BLASTX nr result
ID: Coptis24_contig00010946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010946
(472 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinu... 229 1e-58
ref|XP_002327568.1| predicted protein [Populus trichocarpa] gi|2... 228 4e-58
emb|CBI27342.3| unnamed protein product [Vitis vinifera] 224 6e-57
ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253... 224 6e-57
emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera] 224 6e-57
>ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534074|gb|EEF35792.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 1086
Score = 229 bits (585), Expect = 1e-58
Identities = 106/158 (67%), Positives = 128/158 (81%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 VESLNGIHMESVSCGEYHTCAVTFDGELYTWGDSGRGAGLGDR-RNKCQWLPHKVLGPLD 177
VESL+ +H++SV CGEY TCA+T GELYTWGD+ GA L D R + QWLP+K+ GPLD
Sbjct: 356 VESLDDVHIKSVVCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLD 415
Query: 178 GIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVA 357
GI +S VACGEWHTA+VS SGQLFTYG+GTFGVLGHG+++S+ KEV SL+GL VKSVA
Sbjct: 416 GITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVA 475
Query: 358 CGPWHTAAIVDVMVNHTNENAFSGKLFTWGDGDEGKLG 471
CG WHTAAIVD++ + NA GKLFTWGDGD+G+LG
Sbjct: 476 CGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLG 513
Score = 73.9 bits (180), Expect = 1e-11
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +1
Query: 34 VSCGEYHTCAVTFDGELYTWGDSGRGAGLGDRRNKCQWLPHKVLGPLDGIHVSGVACGEW 213
VSCG T A+T G++YT G S G LG+ + K + + V G L V ++ G +
Sbjct: 537 VSCGRMLTVALTNTGKVYTMGSSVHGQ-LGNPQAKDKSITI-VEGKLKEEFVKEISSGSY 594
Query: 214 HTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVACGPWHTAAI-VD 390
H AV++S G ++T+G+G G LG GN++ V++L+ V+S+ACG TAAI +
Sbjct: 595 HVAVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICLH 654
Query: 391 VMVNHTNENAFSGKLFTWG 447
++ T++++ SG +G
Sbjct: 655 KSISVTDQSSCSGCRMPFG 673
Score = 65.1 bits (157), Expect = 6e-09
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = +1
Query: 79 ELYTWGDSGRGAGLGDRRNKC--------QWLPHKVLGPLDGIHVSGVACGEWHTAVVSS 234
++ WG+ G +G + L K+L + V ++ G H A+++
Sbjct: 268 DVLMWGEGVEGGNIGGMVQRLGNQSVMQVDALVPKLLESTAMLDVRSISLGRKHAALITK 327
Query: 235 SGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVACGPWHTAAIVDVMVNHTNE 414
G++F +G+G+ G LGH + K V+SL + +KSV CG + T A+
Sbjct: 328 RGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCAL---------- 377
Query: 415 NAFSGKLFTWGDGDEG 462
SG+L+TWGD G
Sbjct: 378 -THSGELYTWGDNKNG 392
>ref|XP_002327568.1| predicted protein [Populus trichocarpa] gi|222836122|gb|EEE74543.1|
predicted protein [Populus trichocarpa]
Length = 973
Score = 228 bits (581), Expect = 4e-58
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 VESLNGIHMESVSCGEYHTCAVTFDGELYTWGDSGRGAGLG-DRRNKCQWLPHKVLGPLD 177
VESL+G+H++SV+CGEY TCA+T GELY WG++ GA LG + R++ QWLP ++ GPL
Sbjct: 351 VESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLT 410
Query: 178 GIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVA 357
G+ + VACG+WHTA+VSSSGQLFTYG+G+FGVLGHGN+ S+ Q KEV+SLKGL VKSVA
Sbjct: 411 GVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVA 470
Query: 358 CGPWHTAAIVDVMVNHTNENAFSGKLFTWGDGDEGKLG 471
CG WHTAAIVD++V+ N GKLFTWGDGD+G+LG
Sbjct: 471 CGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLG 508
Score = 77.8 bits (190), Expect = 9e-13
Identities = 50/128 (39%), Positives = 74/128 (57%)
Frame = +1
Query: 1 VESLNGIHMESVSCGEYHTCAVTFDGELYTWGDSGRGAGLGDRRNKCQWLPHKVLGPLDG 180
V L + + VSCG T A+T G++YT G S G LG+ K + + V G L
Sbjct: 521 VAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQ-LGNPHAKDKSIVI-VEGKLKE 578
Query: 181 IHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVAC 360
V ++ G +H A ++SSG L+T+G+GT G LG GNV+ V++L+ ++V+S+AC
Sbjct: 579 EFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIAC 638
Query: 361 GPWHTAAI 384
G TAAI
Sbjct: 639 GSNLTAAI 646
Score = 68.2 bits (165), Expect = 7e-10
Identities = 34/94 (36%), Positives = 53/94 (56%)
Frame = +1
Query: 181 IHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVAC 360
+ V+ ++ G H A+++ G++F +GEG+ G LGH + K V+SL G+ VKSVAC
Sbjct: 305 LDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVAC 364
Query: 361 GPWHTAAIVDVMVNHTNENAFSGKLFTWGDGDEG 462
G + T A+ D SG+L+ WG+ G
Sbjct: 365 GEYQTCALTD-----------SGELYAWGENKYG 387
>emb|CBI27342.3| unnamed protein product [Vitis vinifera]
Length = 925
Score = 224 bits (571), Expect = 6e-57
Identities = 102/158 (64%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 VESLNGIHMESVSCGEYHTCAVTFDGELYTWGDSGRGAGL-GDRRNKCQWLPHKVLGPLD 177
