BLASTX nr result

ID: Coptis24_contig00010926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010926
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40806.1| unknown [Picea sitchensis]                             221   4e-55
ref|XP_002336074.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-52
gb|ACN40106.1| unknown [Picea sitchensis]                             205   2e-50
gb|ABR17432.1| unknown [Picea sitchensis]                             205   2e-50
gb|ABK26347.1| unknown [Picea sitchensis]                             203   7e-50

>gb|ACN40806.1| unknown [Picea sitchensis]
          Length = 332

 Score =  221 bits (562), Expect = 4e-55
 Identities = 131/327 (40%), Positives = 183/327 (55%), Gaps = 20/327 (6%)
 Frame = -3

Query: 1131 EISIPEEK-VFAGAVLPKTLI--------SIDTSRSSVEDLVVGITQNKDWLCATLAQHG 979
            E  IPE+K +  G + PK +I        + D+    +  ++  I + KDW+   L + G
Sbjct: 8    EGKIPEQKQIENGRLFPKVVIPAAAGQYHNSDSQNEEMATVLEFIRKEKDWIQHELHESG 67

Query: 978  AVLFRGF-NVESGGDFRRVVEAFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHE 802
            A+LFRGF ++ +  DF   V+AFGW+E  Y G APR  V  RV+TANEAPL   I FHHE
Sbjct: 68   ALLFRGFKSMRTASDFNAFVDAFGWEEHTYQGAAPRNNVVGRVWTANEAPLDQDIFFHHE 127

Query: 801  MSLMKNQPSKIFFCCTIPSSEGGETSIARSWVLLREMEKRLPEFMEKLEGVGFVAELVFP 622
            M+L+K+ PSK+FF C I   EGG+T+I RS  +  EME + P  ++KLE  G +     P
Sbjct: 128  MALVKDFPSKLFFFCEIAPPEGGQTAIVRSDRVACEMESKFPSLVQKLEREGILTCTPLP 187

Query: 621  KEDTDQLVVGNTLASVLGTNDLXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTLQ 442
            KE+     +G +  S L TND              S +  ME+GS  +  GPL   RT +
Sbjct: 188  KEENRDYFLGKSWQSHLQTND--PEEAQRRVEAGGSKLVWMEDGSANIIAGPLPATRTFE 245

Query: 441  G---KRLWTYNIRGYGQKPQ-------LGDGSPIPPQVSETYMKILNEIGVDIRWHKGDV 292
            G   +++W   I     K          GDGS IP  + E   +++N   V+++W  GDV
Sbjct: 246  GYSDRKVWFNYIPAAVYKKAENYNILLCGDGSAIPKDIIEESARVMNNECVEVKWEAGDV 305

Query: 291  LLVDNLSTMHARRPGKPPRQILVSICK 211
            LL+DNL+ MHARRP KPPR++LVS+CK
Sbjct: 306  LLIDNLAVMHARRPSKPPRRVLVSMCK 332


>ref|XP_002336074.1| predicted protein [Populus trichocarpa]
            gi|224146078|ref|XP_002336285.1| predicted protein
            [Populus trichocarpa] gi|222833741|gb|EEE72218.1|
            predicted protein [Populus trichocarpa]
            gi|222869972|gb|EEF07103.1| predicted protein [Populus
            trichocarpa]
          Length = 321

 Score =  211 bits (536), Expect = 4e-52
 Identities = 111/308 (36%), Positives = 164/308 (53%), Gaps = 7/308 (2%)
 Frame = -3

Query: 1113 EKVFAGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDF 934
            +KV  G  +P  L   + ++S  E L+  + QNKDW    L ++ AVL RGF+V++  DF
Sbjct: 16   QKVVDGETMPLVLQPPEPNKSDTESLISALKQNKDWFEQMLIKNSAVLLRGFDVKNAEDF 75

Query: 933  RRVVEAFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSKIFFCCT 754
              ++EAFGWD++ Y+G APR +V  R++TANE PL  FI +HHEM L+K  P K+ F C 
Sbjct: 76   NDIIEAFGWDDIRYIGPAPRTQVYKRIWTANEGPLSEFIYYHHEMVLIKESPKKVMFFCE 135

Query: 753  IPSSEGGETSIARSWVLLREMEKRLPEFMEKLEGVGFVAELVFPKEDTDQLVVGNTLASV 574
            IP  EGG+T    S+ +   M +  PE +E++E  G       P +D    + G      
Sbjct: 136  IPPPEGGQTPFVPSFRVTERMLEEFPEAVEEVEAKGLKYTFTAPSKDDTSSMRGRGWEHA 195

Query: 573  LGTNDLXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTL---QGKRLWTYNIRGYG 403
             GT+D                +E + NG  K   GP    +     +G+R+W   + G  
Sbjct: 196  FGTSDKAEAERRAKAIG--MDMEWLPNGGVKTIMGPPSLTKVFDGRKGRRMWFNTVVGMH 253

Query: 402  QK----PQLGDGSPIPPQVSETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPR 235
             K      L DG+ IP    +   +I+ E  +  +W KGDVL +DN++ +H RRP  PPR
Sbjct: 254  GKESSSAMLADGTEIPENFVKRCGQIIEEESIQFKWEKGDVLFLDNMALLHGRRPSLPPR 313

Query: 234  QILVSICK 211
            ++LV+ICK
Sbjct: 314  KVLVAICK 321


>gb|ACN40106.1| unknown [Picea sitchensis]
          Length = 235

 Score =  205 bits (521), Expect = 2e-50
 Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 8/235 (3%)
 Frame = -3

