BLASTX nr result
ID: Coptis24_contig00010984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010984
(2195 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD... 561 e-157
emb|CBI17339.3| unnamed protein product [Vitis vinifera] 561 e-157
ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|2... 531 e-148
ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicag... 520 e-145
ref|XP_004134850.1| PREDICTED: cell cycle checkpoint protein RAD... 516 e-144
>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
Length = 1013
Score = 561 bits (1445), Expect = e-157
Identities = 299/523 (57%), Positives = 374/523 (71%), Gaps = 11/523 (2%)
Frame = +3
Query: 114 LWVDKYRPHSLLDLAVQNNKVQQLKTWLKQRLLTPKEKLHGHVLLITGQAGVGKSATVHV 293
LWVDKY+P SL +LAV KV+++ W ++RL T +E++ ++L+ITGQAGVGKSAT+H
Sbjct: 90 LWVDKYKPRSLEELAVHKKKVEEVTVWFEKRLRTSREEMC-NLLVITGQAGVGKSATIHA 148
Query: 294 IASHLGARLFEWNTPTPTLWQEHVYNLRSGLYYMSKLDEFESFVERIRKYPLLPLFSIGG 473
IASHLGARL EWNTP PT+WQEH++N SG+ Y SKLDEFESFVER+RKY L+P G
Sbjct: 149 IASHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFESFVERMRKYGLIPPSFAGE 208
Query: 474 SVEPSXXXXXXXXXXNXXXXXXXXXXCLHTLVGSTQIPTVILITEYAKSDSSNS--ATRD 647
S N CL L STQIPT ILIT+Y K+DS+++ R
Sbjct: 209 SKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARC 268
Query: 648 LEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICREEQCNLEAEQIDQIARVSGGDIRNA 827
LE++Q SLENAGACK+AFNP+T NSIKKTLSKICR+EQC + A+QID IAR SGGD+R+A
Sbjct: 269 LEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGVTADQIDLIARSSGGDVRHA 328
Query: 828 ITSLQYFCLTPGQLLSSNTNHP-----KDKAAELRMPNDGGALSFGREETLSLFHALGKF 992
ITSLQYFCL P +LS + + P K+K+ EL +DG +L FGR+ETLSLFHALGKF
Sbjct: 329 ITSLQYFCLKPDPMLSLSFSEPARTYSKEKSDELNPLDDGFSLPFGRDETLSLFHALGKF 388
Query: 993 LHNKRESVNTVASGQNQYLLREKFARLPLKMDAPEKIICQANGEARLITDFLHENVLDFL 1172
LHNKRES N +A GQ +L+RE+ RLPLKMDAPE+++CQA+ +AR + DFLHENVLDFL
Sbjct: 389 LHNKRESENAIAPGQEAFLVRERLTRLPLKMDAPERVLCQAHVQARPVVDFLHENVLDFL 448
Query: 1173 SDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTNNYELESIRQSAAASVAVRGVLFGNS 1352
S+EA+D+A VASYL D+D LLA +G + +YE ++ QSAAASVA RGVLFGNS
Sbjct: 449 SEEAIDDASAVASYLSDSDFLLAAHRG----MLATSYEAGNVLQSAAASVAARGVLFGNS 504
Query: 1353 HPAPSRWHAIRSPKIWQVEQSSRHNKNEIVRQRYEACNSVSYDLCVMATEYKPLLRWLKG 1532
HP SRWHAIR PK+WQVEQSS HNK EI+ QR A + + ++ V+ATEY P+ +WL+
Sbjct: 505 HPLASRWHAIRRPKLWQVEQSSLHNKCEILGQRLVALS--TSNVSVIATEYIPIFKWLRY 562
Query: 1533 GALKHPQTNQERMQDCQIDEDMLDCDRLDSSEN----DEIEDW 1649
GA + Q +Q + + D D LD EN DEIEDW
Sbjct: 563 GASGGFEDYQALIQGNETELDDNDSMILDEKENEISDDEIEDW 605
>emb|CBI17339.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 561 bits (1445), Expect = e-157
Identities = 299/523 (57%), Positives = 374/523 (71%), Gaps = 11/523 (2%)
Frame = +3
Query: 114 LWVDKYRPHSLLDLAVQNNKVQQLKTWLKQRLLTPKEKLHGHVLLITGQAGVGKSATVHV 293
LWVDKY+P SL +LAV KV+++ W ++RL T +E++ ++L+ITGQAGVGKSAT+H
