BLASTX nr result
ID: Coptis24_contig00010978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010978
(938 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33109.3| unnamed protein product [Vitis vinifera] 116 2e-33
ref|XP_002278144.1| PREDICTED: uncharacterized protein LOC100257... 116 2e-33
ref|XP_002520561.1| conserved hypothetical protein [Ricinus comm... 93 1e-24
ref|XP_004134798.1| PREDICTED: uncharacterized protein LOC101207... 96 1e-23
ref|XP_002322529.1| predicted protein [Populus trichocarpa] gi|2... 92 4e-22
>emb|CBI33109.3| unnamed protein product [Vitis vinifera]
Length = 225
Score = 116 bits (291), Expect(2) = 2e-33
Identities = 67/143 (46%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Frame = -3
Query: 900 MAQVVNLRPTLN-YSSLSATRPINSSRGFCP-VRNPEWKNLQLKLNCKGRYTCLFSNNRK 727
MAQ++ LRP + + S +TR ++ CP NP+W LQ KL C GR++CLFSNNRK
Sbjct: 18 MAQLLTLRPPITAFRSAPSTRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFSCLFSNNRK 77
Query: 726 GEEQARNALESALGGKRIEFEKWDKEIQKREEMXXXXXXXXXXXXXXXXXXXXXXGDHFW 547
+E+AR ALESALGGK+ EFEKW+KEI+KREE+ DHFW
Sbjct: 78 -QEEARKALESALGGKKDEFEKWNKEIKKREEVGGGGEAGGGGWFGWGGRFGWSNDDHFW 136
Query: 546 EEAQQASXXXXXXXXXXXXIAKG 478
+EAQQAS IAKG
Sbjct: 137 QEAQQASLAILGIIIMYLIIAKG 159
Score = 52.8 bits (125), Expect(2) = 2e-33
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 383 RGVRNGLAYIKLNILRKISPAGTYGVPDNTQKEEILSNLSAKESVVRKWASD 228
RG RNG +I IL+K+SPA G+ DN K+E+ + +SAKESVVRKW +
Sbjct: 175 RGTRNGFNFIISRILQKVSPATHTGL-DNMPKKEVYTPVSAKESVVRKWGGE 225
>ref|XP_002278144.1| PREDICTED: uncharacterized protein LOC100257020 [Vitis vinifera]
Length = 208
Score = 116 bits (291), Expect(2) = 2e-33
Identities = 67/143 (46%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Frame = -3
Query: 900 MAQVVNLRPTLN-YSSLSATRPINSSRGFCP-VRNPEWKNLQLKLNCKGRYTCLFSNNRK 727
MAQ++ LRP + + S +TR ++ CP NP+W LQ KL C GR++CLFSNNRK
Sbjct: 1 MAQLLTLRPPITAFRSAPSTRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFSCLFSNNRK 60
Query: 726 GEEQARNALESALGGKRIEFEKWDKEIQKREEMXXXXXXXXXXXXXXXXXXXXXXGDHFW 547
+E+AR ALESALGGK+ EFEKW+KEI+KREE+ DHFW
Sbjct: 61 -QEEARKALESALGGKKDEFEKWNKEIKKREEVGGGGEAGGGGWFGWGGRFGWSNDDHFW 119
Query: 546 EEAQQASXXXXXXXXXXXXIAKG 478
+EAQQAS IAKG
Sbjct: 120 QEAQQASLAILGIIIMYLIIAKG 142
Score = 52.8 bits (125), Expect(2) = 2e-33
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 383 RGVRNGLAYIKLNILRKISPAGTYGVPDNTQKEEILSNLSAKESVVRKWASD 228
RG RNG +I IL+K+SPA G+ DN K+E+ + +SAKESVVRKW +
Sbjct: 158 RGTRNGFNFIISRILQKVSPATHTGL-DNMPKKEVYTPVSAKESVVRKWGGE 208
>ref|XP_002520561.1| conserved hypothetical protein [Ricinus communis]
gi|223540221|gb|EEF41794.1| conserved hypothetical
protein [Ricinus communis]
Length = 206
Score = 92.8 bits (229), Expect(2) = 1e-24
Identities = 62/146 (42%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Frame = -3
Query: 900 MAQVVNLRPTLNYSSLSA-TRPINSSRGFCPVRNPE--WKNLQLKLNCKGRYTCLFS--N 736
