BLASTX nr result

ID: Coptis24_contig00010915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010915
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172849.1| PREDICTED: putative transcription elongation...    89   2e-15
ref|XP_004150377.1| PREDICTED: uncharacterized protein LOC101208...    89   2e-15
ref|XP_003614990.1| hypothetical protein MTR_5g062110 [Medicago ...    88   3e-15
ref|XP_003535734.1| PREDICTED: putative transcription elongation...    86   1e-14
ref|XP_003555224.1| PREDICTED: uncharacterized protein LOC100818...    85   2e-14

>ref|XP_004172849.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 620

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 42/88 (47%), Positives = 64/88 (72%)
 Frame = -1

Query: 829 INSSPNSQSYQL*GSRLKRDRQTGQICQTIDGLKCKDGYMYKKVSIESVGYVDVVPSTDE 650
           INSS  ++   L   + +RDR+TG++ + +DG+  KDGY+YKK+S++S+    V+PS DE
Sbjct: 236 INSSELAEFRPL--MQFRRDRETGKLFEFLDGMMLKDGYLYKKISLDSLSCWGVMPSEDE 293

Query: 649 LLKFKPYKKDASDGAEWLSHIYGEQRKK 566
           LLKFKP + + S+  EWLS +YGE++KK
Sbjct: 294 LLKFKPSESNESNDLEWLSQLYGEKKKK 321


>ref|XP_004150377.1| PREDICTED: uncharacterized protein LOC101208989 [Cucumis sativus]
          Length = 1690

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 42/88 (47%), Positives = 64/88 (72%)
 Frame = -1

Query: 829 INSSPNSQSYQL*GSRLKRDRQTGQICQTIDGLKCKDGYMYKKVSIESVGYVDVVPSTDE 650
           INSS  ++   L   + +RDR+TG++ + +DG+  KDGY+YKK+S++S+    V+PS DE
Sbjct: 296 INSSELAEFRPL--MQFRRDRETGKLFEFLDGMMLKDGYLYKKISLDSLSCWGVMPSEDE 353

Query: 649 LLKFKPYKKDASDGAEWLSHIYGEQRKK 566
           LLKFKP + + S+  EWLS +YGE++KK
Sbjct: 354 LLKFKPSESNESNDLEWLSQLYGEKKKK 381


>ref|XP_003614990.1| hypothetical protein MTR_5g062110 [Medicago truncatula]
           gi|355516325|gb|AES97948.1| hypothetical protein
           MTR_5g062110 [Medicago truncatula]
          Length = 325

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 37/73 (50%), Positives = 56/73 (76%)
 Frame = -1

Query: 784 RLKRDRQTGQICQTIDGLKCKDGYMYKKVSIESVGYVDVVPSTDELLKFKPYKKDASDGA 605
           ++K DR+TG++   +DG+  KDG++YKKVS++S+ + DVVP+ +ELLKF P K   S+  
Sbjct: 28  QIKHDRETGKVFHVLDGMLLKDGFLYKKVSLDSLNFWDVVPTEEELLKFGPSKNSESNDM 87

Query: 604 EWLSHIYGEQRKK 566
           EWLS+IYG+ +KK
Sbjct: 88  EWLSNIYGDSKKK 100


>ref|XP_003535734.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           2-like [Glycine max]
          Length = 712

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 37/73 (50%), Positives = 56/73 (76%)
 Frame = -1

Query: 784 RLKRDRQTGQICQTIDGLKCKDGYMYKKVSIESVGYVDVVPSTDELLKFKPYKKDASDGA 605
           ++KRDR TG++ + +DGL  KDGY+YKKVS++S+    VVP+ +ELLKF P + + S+  
Sbjct: 317 QIKRDRDTGKVFEVLDGLMLKDGYVYKKVSLDSLSLWGVVPTEEELLKFGPCENNESNDL 376

Query: 604 EWLSHIYGEQRKK 566
           EWLS +YG+++KK
Sbjct: 377 EWLSQLYGDKKKK 389


>ref|XP_003555224.1| PREDICTED: uncharacterized protein LOC100818587 [Glycine max]
          Length = 1495

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 37/73 (50%), Positives = 55/73 (75%)
 Frame = -1

Query: 784 RLKRDRQTGQICQTIDGLKCKDGYMYKKVSIESVGYVDVVPSTDELLKFKPYKKDASDGA 605
           ++KRDR TG++ + +DGL  KDGY+YKK+S +S+    VVP+ DELLKF P + + S+  
Sbjct: 318 QIKRDRDTGKVFEVLDGLMLKDGYVYKKISPDSLSLWGVVPTEDELLKFGPSENNESNDL 377

Query: 604 EWLSHIYGEQRKK 566
           EWLS +YG+++KK
Sbjct: 378 EWLSQLYGDKKKK 390


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