BLASTX nr result

ID: Coptis24_contig00010989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010989
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281459.1| PREDICTED: uncharacterized protein LOC100257...   286   3e-75
emb|CBI20724.3| unnamed protein product [Vitis vinifera]              280   2e-73
ref|XP_002516139.1| conserved hypothetical protein [Ricinus comm...   280   2e-73
dbj|BAK61875.1| ferredoxin-like protein [Citrus unshiu]               274   2e-71
ref|NP_001235274.1| uncharacterized protein LOC100305941 precurs...   271   1e-70

>ref|XP_002281459.1| PREDICTED: uncharacterized protein LOC100257849 [Vitis vinifera]
          Length = 228

 Score =  286 bits (733), Expect = 3e-75
 Identities = 144/218 (66%), Positives = 173/218 (79%), Gaps = 6/218 (2%)
 Frame = -2

Query: 795 VMQLATWILLTSVFLVSVSANSK----NNPADELVSVLNSNRTSHKSSTLPDNAGLACIA 628
           ++ L+  + L+ VFL SVSA++     +NPADELV+ LN+NRT+HK S L DN GLACIA
Sbjct: 7   ILSLSLSLSLSLVFL-SVSADTHKSVTDNPADELVATLNNNRTAHKESALYDNPGLACIA 65

Query: 627 LQYIKAYQGKCDDVGGSNAKKPADAEFAENFAPNCGVQVSTLAPISGRLLACQSRYVGAK 448
           LQYIKAYQG C +VGG +AKKPA+++FAE FAPNCGVQVSTL  I+GRLL C+++YV   
Sbjct: 66  LQYIKAYQGSCGEVGGEDAKKPAESQFAETFAPNCGVQVSTLTQITGRLLGCETKYVSPA 125

Query: 447 EVFSNILIQNQKSLDILYSKNHTEIGAAVSGSDGGAPYFWCILFSSGNSTSSFVLDGGVA 268
           E FS IL++N KSL+ILYSKNHTE+GAAVSGSDGGAPYFWC+LFS+G S SSFVLDGGVA
Sbjct: 126 EAFSEILMKNSKSLEILYSKNHTELGAAVSGSDGGAPYFWCVLFSNGKSNSSFVLDGGVA 185

Query: 267 KTQHPGCFSGANDDCSGADEFRS--HLWLYIAIVYIAL 160
           K   PGCFSGAND CS AD++     LW Y A + IAL
Sbjct: 186 KISKPGCFSGANDQCSSADDWSQTRRLWPYAAGLLIAL 223


>emb|CBI20724.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  280 bits (717), Expect = 2e-73
 Identities = 137/201 (68%), Positives = 165/201 (82%), Gaps = 4/201 (1%)
 Frame = -2

Query: 795 VMQLATWILLTSVFLVSVSANSK----NNPADELVSVLNSNRTSHKSSTLPDNAGLACIA 628
           ++ L+  + L+ VFL SVSA++     +NPADELV+ LN+NRT+HK S L DN GLACIA
Sbjct: 7   ILSLSLSLSLSLVFL-SVSADTHKSVTDNPADELVATLNNNRTAHKESALYDNPGLACIA 65

Query: 627 LQYIKAYQGKCDDVGGSNAKKPADAEFAENFAPNCGVQVSTLAPISGRLLACQSRYVGAK 448
           LQYIKAYQG C +VGG +AKKPA+++FAE FAPNCGVQVSTL  I+GRLL C+++YV   
Sbjct: 66  LQYIKAYQGSCGEVGGEDAKKPAESQFAETFAPNCGVQVSTLTQITGRLLGCETKYVSPA 125

Query: 447 EVFSNILIQNQKSLDILYSKNHTEIGAAVSGSDGGAPYFWCILFSSGNSTSSFVLDGGVA 268
           E FS IL++N KSL+ILYSKNHTE+GAAVSGSDGGAPYFWC+LFS+G S SSFVLDGGVA
Sbjct: 126 EAFSEILMKNSKSLEILYSKNHTELGAAVSGSDGGAPYFWCVLFSNGKSNSSFVLDGGVA 185

Query: 267 KTQHPGCFSGANDDCSGADEF 205
           K   PGCFSGAND CS AD++
Sbjct: 186 KISKPGCFSGANDQCSSADDW 206


>ref|XP_002516139.1| conserved hypothetical protein [Ricinus communis]
           gi|223544625|gb|EEF46141.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  280 bits (717), Expect = 2e-73
 Identities = 140/221 (63%), Positives = 171/221 (77%), Gaps = 7/221 (3%)
 Frame = -2

Query: 786 LATWILLTSVFLVSVSANSK----NNPADELVSVLNSNRTSHKSSTLPDNAGLACIALQY 619
           +AT  LL S+   SVSAN++    +NPADELV+VLNSNRT+HK S+L DN GLACIALQY
Sbjct: 1   MATMFLLLSLLFFSVSANTQIKVTDNPADELVTVLNSNRTAHKESSLYDNPGLACIALQY 60