MAQVVNL +SLS +RP ++ F N + W +LQ +L C ++TCLFS +
Sbjct: 1 MAQVVNL------NSLSCWSRPDSAGLRFHDAENGKQSWVSLQQQLKCNAKFTCLFSGSS 54
Query: 735 NRKGEEQARNALESALGGKRIEFEKWDKEIQKREEMXXXXXXXXXXXXXXXXXXXXXXGD 556
+ + EEQAR ALESALGGK+ EFEKW+KEIQKREE GD
Sbjct: 55 SSRKEEQARKALESALGGKKSEFEKWNKEIQKREEAGGGGTSGGGGWFGWGGRFGWSNGD 114
Query: 555 HFWEEAQQASXXXXXXXXXXXXIAKG 478
+FW EAQQ + +AKG
Sbjct: 115 NFWPEAQQTALAILGIVAMYLVVAKG 140
Score = 47.4 bits (111), Expect(2) = 1e-24
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = -1
Query: 383 RGVRNGLAYIKLNILRKISPAGTYGVPDNTQKEEILSNLSAKESVVRKWASD 228
RG RNGLA+I IL+ SP D T K+++ SAKE V+RKW SD
Sbjct: 156 RGTRNGLAFISSRILKNTSPNSPADFGD-TSKKDVYVQASAKERVLRKWGSD 206
>ref|XP_004134798.1| PREDICTED: uncharacterized protein LOC101207146 [Cucumis sativus]
gi|449516315|ref|XP_004165192.1| PREDICTED:
uncharacterized protein LOC101231107 [Cucumis sativus]
Length = 208
Score = 95.9 bits (237), Expect(2) = 1e-23
Identities = 62/147 (42%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Frame = -3
Query: 900 MAQVVNLRPTLNYSSLSATRPINSSRGFCPVRNPE-----WKNLQLKLNCKGRYTCLFSN 736
M Q +NLRP +LS + + + P+R P W LQ KL C GR++CLFS+
Sbjct: 1 MLQALNLRPPPPILALSFSVSDDPTCSPLPLRRPRNPMHNWALLQSKLKCNGRFSCLFSD 60
Query: 735 NRKGEEQARNALESALGGKRIEFEKWDKEIQKREEM-XXXXXXXXXXXXXXXXXXXXXXG 559
NRK EEQAR ALESALGGK+ EFEKW+ EI+KREE+
Sbjct: 61 NRK-EEQARKALESALGGKKNEFEKWNNEIKKREEVGGGSGSGGGRGGWFGSGGWFGWSD 119
Query: 558 DHFWEEAQQASXXXXXXXXXXXXIAKG 478
D FW EAQQ S +AKG
Sbjct: 120 DQFWPEAQQTSLAVLGIIVMYLLVAKG 146
Score = 40.8 bits (94), Expect(2) = 1e-23
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -1
Query: 383 RGVRNGLAYIKLNILRKISPAGTYGVPDNTQKEEILSN--LSAKESVVRKWASD 228
RG RNGL ++ ILRK S + N + E++SN +SAK+ V RKW SD
Sbjct: 162 RGTRNGLTFVTSKILRKSSAS-------NYAEVEMISNKDVSAKDRVARKWGSD 208
>ref|XP_002322529.1| predicted protein [Populus trichocarpa] gi|222867159|gb|EEF04290.1|
predicted protein [Populus trichocarpa]
Length = 206
Score = 92.4 bits (228), Expect(2) = 4e-22
Identities = 59/146 (40%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Frame = -3
Query: 900 MAQVVNLRPTLNYSSLSATRPINSSRGFCPVRNPE-----WKNLQLKLNCKGRYTCLFSN 736
MAQV+++ P S+TRP ++ F R + W +LQ + C G++TCLFS
Sbjct: 1 MAQVLHINPLR-----SSTRPESNGTLFLSQRQKQDVKHSWTSLQREFKCNGKFTCLFSG 55
Query: 735 NRKGEEQARNALESALGGKRIEFEKWDKEIQKREEMXXXXXXXXXXXXXXXXXXXXXXGD 556
+ EEQA+ ALESALGGK+ EFEKW+KEI++REE GD
Sbjct: 56 GGR-EEQAKKALESALGGKKDEFEKWNKEIKRREEAGGGGDSGGGGWFGWGGRFGWSNGD 114
Query: 555 HFWEEAQQASXXXXXXXXXXXXIAKG 478
+FW EAQQAS IAKG
Sbjct: 115 NFWPEAQQASLAVLGIIAMYLIIAKG 140
Score = 39.3 bits (90), Expect(2) = 4e-22
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = -1
Query: 383 RGVRNGLAYIKLNILRKISPAGTYGVPDNTQKEEILSNLSAKESVVRKWASD 228
RG RNGL ++ +LRK SP K + +SAKESV RKW S+
Sbjct: 156 RGTRNGLTFMSSKMLRKASPDDPADFA-GALKNGVYVEVSAKESVKRKWGSN 206