BLASTX nr result

ID: Coptis24_contig00010925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010925
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39671.3| unnamed protein product [Vitis vinifera]              221   4e-56
ref|XP_003633617.1| PREDICTED: G patch domain-containing protein...   221   6e-56
ref|XP_003554597.1| PREDICTED: G patch domain-containing protein...   216   2e-54
ref|XP_003521644.1| PREDICTED: G patch domain-containing protein...   213   1e-53
ref|XP_002512582.1| nucleic acid binding protein, putative [Rici...   206   1e-51

>emb|CBI39671.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  221 bits (564), Expect = 4e-56
 Identities = 107/141 (75%), Positives = 125/141 (88%), Gaps = 5/141 (3%)
 Frame = +1

Query: 7   MEHKWNCMRQETTAQDEVPGKMEEEY-----DDLGDDFRLPISHKPTENLDLDNVEQATL 171
           M+ +W   RQET+++D    + EE Y     +DL +DFRLPI+HKPTEN+DLDNVEQA+L
Sbjct: 1   MDRRWYSGRQETSSRDNRQREREEAYKDSLVEDLAEDFRLPINHKPTENVDLDNVEQASL 60

Query: 172 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQGMVEPIKAGIRDPKLGIGKQEEDDFYTAEEN 351
           DTQLTSSNIGFRLLQKMGWKGKGLGKDEQG++EPIK+GIRDP+LG+GKQEEDDF+TAEEN
Sbjct: 61  DTQLTSSNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEEN 120

Query: 352 IQRKKLDVELEETEEYAKKRE 414
           IQRKKLDVELEETEE+AKKRE
Sbjct: 121 IQRKKLDVELEETEEHAKKRE 141


>ref|XP_003633617.1| PREDICTED: G patch domain-containing protein 8-like [Vitis
           vinifera]
          Length = 296

 Score =  221 bits (562), Expect = 6e-56
 Identities = 106/138 (76%), Positives = 125/138 (90%), Gaps = 2/138 (1%)
 Frame = +1

Query: 7   MEHKWNCMRQETTAQDEVPGKMEEE--YDDLGDDFRLPISHKPTENLDLDNVEQATLDTQ 180
           M+ +W   RQET+++D    + EE+   +DL +DFRLPI+HKPTEN+DLDNVEQA+LDTQ
Sbjct: 1   MDRRWYSGRQETSSRDNRQREREEDSLVEDLAEDFRLPINHKPTENVDLDNVEQASLDTQ 60

Query: 181 LTSSNIGFRLLQKMGWKGKGLGKDEQGMVEPIKAGIRDPKLGIGKQEEDDFYTAEENIQR 360
           LTSSNIGFRLLQKMGWKGKGLGKDEQG++EPIK+GIRDP+LG+GKQEEDDF+TAEENIQR
Sbjct: 61  LTSSNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQR 120

Query: 361 KKLDVELEETEEYAKKRE 414
           KKLDVELEETEE+AKKRE
Sbjct: 121 KKLDVELEETEEHAKKRE 138


>ref|XP_003554597.1| PREDICTED: G patch domain-containing protein 8-like [Glycine max]
          Length = 304

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/141 (73%), Positives = 122/141 (86%), Gaps = 5/141 (3%)
 Frame = +1

Query: 7   MEHKWNCMRQETTAQDEVPGKMEEEY-----DDLGDDFRLPISHKPTENLDLDNVEQATL 171
           ME++W   RQET  +D    K E+ Y     +DL +DF LPI+H+PTEN+DLDNVEQA+L
Sbjct: 1   MEYRWTNGRQETGGRDRRQSKREQAYQDSLIEDLSEDFSLPINHRPTENVDLDNVEQASL 60

Query: 172 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQGMVEPIKAGIRDPKLGIGKQEEDDFYTAEEN 351
           DTQ+TSSNIGF+LLQKMGWKGKGLGKDEQG++EPIK+GIRDP+LG+GKQEEDDF+TAEEN
Sbjct: 61  DTQITSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEEN 120

Query: 352 IQRKKLDVELEETEEYAKKRE 414
           IQRKKLDVELEETEE+ KKRE
Sbjct: 121 IQRKKLDVELEETEEHVKKRE 141


>ref|XP_003521644.1| PREDICTED: G patch domain-containing protein 8-like [Glycine max]
          Length = 304

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/141 (73%), Positives = 121/141 (85%), Gaps = 5/141 (3%)
 Frame = +1

Query: 7   MEHKWNCMRQETTAQDEVPGKMEEEY-----DDLGDDFRLPISHKPTENLDLDNVEQATL 171
           ME++    RQET  +D    K E+ Y     +DL  DFRLPI+H+PTEN+DLDNVEQA+L
Sbjct: 1   MEYRRTSGRQETGGRDRRQSKREQAYQDSLIEDLSQDFRLPINHRPTENVDLDNVEQASL 60

Query: 172 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQGMVEPIKAGIRDPKLGIGKQEEDDFYTAEEN 351
           DTQ+TSSNIGF+LLQKMGWKGKGLGKDEQG++EPIK+GIRDP+LGIGKQEEDDF+TAEEN
Sbjct: 61  DTQITSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGIGKQEEDDFFTAEEN 120

Query: 352 IQRKKLDVELEETEEYAKKRE 414
           IQRKKLDVELEETEE+ KKRE
Sbjct: 121 IQRKKLDVELEETEEHVKKRE 141


>ref|XP_002512582.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548543|gb|EEF50034.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score =  206 bits (525), Expect = 1e-51
 Identities = 98/138 (71%), Positives = 121/138 (87%), Gaps = 2/138 (1%)
 Frame = +1

Query: 7   MEHKWNCMRQETTAQDEVPGKMEEE--YDDLGDDFRLPISHKPTENLDLDNVEQATLDTQ 180
           M+ +W   +QET + DE      ++   +DL +DFRLPI+H+PTEN+DL+NVEQA+LDT+
Sbjct: 1   MDCRWYGSKQETVSHDESQQDRNQDSLIEDLAEDFRLPINHRPTENVDLENVEQASLDTK 60

Query: 181 LTSSNIGFRLLQKMGWKGKGLGKDEQGMVEPIKAGIRDPKLGIGKQEEDDFYTAEENIQR 360
           LT++NIGFRLLQKMGWKGKGLGKDEQG++EPIK+GIRD KLGIGKQEEDDF+TAEENIQR
Sbjct: 61  LTATNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDRKLGIGKQEEDDFFTAEENIQR 120

Query: 361 KKLDVELEETEEYAKKRE 414
           KKLD+E+EETEE+AKKRE
Sbjct: 121 KKLDIEIEETEEHAKKRE 138


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