BLASTX nr result

ID: Coptis24_contig00010981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010981
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329514.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-25
ref|XP_002326722.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-25
ref|XP_002278180.1| PREDICTED: uncharacterized protein LOC100248...   120   7e-25
emb|CAN80329.1| hypothetical protein VITISV_002989 [Vitis vinifera]   120   1e-24
ref|XP_002515194.1| LRX2, putative [Ricinus communis] gi|2235456...   118   4e-24

>ref|XP_002329514.1| predicted protein [Populus trichocarpa] gi|222870223|gb|EEF07354.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  123 bits (309), Expect = 1e-25
 Identities = 115/330 (34%), Positives = 123/330 (37%), Gaps = 31/330 (9%)
 Frame = +1

Query: 19  DHLGVNKIGKNIRKSPLHXXXXXXXXXXXXXXXXXXXXXXHVYNISKNDFRNIVQQLTGX 198
           DHLGVNKIGKNI+KSPLH                       VYNISKNDFRNIVQQLTG 
Sbjct: 10  DHLGVNKIGKNIKKSPLH-------QPNFANNPNRQQPQPQVYNISKNDFRNIVQQLTG- 61

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIARPQ-XXXXXXXXXXXXXXXXXG 375
                                  MRLQ+IRPPPL+PI RP                    
Sbjct: 62  ----SPSQEPLPRPPQNPPKPQSMRLQKIRPPPLTPINRPHIPPPVPAPAVAPPVPYHNA 117

Query: 376 FVRXXXXXXXXXXXXXH---------GDAGWNTTAESPISAYMRYLQNSMNGGPSPRXXX 528
           FVR                       GD+GW +TAESPISAYMRYLQN+M   P PR   
Sbjct: 118 FVRPGMPHPPGQFGLPSPTMTPPFIPGDSGWASTAESPISAYMRYLQNTMI-DPGPRGNQ 176

Query: 529 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-----GGNGP-------------- 651
                                                    G NGP              
Sbjct: 177 AQSPLQPHPPLPQGRGQIQPQHQPPSGGLLLNPPLAPVPTPGVNGPAPPMPNLPSPWMNG 236

Query: 652 -PLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXXTPGF-FSPFSHQSGILXX 825
            P LPSPTSQFLLPSP+ YMN                     TP F FSP + QSGIL  
Sbjct: 237 PPCLPSPTSQFLLPSPTGYMN-LLSPRSPYPLLSPGVQFPPLTPNFAFSPMA-QSGIL-G 293

Query: 826 XXXXXXXXXXXXXXXXXXXXXVLSPRWRDQ 915
                                V SPRWRDQ
Sbjct: 294 PGPQPPPSPGFFPLSPSGFFPVSSPRWRDQ 323


>ref|XP_002326722.1| predicted protein [Populus trichocarpa] gi|222834044|gb|EEE72521.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  122 bits (306), Expect = 2e-25
 Identities = 106/298 (35%), Positives = 115/298 (38%), Gaps = 31/298 (10%)
 Frame = +1

Query: 19  DHLGVNKIGKNIRKSPLHXXXXXXXXXXXXXXXXXXXXXXHVYNISKNDFRNIVQQLTGX 198
           DHLGVNKIGKNI+KSPLH                       VYNISKNDFRNIVQQLTG 
Sbjct: 10  DHLGVNKIGKNIKKSPLH-------QPNFANNPNRQQPQPQVYNISKNDFRNIVQQLTG- 61

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIARPQ--XXXXXXXXXXXXXXXXX 372
                                  MRLQ+IRPPPL+PI RP                    
Sbjct: 62  ----SPSQEPLPRPPNNPPKPQSMRLQKIRPPPLTPINRPHVPPPFPAPAVAPPPVPYHN 117

