BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010983
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604926.1| 2-oxoisovalerate dehydrogenase subunit beta ...   553   e-172
ref|XP_002304849.1| predicted protein [Populus trichocarpa] gi|2...   551   e-172
gb|AFK44061.1| unknown [Medicago truncatula]                          551   e-172
ref|XP_002523400.1| 2-oxoisovalerate dehydrogenase, putative [Ri...   539   e-168
ref|XP_002285753.1| PREDICTED: 2-oxoisovalerate dehydrogenase su...   536   e-168

>ref|XP_003604926.1| 2-oxoisovalerate dehydrogenase subunit beta [Medicago truncatula]
            gi|355505981|gb|AES87123.1| 2-oxoisovalerate
            dehydrogenase subunit beta [Medicago truncatula]
          Length = 358

 Score =  553 bits (1425), Expect(2) = e-172
 Identities = 262/319 (82%), Positives = 298/319 (93%), Gaps = 1/319 (0%)
 Frame = -2

Query: 1352 MANTLKRLGKWASSISKTRYYSTICEEQKVQQSG-KTVNLFTAINQALHIALETDPRAYL 1176
            M+  +KRLGKW S +S+    ++I ++    ++G K++NL++A+NQALHIAL+TDPRAY+
Sbjct: 1    MSPCVKRLGKWVSLVSRRGLSTSIVQKDAAAENGVKSLNLYSAVNQALHIALDTDPRAYV 60

Query: 1175 FGEDVGFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYI 996
            FGEDVGFGGVFRCTTGLADRFGK RVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYI
Sbjct: 61   FGEDVGFGGVFRCTTGLADRFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYI 120

Query: 995  FPAFDQIVSEAAKFRYRSGNQFNCGGLTIRSPYGAVGHGGHYHSQSPEAFFCHVPGLKVV 816
            FPAFDQIV+EAAKFRYRSGNQFNCGGLTIR+PYGAVGHGGHYHSQSPEAFFCHVPG+KVV
Sbjct: 121  FPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFCHVPGIKVV 180

Query: 815  IPRSPQQAKGLLLACIRDPNPTIFFEPKWLYRLAVEDVPEHDYMLPLSKAEVIRLGSDIT 636
            IPRSP++AKGLLL+CIRDPNP +FFEPKWLYRLAVE+VPE DYMLPLS+AEVIR GSDIT
Sbjct: 181  IPRSPKEAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEGDYMLPLSEAEVIREGSDIT 240

Query: 635  LVGWGAQLALMEQACIDAEKDGISCELIDLKTLIPWDKETVEASVRKTGKLLVSHEAPIT 456
            LVGWGAQL++MEQAC+DAEK+GISCELIDLKTLIPWDKETVEASV+KTG+LL+SHEAP+T
Sbjct: 241  LVGWGAQLSIMEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLLISHEAPVT 300

Query: 455  GGFGAEIAASISESCFLRV 399
            GGFGAEI+ASI E CF R+
Sbjct: 301  GGFGAEISASILERCFSRL 319



 Score = 80.9 bits (198), Expect(2) = e-172
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -1

Query: 348 LEAPIARICGLDTPFPLVFEPFYMPTKNKIFDAIKATVNY 229
           LEAP+AR+CGLDTPFPLVFEPFYMPTKNKI DAIK+TV+Y
Sbjct: 319 LEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVSY 358


>ref|XP_002304849.1| predicted protein [Populus trichocarpa] gi|222842281|gb|EEE79828.1|
            predicted protein [Populus trichocarpa]
          Length = 368

 Score =  551 bits (1419), Expect(2) = e-172
 Identities = 266/329 (80%), Positives = 299/329 (90%), Gaps = 9/329 (2%)
 Frame = -2

Query: 1358 IIMANTLKRLGK-WASSISKTRYYSTICEEQKV--------QQSGKTVNLFTAINQALHI 1206
            ++MA +L+R G+   SS+   R +ST C+  KV        Q++GK++NL +AINQALHI
Sbjct: 1    MVMATSLRRCGRRLVSSVFNNREFSTTCQGNKVIQQQHEQLQETGKSLNLCSAINQALHI 60

Query: 1205 ALETDPRAYLFGEDVGFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRA 1026
            ALETDPR+Y+FGEDV FGGVFRCTTGLA++FGK RVFNTPLCEQGIVGFGIGLAAM NRA
Sbjct: 61   ALETDPRSYVFGEDVSFGGVFRCTTGLAEKFGKKRVFNTPLCEQGIVGFGIGLAAMDNRA 120

Query: 1025 IAEIQFADYIFPAFDQIVSEAAKFRYRSGNQFNCGGLTIRSPYGAVGHGGHYHSQSPEAF 846
            IAEIQFADYIFPAFDQIV+EAAKFRYRSGNQFNCGGLTIR+PYGAVGHGGHYHSQSPEAF
Sbjct: 121  IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAF 180