Sbjct: 90 LWVDKYKPRSLEELAVHKKKVEEVTVWFEKRLRTSREEMC-NLLVITGQAGVGKSATIHA 148
Query: 294 IASHLGARLFEWNTPTPTLWQEHVYNLRSGLYYMSKLDEFESFVERIRKYPLLPLFSIGG 473
IASHLGARL EWNTP PT+WQEH++N SG+ Y SKLDEFESFVER+RKY L+P G
Sbjct: 149 IASHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFESFVERMRKYGLIPPSFAGE 208
Query: 474 SVEPSXXXXXXXXXXNXXXXXXXXXXCLHTLVGSTQIPTVILITEYAKSDSSNS--ATRD 647
S N CL L STQIPT ILIT+Y K+DS+++ R
Sbjct: 209 SKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARC 268
Query: 648 LEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICREEQCNLEAEQIDQIARVSGGDIRNA 827
LE++Q SLENAGACK+AFNP+T NSIKKTLSKICR+EQC + A+QID IAR SGGD+R+A
Sbjct: 269 LEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGVTADQIDLIARSSGGDVRHA 328
Query: 828 ITSLQYFCLTPGQLLSSNTNHP-----KDKAAELRMPNDGGALSFGREETLSLFHALGKF 992
ITSLQYFCL P +LS + + P K+K+ EL +DG +L FGR+ETLSLFHALGKF
Sbjct: 329 ITSLQYFCLKPDPMLSLSFSEPARTYSKEKSDELNPLDDGFSLPFGRDETLSLFHALGKF 388
Query: 993 LHNKRESVNTVASGQNQYLLREKFARLPLKMDAPEKIICQANGEARLITDFLHENVLDFL 1172
LHNKRES N +A GQ +L+RE+ RLPLKMDAPE+++CQA+ +AR + DFLHENVLDFL
Sbjct: 389 LHNKRESENAIAPGQEAFLVRERLTRLPLKMDAPERVLCQAHVQARPVVDFLHENVLDFL 448
Query: 1173 SDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTNNYELESIRQSAAASVAVRGVLFGNS 1352
S+EA+D+A VASYL D+D LLA +G + +YE ++ QSAAASVA RGVLFGNS
Sbjct: 449 SEEAIDDASAVASYLSDSDFLLAAHRG----MLATSYEAGNVLQSAAASVAARGVLFGNS 504
Query: 1353 HPAPSRWHAIRSPKIWQVEQSSRHNKNEIVRQRYEACNSVSYDLCVMATEYKPLLRWLKG 1532
HP SRWHAIR PK+WQVEQSS HNK EI+ QR A + + ++ V+ATEY P+ +WL+
Sbjct: 505 HPLASRWHAIRRPKLWQVEQSSLHNKCEILGQRLVALS--TSNVSVIATEYIPIFKWLRY 562
Query: 1533 GALKHPQTNQERMQDCQIDEDMLDCDRLDSSEN----DEIEDW 1649
GA + Q +Q + + D D LD EN DEIEDW
Sbjct: 563 GASGGFEDYQALIQGNETELDDNDSMILDEKENEISDDEIEDW 605
>ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|222836733|gb|EEE75126.1|
predicted protein [Populus trichocarpa]
Length = 613
Score = 531 bits (1368), Expect = e-148
Identities = 292/555 (52%), Positives = 385/555 (69%), Gaps = 11/555 (1%)
Frame = +3
Query: 18 EEDFDALCDDFTKQQPLFAPPGLNNNKTRRELLWVDKYRPHSLLDLAVQNNKVQQLKTWL 197
EEDF+ L + A G +N K LWVDK++P SL +LAV KV+++K+W
Sbjct: 74 EEDFEELFSG----SKVSAGSGRSNVKE----LWVDKHKPQSLEELAVHKKKVEEVKSWF 125
Query: 198 KQRLLTPKEKLHGHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLR 377
++RL T K L +V++I G+AGVGKS T+ VIASH GARL EWNTPTPT+WQEHV+N
Sbjct: 126 EERLKTTKGNLINNVVVINGKAGVGKSTTIQVIASHFGARLCEWNTPTPTIWQEHVHNTN 185
Query: 378 SGLYYMSKLDEFESFVERIRKYPLLPLFSIGGSVEPS-XXXXXXXXXXNXXXXXXXXXXC 554
+G+ Y SKLDEF +F+E+IRKY L+P S V+PS N C
Sbjct: 186 TGIQYTSKLDEFVNFIEKIRKYGLIP-SSSSEDVKPSIILLIDDLPMTNGRVAFERLQSC 244
Query: 555 LHTLVGSTQIPTVILITEYAKSDSSNSATRDLEDIQSSLENAGACKMAFNPLTVNSIKKT 734
L LV STQ+PT IL+++Y ++DS++ R LE +Q SLENAGACK++FNP+T NSIKKT
Sbjct: 245 LLHLVRSTQLPTAILVSDYDEADSADHTARRLEQLQLSLENAGACKVSFNPITNNSIKKT 304
