BLASTX nr result
ID: Coptis24_contig00010990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010990
(921 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v... 357 3e-96
emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera] 357 3e-96
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum] 349 5e-94
ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2... 349 6e-94
gb|ACU56981.1| importin alpha [Citrus sinensis] 343 2e-92
>ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
gi|296089795|emb|CBI39614.3| unnamed protein product
[Vitis vinifera]
Length = 535
Score = 357 bits (915), Expect = 3e-96
Identities = 175/225 (77%), Positives = 193/225 (85%)
Frame = +2
Query: 26 HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
H S TVL+PALRT+GNIVTGDDAQTQFVIDNQVLPCLYQLLTQ +KKSIKKEACWTISNI
Sbjct: 299 HPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNI 358
Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
TAGNKGQIQA I+ANIILPLV LLQHAEFDIKKEAAW +SNATSGGS EQIQ+L +QGCI
Sbjct: 359 TAGNKGQIQAVIEANIILPLVNLLQHAEFDIKKEAAWGISNATSGGSHEQIQFLVSQGCI 418
Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C GLDKI+ L
Sbjct: 419 KPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDECDGLDKIELL 478
Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNFES 700
Q+HDNNEIYEK+VK QN QDG DG QGF F S
Sbjct: 479 QTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 522
>emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]
Length = 523
Score = 357 bits (915), Expect = 3e-96
Identities = 175/225 (77%), Positives = 193/225 (85%)
Frame = +2
Query: 26 HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
H S TVL+PALRT+GNIVTGDDAQTQFVIDNQVLPCLYQLLTQ +KKSIKKEACWTISNI
Sbjct: 287 HPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNI 346
Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
TAGNKGQIQA I+ANIILPLV LLQHAEFDIKKEAAW +SNATSGGS EQIQ+L +QGCI
Sbjct: 347 TAGNKGQIQAVIEANIILPLVNLLQHAEFDIKKEAAWGISNATSGGSHEQIQFLVSQGCI 406
Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C GLDKI+ L
Sbjct: 407 KPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDECDGLDKIELL 466
Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNFES 700
Q+HDNNEIYEK+VK QN QDG DG QGF F S
Sbjct: 467 QTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 510
>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
Length = 535
Score = 349 bits (896), Expect = 5e-94
Identities = 171/223 (76%), Positives = 191/223 (85%)
Frame = +2
Query: 26 HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
H S TVL+PALRT GNIVTGDDAQTQ+VIDN+VLPCLYQLLTQ +KKSIKKEACWTISNI
Sbjct: 299 HPSPTVLIPALRTAGNIVTGDDAQTQYVIDNRVLPCLYQLLTQNHKKSIKKEACWTISNI 358
Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
TAGN+ QIQA I+ANIILPLV LLQ+AEFDIKKEAAWA+SNATSGGS EQI++LA+QGCI
Sbjct: 359 TAGNRAQIQAVIEANIILPLVHLLQNAEFDIKKEAAWAISNATSGGSNEQIRFLASQGCI 418
Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G +GG+N +AQM+D+C GLDKI+NL
Sbjct: 419 KPLCDLLICPDPRIVTVCLEGLENILKVGEMDKETGANGGINLYAQMIDECEGLDKIENL 478
Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNF 694
Q+HDNNEIYEK VK QN DGVDG QGF F
Sbjct: 479 QTHDNNEIYEKTVK-ILEKYWAEEDEEQNLPDGVDGNQQGFQF 520
>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
predicted protein [Populus trichocarpa]
Length = 537
Score = 349 bits (895), Expect = 6e-94
Identities = 172/223 (77%), Positives = 188/223 (84%)
Frame = +2
Query: 26 HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
H S TVL+PALRT+GNIVTGDD QTQFVIDNQVLPCL+QLL Q +KKSIKKEACWTISNI
Sbjct: 300 HPSPTVLIPALRTVGNIVTGDDGQTQFVIDNQVLPCLHQLLLQNHKKSIKKEACWTISNI 359
Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
TAGN+ QIQA I+ANIILPLV LLQHAEFDIKKEAAWA+SNATS GS EQIQ+L +QGCI
Sbjct: 360 TAGNRTQIQAVIEANIILPLVNLLQHAEFDIKKEAAWAISNATSAGSHEQIQFLVSQGCI 419
Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
KP+CDLL+CPDPRIVTVCLEGLENILKVGE DKEMG +GGVN +AQMVD+C GLDKI+NL
Sbjct: 420 KPLCDLLICPDPRIVTVCLEGLENILKVGEADKEMGLNGGVNLYAQMVDECDGLDKIENL 479
Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNF 694
Q+HDNNEIYEKAVK QDG DG QGF F
Sbjct: 480 QTHDNNEIYEKAVKILERYWAEEEDGEPIVQDGGDGNQQGFAF 522
>gb|ACU56981.1| importin alpha [Citrus sinensis]
Length = 535
Score = 343 bits (881), Expect = 2e-92
Identities = 168/227 (74%), Positives = 191/227 (84%), Gaps = 1/227 (0%)
Frame = +2
Query: 26 HQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKKEACWTISNI 205
H S+TVL+PALRT+GNIVTGDDAQTQFVIDN VLPCLYQLLT +KKSIKKEACWTISNI
Sbjct: 297 HPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTHNHKKSIKKEACWTISNI 356
Query: 206 TAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQIQYLANQGCI 385
TAGN+ QIQA I+ANIILPLV LLQHAEF+IKKEAAWA+SNATSGGS +QIQ+L +QGCI
Sbjct: 357 TAGNRAQIQAVIEANIILPLVHLLQHAEFEIKKEAAWAISNATSGGSHQQIQFLVSQGCI 416
Query: 386 KPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCGGLDKIKNL 565
KP+CDLLVCPDPRIVTVCLEGLENILKVGE DKEMG + G+N +AQM+D+C GLDKI+NL
Sbjct: 417 KPLCDLLVCPDPRIVTVCLEGLENILKVGEADKEMGMNNGINVYAQMIDECDGLDKIENL 476
Query: 566 QSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQD-GVDGTPQGFNFESD 703
Q+HDNNEIYEKAVK Q Q+ G+ QGF F ++
Sbjct: 477 QTHDNNEIYEKAVKILERYWAEEEEEEQLIQEGGIGNQQQGFGFATN 523