Query: 845  FCHVPGLKVVIPRSPQQAKGLLLACIRDPNPTIFFEPKWLYRLAVEDVPEHDYMLPLSKA 666
            FCHVPG+KVV+PRSP++AKGLLL+CIRD NP IFFEPKWLYRLAVE+VPEHDYMLPLS+A
Sbjct: 181  FCHVPGIKVVVPRSPREAKGLLLSCIRDTNPVIFFEPKWLYRLAVEEVPEHDYMLPLSEA 240

Query: 665  EVIRLGSDITLVGWGAQLALMEQACIDAEKDGISCELIDLKTLIPWDKETVEASVRKTGK 486
            EVIR GSDITLVGWGAQL++MEQAC DAEK+GISCELIDLKTLIPWDKETVEASVRKTGK
Sbjct: 241  EVIREGSDITLVGWGAQLSIMEQACFDAEKEGISCELIDLKTLIPWDKETVEASVRKTGK 300

Query: 485  LLVSHEAPITGGFGAEIAASISESCFLRV 399
            LL+SHEAP+TGGFGAEI+ASI E CFLR+
Sbjct: 301  LLISHEAPVTGGFGAEISASIVERCFLRL 329



 Score = 82.4 bits (202), Expect(2) = e-172
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = -1

Query: 348 LEAPIARICGLDTPFPLVFEPFYMPTKNKIFDAIKATVNY 229
           LEAP+ARICGLDTPFPLVFEPFY+PTKNKI DAIKATVNY
Sbjct: 329 LEAPVARICGLDTPFPLVFEPFYVPTKNKIVDAIKATVNY 368


>gb|AFK44061.1| unknown [Medicago truncatula]
          Length = 358

 Score =  551 bits (1419), Expect(2) = e-172
 Identities = 261/319 (81%), Positives = 297/319 (93%), Gaps = 1/319 (0%)
 Frame = -2

Query: 1352 MANTLKRLGKWASSISKTRYYSTICEEQKVQQSG-KTVNLFTAINQALHIALETDPRAYL 1176
            M+  +KRLGKW S +S+    ++I ++    ++G K++NL++A+NQALHIAL+TDPRAY+
Sbjct: 1    MSPCVKRLGKWVSLVSRRGLSTSIVQKDAAAENGVKSLNLYSAVNQALHIALDTDPRAYV 60

Query: 1175 FGEDVGFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYI 996
            FGEDVGFGGVFRCTTGLADRFGK RVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYI
Sbjct: 61   FGEDVGFGGVFRCTTGLADRFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYI 120

Query: 995  FPAFDQIVSEAAKFRYRSGNQFNCGGLTIRSPYGAVGHGGHYHSQSPEAFFCHVPGLKVV 816
            FPAFDQIV+EAAKFRYRSGNQFNCGGLTIR+PYGAVGHGGHYHSQSPEAFFCHVPG+KVV
Sbjct: 121  FPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFCHVPGIKVV 180

Query: 815  IPRSPQQAKGLLLACIRDPNPTIFFEPKWLYRLAVEDVPEHDYMLPLSKAEVIRLGSDIT 636
            IPRSP++AKGLLL+CIRDPNP +FFEPKWLYRLAVE+VPE DYMLPLS+AEVIR GSDIT
Sbjct: 181  IPRSPKEAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEGDYMLPLSEAEVIREGSDIT 240

Query: 635  LVGWGAQLALMEQACIDAEKDGISCELIDLKTLIPWDKETVEASVRKTGKLLVSHEAPIT 456
            LVGWGAQL++MEQAC+DAEK+GISCELIDLK LIPWDKETVEASV+KTG+LL+SHEAP+T
Sbjct: 241  LVGWGAQLSIMEQACVDAEKEGISCELIDLKILIPWDKETVEASVKKTGRLLISHEAPVT 300

Query: 455  GGFGAEIAASISESCFLRV 399
            GGFGAEI+ASI E CF R+
Sbjct: 301  GGFGAEISASILERCFSRL 319



 Score = 80.9 bits (198), Expect(2) = e-172
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -1

Query: 348 LEAPIARICGLDTPFPLVFEPFYMPTKNKIFDAIKATVNY 229
           LEAP+AR+CGLDTPFPLVFEPFYMPTKNKI DAIK+TV+Y
Sbjct: 319 LEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVSY 358


>ref|XP_002523400.1| 2-oxoisovalerate dehydrogenase, putative [Ricinus communis]
            gi|223537350|gb|EEF38979.1| 2-oxoisovalerate
            dehydrogenase, putative [Ricinus communis]
          Length = 365

 Score =  539 bits (1389), Expect(2) = e-168
 Identities = 265/326 (81%), Positives = 296/326 (90%), Gaps = 8/326 (2%)
 Frame = -2

Query: 1352 MANTLKRLGK-WASSISKTRYYST-------ICEEQKVQQSGKTVNLFTAINQALHIALE 1197
            MA   +R G   ASSIS+ R  S        I ++Q++Q++ K++NL +AINQALHIAL+
Sbjct: 1    MATHFRRSGGILASSISQKRQLSAAACQGNLIHQQQRLQETSKSLNLCSAINQALHIALD 60

Query: 1196 TDPRAYLFGEDVGFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIAE 1017
            +DPR+Y+FGEDV FGGVFRCTTGLA+RFGKNRVFNTPLCEQGIVGFGIGLAAM NRAIAE
Sbjct: 61   SDPRSYVFGEDVSFGGVFRCTTGLAERFGKNRVFNTPLCEQGIVGFGIGLAAMDNRAIAE 120

Query: 1016 IQFADYIFPAFDQIVSEAAKFRYRSGNQFNCGGLTIRSPYGAVGHGGHYHSQSPEAFFCH 837
            IQFADYI+PAFDQIV+EAAKFRYRSGNQ+NCGGLTIR+PYGAVGHGGHYHSQSPEAFFCH
Sbjct: 121  IQFADYIYPAFDQIVNEAAKFRYRSGNQYNCGGLTIRAPYGAVGHGGHYHSQSPEAFFCH 180

Query: 836  VPGLKVVIPRSPQQAKGLLLACIRDPNPTIFFEPKWLYRLAVEDVPEHDYMLPLSKAEVI 657
            VPG+KVVIPRSP QAKGLLL+ IRDPNP IFFEPKWLYRLAVE+VPEHDYMLPLS+AEVI
Sbjct: 181  VPGIKVVIPRSPWQAKGLLLSAIRDPNPVIFFEPKWLYRLAVEEVPEHDYMLPLSEAEVI 240

Query: 656  RLGSDITLVGWGAQLALMEQACIDAEKDGISCELIDLKTLIPWDKETVEASVRKTGKLLV 477
            + GSDITLVGWGAQL++MEQAC DAEKDGISCELIDLKTLIPWDKETVEASVRKTG+LL+
Sbjct: 241  QEGSDITLVGWGAQLSVMEQACTDAEKDGISCELIDLKTLIPWDKETVEASVRKTGRLLI 300

Query: 476  SHEAPITGGFGAEIAASISESCFLRV 399
            SHEAPITGGFGAEI+ASI E CFLR+
Sbjct: 301  SHEAPITGGFGAEISASIVERCFLRL 326



 Score = 80.9 bits (198), Expect(2) = e-168
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -1

Query: 348 LEAPIARICGLDTPFPLVFEPFYMPTKNKIFDAIKATVNY 229
           LEAP+AR+CGLDTPFPLVFEPFYMP KNKI DAIK+TVNY
Sbjct: 326 LEAPVARVCGLDTPFPLVFEPFYMPNKNKILDAIKSTVNY 365


>ref|XP_002285753.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
            [Vitis vinifera] gi|297746506|emb|CBI16562.3| unnamed
            protein product [Vitis vinifera]
          Length = 358

 Score =  536 bits (1382), Expect(2) = e-168
 Identities = 264/317 (83%), Positives = 293/317 (92%), Gaps = 2/317 (0%)
 Frame = -2

Query: 1343 TLKR-LGKWASSISKTRYYSTICEEQKVQQSG-KTVNLFTAINQALHIALETDPRAYLFG 1170
            T++R  G  A SISK R +ST      V  +G K++NLF+AIN AL IALE+DPRAY+FG
Sbjct: 6    TMRRSFGSLAFSISK-RAFST--SPSPVDANGLKSMNLFSAINHALQIALESDPRAYVFG 62

Query: 1169 EDVGFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFP 990
            EDV FGGVFRCTTGLADRFGK RVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYI+P
Sbjct: 63   EDVSFGGVFRCTTGLADRFGKGRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIYP 122

Query: 989  AFDQIVSEAAKFRYRSGNQFNCGGLTIRSPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIP 810
            AFDQIV+EAAKFRYRSGNQFNCGGLTIR+PYGAVGHGGHYHSQSPE+FFCHVPG+KVVIP
Sbjct: 123  AFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGHGGHYHSQSPESFFCHVPGIKVVIP 182

Query: 809  RSPQQAKGLLLACIRDPNPTIFFEPKWLYRLAVEDVPEHDYMLPLSKAEVIRLGSDITLV 630
            RSP+QAKGLLL+CIRDPNP +FFEPKWLYRLAVE+VPEHDYMLPLS+AEVIR G+DITLV
Sbjct: 183  RSPKQAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEHDYMLPLSEAEVIRQGTDITLV 242

Query: 629  GWGAQLALMEQACIDAEKDGISCELIDLKTLIPWDKETVEASVRKTGKLLVSHEAPITGG 450
            GWGAQLA+MEQACIDAEK+GISCELIDL+TL+PWDKETVEASVRKTG+LLVSHEAP+TGG
Sbjct: 243  GWGAQLAVMEQACIDAEKEGISCELIDLRTLLPWDKETVEASVRKTGRLLVSHEAPVTGG 302

Query: 449  FGAEIAASISESCFLRV 399
            FGAEI+AS+ E CFLR+
Sbjct: 303  FGAEISASMVERCFLRL 319



 Score = 82.8 bits (203), Expect(2) = e-168
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -1

Query: 348 LEAPIARICGLDTPFPLVFEPFYMPTKNKIFDAIKATVNY 229
           LEAP+AR+CGLDTPFPLVFEPFYMPTKNKI DAIK+TVNY
Sbjct: 319 LEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 358