Query: 735 LSKICREEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNHPK---DKA 905
LS+ICR+EQC++ EQ+D IA+ SGGDIR+AITSLQ FC+ P +L+ + + P K
Sbjct: 305 LSRICRQEQCSVTDEQLDLIAKGSGGDIRHAITSLQLFCVKPDLVLNGSYSTPSYLYGKE 364
Query: 906 AELRMPNDGGALSFGREETLSLFHALGKFLHNKRES--VNTVASGQNQYLLREKFARLPL 1079
++ G +L FGR+ETLSLFHALGKFLHNKRE+ N + G + +L++E F+RLPL
Sbjct: 365 DDIDALVSGISLLFGRDETLSLFHALGKFLHNKRETEVANAITPG-DAFLVQENFSRLPL 423
Query: 1080 KMDAPEKIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGST 1259
KMDAPEK++CQA+G+AR +TDFLHENVLDF+SDEA+D+AW V+SY D+D LL++F+G
Sbjct: 424 KMDAPEKVLCQAHGQARPVTDFLHENVLDFISDEAMDDAWHVSSYFSDSDLLLSSFRG-- 481
Query: 1260 WSRMTNNYELESIRQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNEI 1439
+ E E++ QSAAASVAVRGVLFGNSHP+P RWHAIR PK+WQVE+S HN+ EI
Sbjct: 482 --MLARYNEAENVLQSAAASVAVRGVLFGNSHPSPPRWHAIRKPKLWQVEKSMLHNQKEI 539
Query: 1440 VRQRYEACN-SVSYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDEDMLDCDRL 1616
VRQR+ A N S S ++ +ATEY PLL+WL+ A + NQ + + D + D L
Sbjct: 540 VRQRFIAYNGSSSCNVSDVATEYMPLLKWLEHRASGF-EDNQALVYCKKTDGESCDRMSL 598
Query: 1617 DSSE----NDEIEDW 1649
D E +DEIE+W
Sbjct: 599 DDKESDISDDEIEEW 613
>ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
gi|355523294|gb|AET03748.1| Cell cycle checkpoint protein
RAD17 [Medicago truncatula]
Length = 604
Score = 520 bits (1338), Expect = e-145
Identities = 278/546 (50%), Positives = 371/546 (67%), Gaps = 10/546 (1%)
Frame = +3
Query: 42 DDFTKQ---QPLFAPPGLNNNKTRRELLWVDKYRPHSLLDLAVQNNKVQQLKTWLKQRLL 212
DDF + +FA G ++ E LWVDKY+PHSL +LAV KV+++KTW ++RL
Sbjct: 68 DDFNQVFTGSKVFAAAG--TQRSTAEELWVDKYKPHSLEELAVHKKKVEEVKTWFEERLK 125
Query: 213 TPKEKLHGHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRSGLYY 392
K +VL+++GQAG+GKSA +HVIASHLGA + WNTPTP +WQEH+YN + Y
Sbjct: 126 PSKGVYRNNVLVVSGQAGIGKSAAIHVIASHLGAMVCGWNTPTPVIWQEHLYNSGTETKY 185
Query: 393 MSKLDEFESFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXXNXXXXXXXXXXCLHTLVG 572
SKLDEF SFVERIR + L+P G S + CL+ LV
Sbjct: 186 TSKLDEFVSFVERIRTFGLIPTSFTGESKPSIIYLIDDLPMMHSKAALGRLKDCLNLLVH 245
Query: 573 STQIPTVILITEYAKSDSSNSATRDLEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICR 752
+T+IPT IL+T+Y +DS++ R +E++++SLE++GACK+AFNP+TVNSIKK L +IC+
Sbjct: 246 TTRIPTAILVTDYGNTDSADYNARSVEELKTSLESSGACKIAFNPITVNSIKKILFRICQ 305
Query: 753 EEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQL--LSSNTNHPKDKAAELRMP- 923
EQC++ A+ +D IA+ SGGDIR+AITSLQ+FCL P Q+ LS +T P E P
Sbjct: 306 MEQCDVTADNVDLIAKASGGDIRHAITSLQFFCLNPNQVHSLSQSTRSPHALKEESNKPV 365
Query: 924 --NDGGALSFGREETLSLFHALGKFLHNKRESVNTVASGQNQYLLREKFARLPLKMDAPE 1097
+DG +L FGR+ETLSLFHALGKFLHNKRE+ V QN +L+ E+F+RLPLKMD PE
Sbjct: 366 ELDDGSSLYFGRDETLSLFHALGKFLHNKRETGVAVEYDQNGFLIHERFSRLPLKMDVPE 425
Query: 1098 KIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTN 1277
KI+CQ++ + + DFLHENVLDFL+DEAV++AW ++SYL DAD LL +G M +
