BLASTX nr result

ID: Coptis24_contig00010979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010979
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638638.1| Serine/threonine protein phosphatase 2A 55 k...   303   2e-80
gb|AAG29595.1|AF196288_1 Ser/Thr specific protein phosphatase 2A...   299   2e-79
ref|XP_003638639.1| Serine/threonine protein phosphatase 2A 55 k...   295   3e-78
ref|XP_002308570.1| predicted protein [Populus trichocarpa] gi|2...   295   3e-78
ref|XP_003546654.1| PREDICTED: serine/threonine protein phosphat...   295   4e-78

>ref|XP_003638638.1| Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
           beta isoform [Medicago truncatula]
           gi|355504573|gb|AES85776.1| Serine/threonine protein
           phosphatase 2A 55 kDa regulatory subunit B beta isoform
           [Medicago truncatula]
          Length = 652

 Score =  303 bits (776), Expect = 2e-80
 Identities = 155/225 (68%), Positives = 168/225 (74%), Gaps = 20/225 (8%)
 Frame = +2

Query: 2   DWKFSQVFGERAAGEEVQEVDIISAIEFDKSGEHLATGDRGGRVVLFERTDGNDRAIRKD 181
           +WKFSQVFGERAAGEEVQEVDIISAIEFDKSG+HLATGDRGGRVVLFERTD  D   R D
Sbjct: 19  EWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSKDHGSRSD 78

Query: 182 LEKLDYLGNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVRWCQSANGALFLLSTNDK 361
           LE++DY  NRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK++WCQ+ANGA+FLLSTNDK
Sbjct: 79  LERMDYSVNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGAVFLLSTNDK 138

Query: 362 TXXXXXXXXXXXXXICDMNIDSSDTVANGRIDSQS------------GP--------ASD 481
           T             I DMNIDSS    NG I S S            GP        ++D
Sbjct: 139 TIKFWKVQEKKVKKISDMNIDSSKATGNGSIASSSNSSSSKPHLANGGPSDKSYSYLSND 198

Query: 482 FVFHPGGYSSLHLPLVIGHETNLVPRCRRVYAHAHDYHINSISNN 616
           F F PGG  SL LP V+ HET+L+ RCRRVYAHAHDYHINSISNN
Sbjct: 199 FSFPPGGLPSLKLPSVVSHETSLLARCRRVYAHAHDYHINSISNN 243


>gb|AAG29595.1|AF196288_1 Ser/Thr specific protein phosphatase 2A B regulatory subunit alpha
           isoform [Medicago sativa subsp. x varia]
          Length = 515

 Score =  299 bits (766), Expect = 2e-79
 Identities = 155/226 (68%), Positives = 170/226 (75%), Gaps = 21/226 (9%)
 Frame = +2

Query: 2   DWKFSQVFGERAAGEEVQEVDIISAIEFDKSGEHLATGDRGGRVVLFERTDGNDR-AIRK 178
           +WKFSQVFGERAAGEEVQEVDIISAIEFDKSG+HLATGDRGGRVVLFERTD  D+   R 
Sbjct: 19  EWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSKDQHGSRS 78

Query: 179 DLEKLDYLGNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVRWCQSANGALFLLSTND 358
           DLE++DY  NRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK++WCQ+ANGA+FLLSTND
Sbjct: 79  DLERMDYSVNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGAVFLLSTND 138

Query: 359 KTXXXXXXXXXXXXXICDMNIDSSDTVANGRIDSQS------------GP--------AS 478
           KT             I DMNIDSS  + NG I S S            GP        ++
Sbjct: 139 KTIKFWKVQEKKVKKISDMNIDSSKAMGNGSIASSSNSSSSKPHLANGGPSDKSYSYLSN 198

Query: 479 DFVFHPGGYSSLHLPLVIGHETNLVPRCRRVYAHAHDYHINSISNN 616
           DF F PGG  SL LP V+ HET+L+ RCRRVYAHAHDYHINSISNN
Sbjct: 199 DFSFPPGGLPSLKLPSVVSHETSLLARCRRVYAHAHDYHINSISNN 244


>ref|XP_003638639.1| Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
           beta isoform [Medicago truncatula]
           gi|355504574|gb|AES85777.1| Serine/threonine protein
           phosphatase 2A 55 kDa regulatory subunit B beta isoform
           [Medicago truncatula]
          Length = 654

 Score =  295 bits (756), Expect = 3e-78
 Identities = 155/227 (68%), Positives = 170/227 (74%), Gaps = 22/227 (9%)
 Frame = +2

