BLASTX nr result
ID: Coptis24_contig00010929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010929
(1689 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin... 290 6e-76
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263... 281 3e-73
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera] 281 4e-73
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu... 270 9e-70
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2... 245 3e-62
>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
Length = 362
Score = 290 bits (743), Expect = 6e-76
Identities = 185/368 (50%), Positives = 207/368 (56%), Gaps = 13/368 (3%)
Frame = +3
Query: 210 SEAGIMSGRES-SYGIQKHQPVST--GTPNMRLGFSSDGTAVYKPILTTATTSPTYQQPI 380
SE GIMSGRES + G+QK PV + +MRL F+ DGTA+YKPI T++ P YQ
Sbjct: 5 SEPGIMSGRESFNVGMQK-SPVQSQPSMQSMRLAFAPDGTAIYKPITTSSPPPPPYQGGG 63
Query: 381 TA------ENAVATTVIPQGISTSINIGEQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXX 542
A + + P G++ IN+GE + DGTM
Sbjct: 64 GAGSTGGGDGPSPAAITPHGLN--INVGEPVKRKRGRPRKYGPDGTMSLALTTVSPTAAV 121
Query: 543 XXXXXXXXQQNVQPSGGFXXXXXXXXXXXXMKKSRGRPPGSGKKQQIAALGSAGIGFTPH 722
PS MKK+RGRPPGSGKKQQ+AALGSAGIGFTPH
Sbjct: 122 SPGSG-----GFSPSSAGAGNPASSASAEAMKKARGRPPGSGKKQQLAALGSAGIGFTPH 176
Query: 723 VITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXX 902
VITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEI
Sbjct: 177 VITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSL 236
Query: 903 XXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIADGRKDL 1082
QRSRTGGLSVS SPVQVVVGSFIADG+K+
Sbjct: 237 SGSFLLSESGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGKKE- 295
Query: 1083 KPNH---SEPAAAPAKLXXXXXXXXXXXXXXRGTLSE-XXXXXXXXLNHSTGACNNSNAQ 1250
P H S+P AP KL RGTLSE LN STG CNNSN Q
Sbjct: 296 -PKHTAPSDPTLAPGKLAAGGAAAGANSPPSRGTLSESSGGGPGSPLNQSTGTCNNSNQQ 354
Query: 1251 GMANVPWK 1274
G++N+PWK
Sbjct: 355 GLSNMPWK 362
>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
gi|297745600|emb|CBI40765.3| unnamed protein product
[Vitis vinifera]
Length = 353
Score = 281 bits (720), Expect = 3e-73
Identities = 181/369 (49%), Positives = 205/369 (55%), Gaps = 11/369 (2%)
Frame = +3
Query: 201 MSGSEAGIMSGRES-SYGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQ 374
MSGSE GIM+ RE S G+QK+ P NMRL FS DG AVYKP+ + TSP YQ
Sbjct: 1 MSGSETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQS 57
Query: 375 P--ITAENAVATTVIPQGISTSINIGEQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXXXX 548
+ + +IP G++ ++ E + DGTM
Sbjct: 58 SGGTGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV---- 112
Query: 549 XXXXXXQQNVQPSGGFXXXXXXXXXXXX---MKKSRGRPPGSGKKQQIAALGSAGIGFTP 719
NV SGG +KK+RGRPPGS KKQQ+ ALGSAG+GFTP
Sbjct: 113 --------NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTP 164
Query: 720 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXX 899
HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI
Sbjct: 165 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILS 224
Query: 900 XXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIADGRKD 1079
QRSRTGGLSVS SPVQVVVGSFIADGRK+
Sbjct: 225 LSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKE 284
Query: 1080 LK-PNHSEPAAAPAKL---XXXXXXXXXXXXXXRGTLSEXXXXXXXXLNHSTGACNNSNA 1247
K + EP++AP K+ RGTLSE LN STGACNNSN
Sbjct: 285 SKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNP 344
Query: 1248 QGMANVPWK 1274
GM ++PWK
Sbjct: 345 PGMTSIPWK 353
>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
Length = 390
Score = 281 bits (719), Expect = 4e-73
Identities = 186/394 (47%), Positives = 213/394 (54%), Gaps = 12/394 (3%)
Frame = +3
Query: 201 MSGSEAGIMSGRES-SYGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQ 374
MSGSE GIM+ RE S G+QK+ P NMRL FS DG AVYKP+ + TSP YQ