Query: 373 GFVRXXXXXXXXXXXXXH---------GDAGWNTTAESPISAYMRYLQNSM-------NG 504
            FVR                       GD+GW  TAESPISAYMRYLQNS+       N 
Sbjct: 118 AFVRPGMLPPPSQFGLPSPTMMPPLTPGDSGWANTAESPISAYMRYLQNSIIDPGSWGNQ 177

Query: 505 GPSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGG------------NG 648
              PR                                       G             NG
Sbjct: 178 TQPPRQPYPPLPQGPGQIQPQHQPPSGGLLPNPHLPQVPTPGANGPVPYMPNLPSPRMNG 237

Query: 649 PPLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXXTPGF-FSPFSHQSGIL 819
           PPLLPSPTSQFLLPSP+ YM+                     TP F FSP + QSG+L
Sbjct: 238 PPLLPSPTSQFLLPSPTGYMS-LLSPRSPYPLLPPGIQFRPLTPNFAFSPMA-QSGVL 293


>ref|XP_002278180.1| PREDICTED: uncharacterized protein LOC100248947 [Vitis vinifera]
          Length = 307

 Score =  120 bits (302), Expect = 7e-25
 Identities = 107/314 (34%), Positives = 115/314 (36%), Gaps = 16/314 (5%)
 Frame = +1

Query: 19  DHLGVNKIGKNIRKSPLHXXXXXXXXXXXXXXXXXXXXXXHVYNISKNDFRNIVQQLTGX 198
           +HLGVNKIGKNIRKSPLH                       VYNISKNDFRNIVQQLTG 
Sbjct: 9   EHLGVNKIGKNIRKSPLH--------QPNFGNTARQQPQPQVYNISKNDFRNIVQQLTG- 59

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIARPQ--------XXXXXXXXXXX 354
                                  MRLQRIRPPPLSPI RP                    
Sbjct: 60  ----SPSQEPLPRPPQNPPKHPSMRLQRIRPPPLSPINRPHIPPPALVPAPAPALAPAPG 115

Query: 355 XXXXXXGFVRXXXXXXXXXXXXXH----GDAGWNTTAESPISAYMRYLQNS-MNGGPSPR 519
                 G VR                  GD  W   AESPISAYMRYLQNS ++ GP P 
Sbjct: 116 QVPYNHGLVRPPPQFAQPHPMPVQPLMPGDTSWTHVAESPISAYMRYLQNSIIDSGPRPP 175

Query: 520 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNGPPLLPSPTSQFLLPSPS 699
                                                    NGP LLPSPTSQ+  PSPS
Sbjct: 176 LGQGPPRLQSPVLGSVQAQPPVSGLIPNPHVPPFPSPRM--NGPALLPSPTSQYPFPSPS 233

Query: 700 AYMNXXXXXXXXXXXXXXXXXXXXXTPGF-FSPFSHQSGILXXXXXXXXXXXXXXXXXXX 876
            ++N                     TP F FSP +  SGIL                   
Sbjct: 234 GFLNLLSPRSPYPLLSPGYQFPPPLTPNFSFSPMA-GSGILGPGPQPPPSPGIVFPLSPS 292

Query: 877 XXXXVL--SPRWRD 912
               +   SPRWRD
Sbjct: 293 GFFPLTSPSPRWRD 306


>emb|CAN80329.1| hypothetical protein VITISV_002989 [Vitis vinifera]
          Length = 307

 Score =  120 bits (300), Expect = 1e-24
 Identities = 108/314 (34%), Positives = 116/314 (36%), Gaps = 16/314 (5%)
 Frame = +1

Query: 19  DHLGVNKIGKNIRKSPLHXXXXXXXXXXXXXXXXXXXXXXHVYNISKNDFRNIVQQLTGX 198
           +HLGVNKIGKNIRKSPLH                       VYNISKNDFRNIVQQLTG 
Sbjct: 9   EHLGVNKIGKNIRKSPLH--------QPNFGNTARQQPQPQVYNISKNDFRNIVQQLTG- 59