Sbjct: 426 KILCQSHVQPGPVADFLHENVLDFLNDEAVEDAWILSSYLGDADILLTKLRG-----MVS 480
Query: 1278 NY-ELESIRQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNEIVRQRY 1454
+Y E ESI QSAAAS+AVRGVLFGNS P SRWHAIR PK+WQVE+ + KN+++RQR
Sbjct: 481 SYNEAESILQSAAASIAVRGVLFGNSCPLSSRWHAIRRPKLWQVEKELSYQKNKMLRQRI 540
Query: 1455 EACNSV-SYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDEDMLDCDRLDSSEN 1631
ACN + SY + VMATEY P+ + L G + + + ID+ LD + ++ S+
Sbjct: 541 PACNQLSSYHMSVMATEYMPMFK-LLGNRVGSGYDELHQESNIDIDKMSLDGEAMEISD- 598
Query: 1632 DEIEDW 1649
D+IEDW
Sbjct: 599 DDIEDW 604
>ref|XP_004134850.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Cucumis sativus]
gi|449491306|ref|XP_004158856.1| PREDICTED: cell cycle
checkpoint protein RAD17-like [Cucumis sativus]
Length = 605
Score = 516 bits (1330), Expect = e-144
Identities = 278/549 (50%), Positives = 372/549 (67%), Gaps = 6/549 (1%)
Frame = +3
Query: 21 EDFDALCDDFTKQQPLFAPPGLNNNKTRRELLWVDKYRPHSLLDLAVQNNKVQQLKTWLK 200
++F++ C+DF + F + + R EL W+DKYRPHSL +LAVQ KV ++K W +
Sbjct: 66 DEFNSFCEDFDQVFSTFKVSAGSGSVCRNEL-WIDKYRPHSLEELAVQKKKVDEVKVWFE 124
Query: 201 QRLLTPKEKLHGHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRS 380
RL TP + +V+LITG AGVGKSATVHVIASHLGARL EW+TPTP +W+EH++NL +
Sbjct: 125 DRLRTPMDANGSNVILITGPAGVGKSATVHVIASHLGARLCEWDTPTPVIWREHLHNLTA 184
Query: 381 GLYYMSKLDEFESFVERIRKYPLLP-LFSIGGSVEPSXXXXXXXXXXNXXXXXXXXXXCL 557
G+ Y SKLDEFESF+ R+RKY ++P FSI S +P N CL
Sbjct: 185 GIQYTSKLDEFESFIGRMRKYGVIPSCFSI-DSKQPVILLIDDLPLTNGKAALRRLQSCL 243
Query: 558 HTLVGSTQIPTVILITEYAKSDSSNSATRDLEDIQSSLENAGACKMAFNPLTVNSIKKTL 737
H V STQ+PT I+IT+ AK+++++ + LE+IQ LENAGACK+AFNP+T NSIKKT+
Sbjct: 244 HLYVQSTQVPTAIVITDCAKAETTDFTVQYLEEIQLCLENAGACKVAFNPITNNSIKKTI 303
Query: 738 SKICREEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNHP---KDKAA 908
S+IC EQ +L EQID IA+ SGGD+R+AI SLQ FCL P Q+ SS+++ KD+
Sbjct: 304 SRICSCEQYDLAVEQIDAIAKSSGGDVRHAIMSLQLFCLKPSQICSSSSSAQESLKDEEM 363
Query: 909 ELRMPNDGGALSFGREETLSLFHALGKFLHNKRESVNTVASGQNQYLLREKFARLPLKMD 1088
+ +D + FGR+ETLSLFHALGKFLHNKR SVN + +++ ++E R PL MD
Sbjct: 364 PHTLVDDRFSFQFGRDETLSLFHALGKFLHNKRHSVNELVL-DSEFSVQESLLRRPLNMD 422
Query: 1089 APEKIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSR 1268
PEK++CQA+G+AR I DFLHENVLDF+++EA+D+AW VASYL DAD LL+++ G
Sbjct: 423 PPEKVLCQAHGQARPIADFLHENVLDFMNEEAIDDAWVVASYLGDADTLLSSYDG----M 478
Query: 1269 MTNNYELESIRQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNEIVRQ 1448
+ + + E+I AAASVAVRGVLFGNSHP SRWHAIR PK+WQ+E SS NK ++V+Q
Sbjct: 479 LARHNDAENILHLAAASVAVRGVLFGNSHPLSSRWHAIRRPKLWQIEGSSLSNK-KMVKQ 537
Query: 1449 RYEACNSVSY-DLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDEDM-LDCDRLDS 1622
R+ +S V+ATEY P L+WL G ++ + + DM + D+
Sbjct: 538 RFVPYGGISLAHFSVVATEYVPALKWL-GNSVSEDHEKLWALTEENTGFDMVISGDQESH 596
Query: 1623 SENDEIEDW 1649
+ +EIEDW
Sbjct: 597 TSEEEIEDW 605