Sbjct: 1 MSGSETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQS 57
Query: 375 P--ITAENAVATTVIPQGISTSINIGEQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXXXX 548
+ + +IP G++ ++ E + DGTM
Sbjct: 58 SGGTGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV---- 112
Query: 549 XXXXXXQQNVQPSGGFXXXXXXXXXXXX---MKKSRGRPPGSGKKQQIAALGSAGIGFTP 719
NV SGG +KK+RGRPPGS KKQQ+ ALGSAG+GFTP
Sbjct: 113 --------NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTP 164
Query: 720 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXX 899
HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI
Sbjct: 165 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILS 224
Query: 900 XXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIADGRKD 1079
QRSRTGGLSVS SPVQVVVGSFIADGRK+
Sbjct: 225 LSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKE 284
Query: 1080 LK-PNHSEPAAAPAKL---XXXXXXXXXXXXXXRGTLSEXXXXXXXXLNHSTGACNNSNA 1247
K + EP++AP K+ RGTLSE LN STGACNNSN
Sbjct: 285 SKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNP 344
Query: 1248 QGMANVPWK*PS*FLTTSTPICVVG-LGLMNSFI 1346
GM ++PW P V G LG ++ F+
Sbjct: 345 PGMTSIPWNLTLLLAVKFQPSSVTGDLGRVSRFV 378
>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
gi|223551427|gb|EEF52913.1| DNA binding protein, putative
[Ricinus communis]
Length = 374
Score = 270 bits (690), Expect = 9e-70
Identities = 177/392 (45%), Positives = 204/392 (52%), Gaps = 34/392 (8%)
Frame = +3
Query: 201 MSGSEAGIM-SGRESSYGIQKHQPVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQP 377
MSGSE G+M S +G+ QPV NMRL F +DG++VYKP +TTAT SP+YQ
Sbjct: 1 MSGSETGVMTSTTREPFGVVSPQPV---IQNMRLAFGADGSSVYKP-MTTATNSPSYQP- 55
Query: 378 ITAENAVATTVIPQGISTSINIG-----EQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXX 542
+ +A + +G S IN+ + M DGTM
Sbjct: 56 --SPSAASPGGFVEGGSLGINVNMGSGNDAMKRKRGRPRKYGPDGTMALALVSAPQSVGI 113
Query: 543 XXXXXXXXQQNVQPSGGFXXXXXXXXXXXXM---------------------------KK 641
QP+GG + KK
Sbjct: 114 -----------TQPAGGGGFSTPTSAAATSVGPSTTTIAANPSLPSGSGGGSVSPTGIKK 162
Query: 642 SRGRPPGSGKKQQIAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSANGA 821
RGRPPGS KKQQ+ ALGSAG GFTPH+ITVKAGEDVSSKIMSFSQHGPRAVCILSANGA
Sbjct: 163 GRGRPPGSNKKQQLEALGSAGFGFTPHIITVKAGEDVSSKIMSFSQHGPRAVCILSANGA 222
Query: 822 ISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXX 1001
ISNVTLRQ ATSGG+VTYEGRFEI QRSRTGGLSVS
Sbjct: 223 ISNVTLRQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRSRTGGLSVSLSGPDGRVLGG 282
Query: 1002 XXXXXXXXXSPVQVVVGSFIADGRKDLK-PNHSEPAAAPAKLXXXXXXXXXXXXXXRGTL 1178
SPVQVVV SFI+D RK+LK PNH EP +A +L RGT
Sbjct: 283 GVAGLLLAASPVQVVVASFISDDRKELKSPNHLEPLSAMNRLTPVMGTTGPSSPPSRGTF 342
Query: 1179 SEXXXXXXXXLNHSTGACNNSNAQGMANVPWK 1274
SE LN STGACNNSN QG++++PWK
Sbjct: 343 SESSGGPGSPLNQSTGACNNSNLQGISSMPWK 374
>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
predicted protein [Populus trichocarpa]
Length = 272
Score = 245 bits (625), Expect = 3e-62
Identities = 131/215 (60%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Frame = +3
Query: 633 MKKSRGRPPGSGKKQQIAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSA 812
+KK+RGRPPGS KKQQ+ ALGSAG GFTPHVITVKAGED+SSK+MSFSQHGPRAVCILSA
Sbjct: 58 VKKARGRPPGSSKKQQLNALGSAGFGFTPHVITVKAGEDISSKVMSFSQHGPRAVCILSA 117
Query: 813 NGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXX 992
NGAISNVTLRQ ATSGGTVTYEGRFEI QRSR+GGLSV
Sbjct: 118 NGAISNVTLRQQATSGGTVTYEGRFEILALSGSYLPSENGGQRSRSGGLSVCLSGPDGRV 177
Query: 993 XXXXXXXXXXXXSPVQVVVGSFIADGRKDLK-PNHSEPAAAPAKLXXXXXXXXXXXXXXR 1169
+PVQVVVGSFIADGRK+ K NH+EP++A ++L R
Sbjct: 178 LGGTVAGLLVAAAPVQVVVGSFIADGRKESKTANHTEPSSATSRLPPRGGSTGVSSPPSR 237
Query: 1170 GTLSEXXXXXXXXLNHSTGACNNSNAQGMANVPWK 1274
GTLSE LN STGACNNSN QGM+++PW+
Sbjct: 238 GTLSESSGGPGSPLNQSTGACNNSNPQGMSSMPWE 272