Query: 2   DWKFSQVFGERAAGEEVQEVDIISAIEFDKSGEHLATGDRGGRVVLFERTDGNDR-AIRK 178
           +WKFSQVFGERAAGEEVQEVDIISAIEFDKSG+HLATGDRGGRVVLFERTD  D+   R 
Sbjct: 19  EWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSKDQHGSRS 78

Query: 179 DLEKLDYLGNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVRWCQSANGALFLLSTND 358
           DLE++DY  NRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK++WCQ+ANGA+FLLSTND
Sbjct: 79  DLERMDYSVNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGAVFLLSTND 138

Query: 359 KTXXXXXXXXXXXXXICDMNIDSSDTVANGRIDSQS------------GP--------AS 478
           KT             I DMNIDSS    NG I S S            GP        ++
Sbjct: 139 KTIKFWKVQEKKVKKISDMNIDSSKATGNGSIASSSNSSSSKPHLANGGPSDKSYSYLSN 198

Query: 479 DFVFHPGGYSSLHLP-LVIGHETNLVPRCRRVYAHAHDYHINSISNN 616
           DF F PGG  SL LP +V+ HET+L+ RCRRVYAHAHDYHINSISNN
Sbjct: 199 DFSFPPGGLPSLKLPSVVVSHETSLLARCRRVYAHAHDYHINSISNN 245


>ref|XP_002308570.1| predicted protein [Populus trichocarpa] gi|222854546|gb|EEE92093.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  295 bits (756), Expect = 3e-78
 Identities = 148/225 (65%), Positives = 168/225 (74%), Gaps = 20/225 (8%)
 Frame = +2

Query: 2   DWKFSQVFGERAAGEEVQEVDIISAIEFDKSGEHLATGDRGGRVVLFERTDGNDRA-IRK 178
           +WKF+QVFGER AGEEVQEVDIISAIEFD++G+HLATGDRGGRVVLFERTD  D    R+
Sbjct: 27  EWKFAQVFGERTAGEEVQEVDIISAIEFDRTGDHLATGDRGGRVVLFERTDTRDHGGNRR 86

Query: 179 DLEKLDYLGNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVRWCQSANGALFLLSTND 358
           DLE++D+  NRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK++WCQSANGALFLLSTND
Sbjct: 87  DLERMDFPINRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQSANGALFLLSTND 146

Query: 359 KTXXXXXXXXXXXXXICDMNIDSSDTVANGR-------------------IDSQSGPASD 481
           KT             ICDMN+D +    NG                    +D   G ++D
Sbjct: 147 KTIKFWKVQEKKVKKICDMNVDPAKAAGNGPLVGPSISTSSKPYTANGGCLDKPLGLSND 206

Query: 482 FVFHPGGYSSLHLPLVIGHETNLVPRCRRVYAHAHDYHINSISNN 616
           F F PGG SSLHLP++   ET+LVPRCRR+YAHAHDYHINSISNN
Sbjct: 207 FSFPPGGVSSLHLPVLTSIETSLVPRCRRIYAHAHDYHINSISNN 251


>ref|XP_003546654.1| PREDICTED: serine/threonine protein phosphatase 2A 55 kDa
           regulatory subunit B beta isoform-like [Glycine max]
          Length = 514

 Score =  295 bits (755), Expect = 4e-78
 Identities = 152/225 (67%), Positives = 166/225 (73%), Gaps = 20/225 (8%)
 Frame = +2

Query: 2   DWKFSQVFGERAAGEEVQEVDIISAIEFDKSGEHLATGDRGGRVVLFERTDGNDRA-IRK 178
           +WKFSQVFGER AGEEVQEVDIISAIEFDKSG+HLATGDRGGRVVLFERTD  D    R+
Sbjct: 19  EWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGGSRR 78

Query: 179 DLEKLDYLGNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVRWCQSANGALFLLSTND 358
           DLE++DY   RHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK+RWCQ+ANGALFLLSTND
Sbjct: 79  DLERMDYSIGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTND 138

Query: 359 KTXXXXXXXXXXXXXICDMNIDSSDTVANGRIDSQSGPAS-------------------D 481
           KT             I +MN+D S ++ NG I S S  +S                   D
Sbjct: 139 KTIKFWKVQEKKVKKISEMNVDPSKSMGNGSIASSSNSSSSRPYLVNGGSPDRYNYISND 198

Query: 482 FVFHPGGYSSLHLPLVIGHETNLVPRCRRVYAHAHDYHINSISNN 616
           F F PGG  SL LP+V  HET+LV RCRRVYAHAHDYHINSISNN
Sbjct: 199 FSFPPGGLPSLRLPMVSSHETSLVARCRRVYAHAHDYHINSISNN 243


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