VESL G+ ++SVSCGEY TCA+T GELYTWGD+G G L G+RR + QW+P ++ GPL+
Sbjct: 301 VESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLN 360
Query: 178 GIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVA 357
G +S VACGEWH A+VS+SGQLFTYG+GTFGVLGHG ++S+ Q KEV+SL GL VK+ A
Sbjct: 361 GTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAA 420
Query: 358 CGPWHTAAIVDVMVNHTNENAFSGKLFTWGDGDEGKLG 471
CGPWHTAAIV+V + N GKLFTWGDGD+G+LG
Sbjct: 421 CGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLG 458
Score = 67.8 bits (164), Expect = 9e-10
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Frame = +1
Query: 79 ELYTWGDSGRGAGLGD------RRNKCQW--LPHKVLGPLDGIHVSGVACGEWHTAVVSS 234
++ WG+ G LG +N Q L K+L + V ++ G H A+V+
Sbjct: 213 DVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTK 272
Query: 235 SGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVACGPWHTAAIVDVMVNHTNE 414
G++F +GEG+ G LGH M K V+SL G+ VKSV+CG + T A+
Sbjct: 273 HGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCAL---------- 322
Query: 415 NAFSGKLFTWGDGDEG 462
SG+L+TWGD G
Sbjct: 323 -THSGELYTWGDNGSG 337
>ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
Length = 1023
Score = 224 bits (571), Expect = 6e-57
Identities = 102/158 (64%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 VESLNGIHMESVSCGEYHTCAVTFDGELYTWGDSGRGAGL-GDRRNKCQWLPHKVLGPLD 177
VESL G+ ++SVSCGEY TCA+T GELYTWGD+G G L G+RR + QW+P ++ GPL+
Sbjct: 353 VESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLN 412
Query: 178 GIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVA 357
G +S VACGEWH A+VS+SGQLFTYG+GTFGVLGHG ++S+ Q KEV+SL GL VK+ A
Sbjct: 413 GTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAA 472
Query: 358 CGPWHTAAIVDVMVNHTNENAFSGKLFTWGDGDEGKLG 471
CGPWHTAAIV+V + N GKLFTWGDGD+G+LG
Sbjct: 473 CGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLG 510
Score = 67.8 bits (164), Expect = 9e-10
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Frame = +1
Query: 79 ELYTWGDSGRGAGLGD------RRNKCQW--LPHKVLGPLDGIHVSGVACGEWHTAVVSS 234
++ WG+ G LG +N Q L K+L + V ++ G H A+V+
Sbjct: 265 DVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTK 324
Query: 235 SGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVACGPWHTAAIVDVMVNHTNE 414
G++F +GEG+ G LGH M K V+SL G+ VKSV+CG + T A+
Sbjct: 325 HGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCAL---------- 374
Query: 415 NAFSGKLFTWGDGDEG 462
SG+L+TWGD G
Sbjct: 375 -THSGELYTWGDNGSG 389
>emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 224 bits (571), Expect = 6e-57
Identities = 102/158 (64%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 VESLNGIHMESVSCGEYHTCAVTFDGELYTWGDSGRGAGL-GDRRNKCQWLPHKVLGPLD 177
VESL G+ ++SVSCGEY TCA+T GELYTWGD+G G L G+RR + QW+P ++ GPL+
Sbjct: 353 VESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLN 412
Query: 178 GIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVA 357
G +S VACGEWH A+VS+SGQLFTYG+GTFGVLGHG ++S+ Q KEV+SL GL VK+ A
Sbjct: 413 GTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAA 472
Query: 358 CGPWHTAAIVDVMVNHTNENAFSGKLFTWGDGDEGKLG 471
CGPWHTAAIV+V + N GKLFTWGDGD+G+LG
Sbjct: 473 CGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLG 510
Score = 73.2 bits (178), Expect = 2e-11
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 62/211 (29%)
Frame = +1
Query: 1 VESLNGIHMESVSCGEYHTCAV-----------TFDGELYTWGDSGRGA-GLGDRRNK-- 138
VESL+G+ +++ +CG +HT A+ T G+L+TWGD +G G GD+ K
Sbjct: 460 VESLSGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL 519
Query: 139 ----CQWLPHKVL-------------------------------------------GPLD 177
Q + H + G L
Sbjct: 520 PTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLK 579
Query: 178 GIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVA 357
V ++ G +H A ++S G L+T+G G G LG G+ + V++L+ +V+S+A
Sbjct: 580 DEFVKEISSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIA 639
Query: 358 CGPWHTAAI-VDVMVNHTNENAFSGKLFTWG 447
CG TAAI + ++ T+++A SG +G
Sbjct: 640 CGSGFTAAICLHKSISSTDQSACSGCRMAFG 670
Score = 68.6 bits (166), Expect = 5e-10
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Frame = +1
Query: 79 ELYTWGDSGRGAGLGD------RRNKCQW--LPHKVLGPLDGIHVSGVACGEWHTAVVSS 234
++ WG+ G LG +N Q L K+L + V ++ G H A+V+
Sbjct: 265 DVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTK 324
Query: 235 SGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGLRVKSVACGPWHTAAIVDVMVNHTNE 414
G++F +GEG+ G LGH M K V+SL G+ VKSV+CG + T A+
Sbjct: 325 HGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCAL---------- 374
Query: 415 NAFSGKLFTWGDGDEG 462
SG+L+TWGD G
Sbjct: 375 -THSGELYTWGDNGSG 389