Query: 618 IKAYQGKCDDVGGSNAKKPADAEFAENFAPNCGVQVSTLAPISGRLLACQSRYVGAKEVF 439
           IKAYQG C  VGG++AKKPA++EF E FAP CGV VSTL PI+GRLL C+S+YV   E F
Sbjct: 61  IKAYQGDCGAVGGTDAKKPAESEFTETFAPACGVTVSTLTPITGRLLGCESKYVNPAEAF 120

Query: 438 SNILIQNQKSLDILYSKNHTEIGAAVSGSDGGAPYFWCILFSSGNSTSSFVLDGGVAKTQ 259
           S IL++N KSL+ILY KNHTE+GAAV+G+DGG+PYFWC+LFS+G   SSF L+ GVAK  
Sbjct: 121 SEILMKNSKSLEILYDKNHTEVGAAVTGTDGGSPYFWCVLFSNGKRNSSFALEEGVAKVT 180

Query: 258 HPGCFSGANDDCSGADEFRS--HLWLYI-AIVYIALAVFGL 145
            PGCFSGAND+CSGA ++     LW Y+ A ++    VFGL
Sbjct: 181 RPGCFSGANDECSGASDWSRPLGLWPYVTAGLFAVTYVFGL 221


>dbj|BAK61875.1| ferredoxin-like protein [Citrus unshiu]
          Length = 219

 Score =  274 bits (701), Expect = 2e-71
 Identities = 136/197 (69%), Positives = 157/197 (79%), Gaps = 3/197 (1%)
 Frame = -2

Query: 726 NNPADELVSVLNSNRTSHKSSTLPDNAGLACIALQYIKAYQGKCDDVGGSNAKKPADAEF 547
           NNPADELV+VLNSNRT+HK S+L DN GLACIALQYIKAY+G CDDVGG  AK+PA +EF
Sbjct: 23  NNPADELVAVLNSNRTAHKESSLHDNPGLACIALQYIKAYEGHCDDVGGPKAKRPAASEF 82

Query: 546 AENFAPNCGVQVSTLAPISGRLLACQSRYVGAKEVFSNILIQNQKSLDILYSKNHTEIGA 367
           A+ FAPNCGV  S+L  I+GRLL CQSRYV A E FS+IL++N+KSLDILYSKNHTE+GA
Sbjct: 83  ADTFAPNCGVLSSSLTQITGRLLGCQSRYVHASEAFSDILMKNEKSLDILYSKNHTEVGA 142

Query: 366 AVSGSDGGAPYFWCILFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSGADEFRS--HL 193
           AVSG+DGGAPYFWC+LFS+G   SSFV + GVAK   PGCFSGAND+CS A        L
Sbjct: 143 AVSGTDGGAPYFWCVLFSNGKHNSSFVFEDGVAKISKPGCFSGANDECSAAVGLSQPHGL 202

Query: 192 WLYIAIVYIALA-VFGL 145
           W Y  I  IA++  FGL
Sbjct: 203 WPYAIISLIAVSYAFGL 219


>ref|NP_001235274.1| uncharacterized protein LOC100305941 precursor [Glycine max]
           gi|255627049|gb|ACU13869.1| unknown [Glycine max]
          Length = 217

 Score =  271 bits (693), Expect = 1e-70
 Identities = 129/200 (64%), Positives = 163/200 (81%), Gaps = 6/200 (3%)
 Frame = -2

Query: 786 LATWILLTSV-FLVSVS-ANSK----NNPADELVSVLNSNRTSHKSSTLPDNAGLACIAL 625
           +  W LL S+ F+ +V+ AN++    NNPAD+LV+ +N NRT+HK S L DN GLACIAL
Sbjct: 5   MTMWFLLVSLSFIYAVATANTQIKITNNPADKLVAAINENRTAHKVSALTDNPGLACIAL 64

Query: 624 QYIKAYQGKCDDVGGSNAKKPADAEFAENFAPNCGVQVSTLAPISGRLLACQSRYVGAKE 445
           QYIKAYQG+CD VGGS+ KKP ++ FAE FAPNCGV+ STLAPI+GR LACQ++YV A E
Sbjct: 65  QYIKAYQGECDAVGGSDGKKPPESHFAEVFAPNCGVEASTLAPITGRFLACQTKYVHAPE 124

Query: 444 VFSNILIQNQKSLDILYSKNHTEIGAAVSGSDGGAPYFWCILFSSGNSTSSFVLDGGVAK 265
            FS+ILI+NQKS+DILYSKNHT++GAAV+G+DGG+PYFWC+LFSSG   ++F  + GVAK
Sbjct: 125 AFSDILIRNQKSIDILYSKNHTQVGAAVTGTDGGSPYFWCVLFSSGKPNNTFTFESGVAK 184

Query: 264 TQHPGCFSGANDDCSGADEF 205
              PGCFSGAND+CSGA ++
Sbjct: 185 ITKPGCFSGANDECSGASDW 204


Top