BLASTX nr result

ID: Coptis24_contig00010988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010988
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320560.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-15
ref|XP_003624243.1| hypothetical protein MTR_7g080880 [Medicago ...    72   9e-15
gb|ABN08993.1| hypothetical protein MtrDRAFT_AC171534g19v1 [Medi...    72   9e-15
ref|NP_199650.3| ZIP4-like protein [Arabidopsis thaliana] gi|167...    70   3e-14
gb|ABO71664.1| ZIP4/SPO22 [Arabidopsis thaliana]                       70   3e-14

>ref|XP_002320560.1| predicted protein [Populus trichocarpa] gi|222861333|gb|EEE98875.1|
           predicted protein [Populus trichocarpa]
          Length = 956

 Score = 73.9 bits (180), Expect(2) = 3e-15
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = -2

Query: 167 GAISQLQSMTSCHDFTSDFLILSAHESIASKALTVAIASLSNLLSLYSPGKPMPT 3
           GAI+Q+Q+M +C DFT DFL LSAHE++A  AL VAI+SLSNLLS Y+ G+ MPT
Sbjct: 547 GAINQVQAMKTCFDFTPDFLSLSAHEAVACHALPVAISSLSNLLSFYTLGRSMPT 601



 Score = 32.3 bits (72), Expect(2) = 3e-15
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = -1

Query: 234 EQLHPNIACAFL--KIYLQKKD 175
           E+L PNIACAFL  KIYLQ  D
Sbjct: 523 EKLEPNIACAFLKFKIYLQNND 544


>ref|XP_003624243.1| hypothetical protein MTR_7g080880 [Medicago truncatula]
           gi|355499258|gb|AES80461.1| hypothetical protein
           MTR_7g080880 [Medicago truncatula]
          Length = 510

 Score = 72.0 bits (175), Expect(2) = 9e-15
 Identities = 33/61 (54%), Positives = 47/61 (77%)
 Frame = -2

Query: 185 RKKTKKGAISQLQSMTSCHDFTSDFLILSAHESIASKALTVAIASLSNLLSLYSPGKPMP 6
           +K   +GAI+Q+++MT+C DF  DFL LSAHE++A  A +VA+ASLS +L+ Y+ GK MP
Sbjct: 103 QKNDSQGAITQIEAMTACLDFQPDFLSLSAHEAVACSARSVAVASLSTMLNFYTSGKSMP 162

Query: 5   T 3
           T
Sbjct: 163 T 163



 Score = 32.7 bits (73), Expect(2) = 9e-15
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = -1

Query: 234 EQLHPNIACAFL--KIYLQKKDEK 169
           E+L PN+ CAFL  KIYLQK D +
Sbjct: 85  EKLEPNVVCAFLKYKIYLQKNDSQ 108


>gb|ABN08993.1| hypothetical protein MtrDRAFT_AC171534g19v1 [Medicago truncatula]
          Length = 510

 Score = 72.0 bits (175), Expect(2) = 9e-15
 Identities = 33/61 (54%), Positives = 47/61 (77%)
 Frame = -2

Query: 185 RKKTKKGAISQLQSMTSCHDFTSDFLILSAHESIASKALTVAIASLSNLLSLYSPGKPMP 6
           +K   +GAI+Q+++MT+C DF  DFL LSAHE++A  A +VA+ASLS +L+ Y+ GK MP
Sbjct: 103 QKNDSQGAITQIEAMTACLDFQPDFLSLSAHEAVACSARSVAVASLSTMLNFYTSGKSMP 162

Query: 5   T 3
           T
Sbjct: 163 T 163



 Score = 32.7 bits (73), Expect(2) = 9e-15
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = -1

Query: 234 EQLHPNIACAFL--KIYLQKKDEK 169
           E+L PN+ CAFL  KIYLQK D +
Sbjct: 85  EKLEPNVVCAFLKYKIYLQKNDSQ 108


>ref|NP_199650.3| ZIP4-like protein [Arabidopsis thaliana]
           gi|167735842|dbj|BAG07186.1| ZIP4-like protein
           [Arabidopsis thaliana] gi|332008281|gb|AED95664.1|
           ZIP4-like protein [Arabidopsis thaliana]
          Length = 936

 Score = 69.7 bits (169), Expect(2) = 3e-14
 Identities = 35/61 (57%), Positives = 44/61 (72%)
 Frame = -2

Query: 185 RKKTKKGAISQLQSMTSCHDFTSDFLILSAHESIASKALTVAIASLSNLLSLYSPGKPMP 6
           +KK    AI Q+ +MTSC DF+ D+L LSAHE+I+ +AL VA+ASLS  LS Y  GK MP
Sbjct: 529 QKKEHSCAIGQIDAMTSCLDFSPDYLSLSAHEAISCQALPVAVASLSKFLSFYISGKKMP 588

Query: 5   T 3
           T
Sbjct: 589 T 589



 Score = 33.5 bits (75), Expect(2) = 3e-14
 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -1

Query: 234 EQLHPNIACAFL--KIYLQKKD 175
           E+L PNIAC+FL  KIYLQKK+
Sbjct: 511 EKLEPNIACSFLKFKIYLQKKE 532


>gb|ABO71664.1| ZIP4/SPO22 [Arabidopsis thaliana]
          Length = 936

 Score = 69.7 bits (169), Expect(2) = 3e-14
 Identities = 35/61 (57%), Positives = 44/61 (72%)
 Frame = -2

Query: 185 RKKTKKGAISQLQSMTSCHDFTSDFLILSAHESIASKALTVAIASLSNLLSLYSPGKPMP 6
           +KK    AI Q+ +MTSC DF+ D+L LSAHE+I+ +AL VA+ASLS  LS Y  GK MP
Sbjct: 529 QKKEHSCAIGQIDAMTSCLDFSPDYLSLSAHEAISCQALPVAVASLSKFLSFYISGKKMP 588

Query: 5   T 3
           T
Sbjct: 589 T 589



 Score = 33.5 bits (75), Expect(2) = 3e-14
 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -1

Query: 234 EQLHPNIACAFL--KIYLQKKD 175
           E+L PNIAC+FL  KIYLQKK+
Sbjct: 511 EKLEPNIACSFLKFKIYLQKKE 532


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