Query: 891 VGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSKIFFCCTIPSSEGGETSIARS 712
           +G   R KV+ RVYT NEAPLH  IDFHHEMSLMK  PSK+FF C     EGG+T+IA S
Sbjct: 1   MGFPYRTKVEDRVYTTNEAPLHEQIDFHHEMSLMKVWPSKLFFFCETAPPEGGQTAIALS 60

Query: 711 WVLLREMEKRLPEFMEKLEGVGFVAELVFPKEDTDQLVVGNTLASVLGTNDLXXXXXXXX 532
             +++ ME R+PEF+ +L+ VG V ++  P E +    +     S L T D         
Sbjct: 61  RRIVQRMEYRMPEFVTRLKDVGLVFKITTPTEISRTSFIAKNWQSALETKDPREAKKRAV 120

Query: 531 XXXACSSIELMENGSTKVTFGPLEPIRTLQ---GKRLWTYNIRGYG-----QKPQLGDGS 376
               CSS E  E+GS +  FGP+E IR  +   G+++W  NI GYG     Q   LGDG 
Sbjct: 121 EMMGCSSFECYEDGSAEFVFGPMEAIRAFEGYGGRQVWFNNIVGYGGKNRNQSLSLGDGC 180

Query: 375 PIPPQVSETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK 211
            IP +  + +  ILNE  VD++W +GDVLL+DN++  HARRP KPPR+IL+++CK
Sbjct: 181 GIPGEALDAFKAILNEECVDLKWEEGDVLLLDNMAVQHARRPSKPPRRILIAMCK 235


>gb|ABR17432.1| unknown [Picea sitchensis]
          Length = 319

 Score =  205 bits (521), Expect = 2e-50
 Identities = 114/300 (38%), Positives = 162/300 (54%), Gaps = 4/300 (1%)
 Frame = -3

Query: 1098 GAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDFRRVVE 919
            G++ P  L+  D +  S+   +  I  N+DW+   L + G +LFRGF + S  DF   VE
Sbjct: 21   GSLFPMVLLPPDEN-PSIGSFLNAIHHNRDWIDNQLKRVGVLLFRGFPLRSASDFNAAVE 79

Query: 918  AFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSKIFFCCTIPSSE 739
            AFGW+E  Y+G+A R +++ RVYTANEAPL   I FHHEM++    P+K+ F C I   E
Sbjct: 80   AFGWEEHPYLGLASRTRIEGRVYTANEAPLDQPIKFHHEMAMFDEFPTKLIFFCEIAPPE 139

Query: 738  GGETSIARSWVLLREMEKRLPEFMEKLEGVGFVAELVFPKEDTDQLVVGNTLASVLGTND 559
            GG+T+I  S  + + ME+R PE ++KLE  G    +  P+ED  Q  +    +     N 
Sbjct: 140  GGQTAIVLSHKITQRMEQRYPELVKKLEKEGVTYPVSVPQEDDPQSFIKGWQSRYETDNK 199

Query: 558  LXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTLQG---KRLWTYNIRGYGQ-KPQ 391
                          S I   ++G      GP+  IRT+ G   KR   +N    G+  P 
Sbjct: 200  QEAERRLANSGFPVSKITWADDGRMSFEMGPIVSIRTVDGDADKRKAWFNPSALGKTTPM 259

Query: 390  LGDGSPIPPQVSETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK 211
            LGDG   P    E++++I+ E  VDI W  GDVL++DN    HARRP  PPR++L + CK
Sbjct: 260  LGDGPLFPEDAIESFIQIIEEECVDITWEVGDVLVLDNRFVQHARRPSTPPRRVLAAFCK 319


>gb|ABK26347.1| unknown [Picea sitchensis]
          Length = 319

 Score =  203 bits (517), Expect = 7e-50
 Identities = 113/300 (37%), Positives = 160/300 (53%), Gaps = 4/300 (1%)
 Frame = -3

Query: 1098 GAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDFRRVVE 919
            G++ P  L+  D +  S+   +  I  N+DW+   L + GA+LFRGF + S  DF   VE
Sbjct: 21   GSLFPLVLLPPDEN-PSIGSFLNAIHHNRDWIDNQLKRVGALLFRGFPLRSASDFNAAVE 79

Query: 918  AFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSKIFFCCTIPSSE 739
            AFGW+E  Y+G+A R +++ RVYTANEAPL   I FHHEMS+    P+K+ F C I   E
Sbjct: 80   AFGWEEHPYLGLASRTRIEGRVYTANEAPLDQPIKFHHEMSMFDEFPTKLIFFCEIAPPE 139

Query: 738  GGETSIARSWVLLREMEKRLPEFMEKLEGVGFVAELVFPKEDTDQLVVGNTLASVLGTND 559
            GG+T+I  S  + + ME+R PE ++KLE  G +     P+ED  +  +    +     N 
Sbjct: 140  GGQTAIVLSHKITQRMEQRYPELVKKLEKEGLIYPGSIPQEDDPRSFLKGWQSRYETNNK 199

Query: 558  LXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTLQG----KRLWTYNIRGYGQKPQ 391
                          S I   ++G      GP+  IRT+ G    ++ W          P 
Sbjct: 200  QEAERKLEMSGVPVSKITWADDGRMLFEVGPIVSIRTVDGDTDKRKAWFNPSAARQTIPV 259

Query: 390  LGDGSPIPPQVSETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK 211
            LGDGS  P +  E Y++I  E  VD+ W  GDVL++DN    HARRP  PPR++L + CK
Sbjct: 260  LGDGSLFPEEAIEPYIRITEEECVDVTWEVGDVLVLDNRFVQHARRPSTPPRRLLAAFCK 319


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