.1| importin alpha [Citrus sinensis]
          Length = 535

 Score =  343 bits (881), Expect = 2e-92
 Identities = 168/227 (74%), Positives = 191/227 (84%), Gaps = 1/227 (0%)
 Frame = +2

Query: 26  HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
           H S+TVL+PALRT+GNIVTGDDAQTQFVIDN VLPCLYQLLT  +KKSIKKEACWTISNI
Sbjct: 297 HPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTHNHKKSIKKEACWTISNI 356

Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
           TAGN+ QIQA I+ANIILPLV LLQHAEF+IKKEAAWA+SNATSGGS +QIQ+L +QGCI
Sbjct: 357 TAGNRAQIQAVIEANIILPLVHLLQHAEFEIKKEAAWAISNATSGGSHQQIQFLVSQGCI 416

Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
           KP+CDLLVCPDPRIVTVCLEGLENILKVGE DKEMG + G+N +AQM+D+C GLDKI+NL
Sbjct: 417 KPLCDLLVCPDPRIVTVCLEGLENILKVGEADKEMGMNNGINVYAQMIDECDGLDKIENL 476

Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQD-GVDGTPQGFNFESD 703
           Q+HDNNEIYEKAVK             Q  Q+ G+    QGF F ++
Sbjct: 477 QTHDNNEIYEKAVKILERYWAEEEEEEQLIQEGGIGNQQQGFGFATN 523


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