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIARPQ--------XXXXXXXXXXX 354
                                  MRLQRIRPPPLSPI RP                    
Sbjct: 60  ----SPSQEPLPRPPQNPPKHPSMRLQRIRPPPLSPINRPHIPPPALVPAPAPALAPAPG 115

Query: 355 XXXXXXGFVRXXXXXXXXXXXXXH----GDAGWNTTAESPISAYMRYLQNS-MNGGPSPR 519
                 G VR                  GD  W   AESPISAYMRYLQNS ++ GP P 
Sbjct: 116 QVPYNHGLVRPPPQFXQPHPMPVQPLMPGDTSWTHVAESPISAYMRYLQNSIIDSGPRPP 175

Query: 520 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNGPPLLPSPTSQFLLPSPS 699
                                                    NGP LLPSPTSQ+  PSPS
Sbjct: 176 LGQGPPRLQSPVLGTVQAQPPVSGLIPNPHVPPFPSPR--VNGPALLPSPTSQYPFPSPS 233

Query: 700 AYMNXXXXXXXXXXXXXXXXXXXXXTPGF-FSPFSHQSGILXXXXXXXXXXXXXXXXXXX 876
            ++N                     TP F FSP +  SGIL                   
Sbjct: 234 GFLNLLSPRSPYPLLSPGYQFPPPLTPNFSFSPMA-GSGILGPGPQPPPSPGIVFPLSPS 292

Query: 877 XXXXVLS--PRWRD 912
               + S  PRWRD
Sbjct: 293 GFFPLTSPXPRWRD 306


>ref|XP_002515194.1| LRX2, putative [Ricinus communis] gi|223545674|gb|EEF47178.1| LRX2,
           putative [Ricinus communis]
          Length = 321

 Score =  118 bits (295), Expect = 4e-24
 Identities = 109/322 (33%), Positives = 117/322 (36%), Gaps = 23/322 (7%)
 Frame = +1

Query: 19  DHLGVNKIGKNIRKSPLHXXXXXXXXXXXXXXXXXXXXXXHVYNISKNDFRNIVQQLTGX 198
           D LGVNK+GKNIRKSPLH                       VYNISKNDFRNIVQQLTG 
Sbjct: 11  DPLGVNKLGKNIRKSPLHQPNFANNANNANRQQPQP----QVYNISKNDFRNIVQQLTG- 65

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXMRLQRIRPPPLSPIARPQ---XXXXXXXXXXXXXXXX 369
                                  MRLQ+IRPPPL+PI RP                    
Sbjct: 66  ----SPSQEPLPRPPQNPPKPQSMRLQKIRPPPLTPINRPHIPPPVPAPAVAPPPPVPFN 121

Query: 370 XGFVR---XXXXXXXXXXXXXHGDAGWNTTAESPISAYMRYLQNSMNGGPSPRXXXXXXX 540
             F R                 GD+ W  TAESPISAYMRYLQNS+   PSPR       
Sbjct: 122 NNFARPGQFGHPSPTMMPPMAPGDSAWANTAESPISAYMRYLQNSIM-DPSPRGNQAQPS 180

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGG-NGP---------------PLLPSPT 672
                                              NGP                LLPSPT
Sbjct: 181 LQQLQAQGPAYIHPQPPSSGLLPNPHMPALPSPRLNGPVPHVTNLPSPQMNGPALLPSPT 240

Query: 673 SQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXXTPGF-FSPFSHQSGILXXXXXXXXXX 849
           SQFLLPSP+ YMN                        F FSP + QSGIL          
Sbjct: 241 SQFLLPSPTGYMNLLSPRSPYPFYSPGVQFPPPLAHNFTFSPMA-QSGILGPGPQPPPSP 299

Query: 850 XXXXXXXXXXXXXVLSPRWRDQ 915
                        + SPRWRDQ
Sbjct: 300 GLVFPLSPTGFFPLSSPRWRDQ 321


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