BLASTX nr result

ID: Coptis24_contig00010939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010939
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517011.1| phosphatidylcholine transfer protein, putati...   155   3e-36
ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263...   155   4e-36
emb|CAN65670.1| hypothetical protein VITISV_018339 [Vitis vinifera]   155   4e-36
gb|AFK44283.1| unknown [Medicago truncatula]                          153   1e-35
gb|AFK35199.1| unknown [Medicago truncatula]                          153   1e-35

>ref|XP_002517011.1| phosphatidylcholine transfer protein, putative [Ricinus communis]
           gi|223543646|gb|EEF45174.1| phosphatidylcholine transfer
           protein, putative [Ricinus communis]
          Length = 442

 Score =  155 bits (393), Expect = 3e-36
 Identities = 68/82 (82%), Positives = 77/82 (93%)
 Frame = -2

Query: 246 MDEIRYNFMEFMKKPAIVETFVDIILCSVPIWLAIMIGLVIGWSWRPRWTGLVFLGLRSK 67
           MDE  ++ MEF+K+P+I ETFVDI+LC+VPIWLA+MIGLVIGWSWRPRWTGLVFLGLRS+
Sbjct: 1   MDESFFDLMEFLKRPSITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLVFLGLRSR 60

Query: 66  FRFLWTAPPGFGARRLWFAFTA 1
           FRFLWTAPPGFGARRLW AFTA
Sbjct: 61  FRFLWTAPPGFGARRLWLAFTA 82


>ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263172 isoform 2 [Vitis
           vinifera]
          Length = 429

 Score =  155 bits (391), Expect = 4e-36
 Identities = 65/82 (79%), Positives = 79/82 (96%)
 Frame = -2

Query: 246 MDEIRYNFMEFMKKPAIVETFVDIILCSVPIWLAIMIGLVIGWSWRPRWTGLVFLGLRSK 67
           M++I ++FM+FMKKP+++ET +DI+LC+VPIW+A+MIGLVIGWSWRPRWTGLV+LGLRSK
Sbjct: 1   MEDIFFDFMDFMKKPSVIETLLDILLCAVPIWVAVMIGLVIGWSWRPRWTGLVYLGLRSK 60

Query: 66  FRFLWTAPPGFGARRLWFAFTA 1
           FRFLWTAPPGFGARRLW AFTA
Sbjct: 61  FRFLWTAPPGFGARRLWLAFTA 82


>emb|CAN65670.1| hypothetical protein VITISV_018339 [Vitis vinifera]
          Length = 410

 Score =  155 bits (391), Expect = 4e-36
 Identities = 65/82 (79%), Positives = 79/82 (96%)
 Frame = -2

Query: 246 MDEIRYNFMEFMKKPAIVETFVDIILCSVPIWLAIMIGLVIGWSWRPRWTGLVFLGLRSK 67
           M++I ++FM+FMKKP+++ET +DI+LC+VPIW+A+MIGLVIGWSWRPRWTGLV+LGLRSK
Sbjct: 1   MEDIFFDFMDFMKKPSVIETLLDILLCAVPIWVAVMIGLVIGWSWRPRWTGLVYLGLRSK 60

Query: 66  FRFLWTAPPGFGARRLWFAFTA 1
           FRFLWTAPPGFGARRLW AFTA
Sbjct: 61  FRFLWTAPPGFGARRLWLAFTA 82


>gb|AFK44283.1| unknown [Medicago truncatula]
          Length = 436

 Score =  153 bits (387), Expect = 1e-35
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -2

Query: 246 MDEIRYNFMEFMKKPAIVETFVDIILCSVPIWLAIMIGLVIGWSWRPRWTGLVFLGLRSK 67
           M++  ++ MEFMKKP+I ETFVDI+LC+VPIWLA+MIGLVIGWSWRPRWTGL+F+GLRSK
Sbjct: 1   MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLLFIGLRSK 60

Query: 66  FRFLWTAPPGFGARRLWFAFTA 1
           FRFLWT PPGFGARRLW AFTA
Sbjct: 61  FRFLWTVPPGFGARRLWLAFTA 82


>gb|AFK35199.1| unknown [Medicago truncatula]
          Length = 436

 Score =  153 bits (387), Expect = 1e-35
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -2

Query: 246 MDEIRYNFMEFMKKPAIVETFVDIILCSVPIWLAIMIGLVIGWSWRPRWTGLVFLGLRSK 67
           M++  ++ MEFMKKP+I ETFVDI+LC+VPIWLA+MIGLVIGWSWRPRWTGL+F+GLRSK
Sbjct: 1   MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLLFIGLRSK 60

Query: 66  FRFLWTAPPGFGARRLWFAFTA 1
           FRFLWT PPGFGARRLW AFTA
Sbjct: 61  FRFLWTVPPGFGARRLWLAFTA 82


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