BLASTX nr result

ID: Coptis24_contig00010914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010914
         (2493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vini...   196   3e-47
ref|XP_003617645.1| Vacuolar protein sorting-associated protein ...   170   1e-39
ref|XP_002436943.1| hypothetical protein SORBIDRAFT_10g011810 [S...   167   1e-38
ref|XP_003545111.1| PREDICTED: uncharacterized protein LOC100783...   167   2e-38
ref|XP_003563913.1| PREDICTED: uncharacterized protein LOC100841...   166   2e-38

>ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vinifera]
          Length = 514

 Score =  196 bits (498), Expect = 3e-47
 Identities = 130/350 (37%), Positives = 186/350 (53%), Gaps = 23/350 (6%)
 Frame = -2

Query: 1820 MDNYMFNGSLDMAER--IGIDGMFLHMYSGPIVQPDSHDVNSRNQPMSGIPFLSTFHGEP 1647
            M+N MFN  +D+A R  + +DG+  HM +  ++Q D   +NS+NQ M G+P L    GE 
Sbjct: 1    MENDMFNVPMDIAGRNHVVMDGVSSHMSTNSLIQSDLFHLNSQNQFMIGLPVLPMLQGET 60

Query: 1646 TN----DLEIENVDGVVDAEISFSRNRPLSRQGVGEASASSSTSIGNCNFQEHYTRGASL 1479
             N    D ++ +   +VD++   SRN          +S   +  IG+ N QE +    ++
Sbjct: 61   INGLHADFQMTSRPAIVDSDELVSRN----------SSLGQACPIGSTNGQEQFNEVTTI 110

Query: 1478 SATAIAHLLAANTDLQGNFSGVNLSTASGF---------------ASTSSVEPPVNCGY- 1347
            SA+++A LLA  + L  N   + +S  S F                S SS+   V+C Y 
Sbjct: 111  SASSLATLLATKSGLHENLDNLAISATSVFPSEDLRTFVSSDCSNTSNSSLATSVDCPYD 170

Query: 1346 GLPSEMEILGSKKDGKWGFDGFLGPQELTGSPPIRTVCPPFHFIGSSSQHELTASNKSPS 1167
            G+ S+M         KWGFD FL   ELTG   +RT   PFH IG    +   +S+    
Sbjct: 171  GVLSDMT-------RKWGFDKFLPSPELTGKTTLRTGFQPFHIIGDMDPNGWISSSADTR 223

Query: 1166 INHTYGYYIPNSELSLSLATYQPSGNV-PTIPDQSSEMSCSVVTDHSLREAGFGSERSSD 990
                YG    ++ELSLSLAT QPS     T P+Q SE SCS VT   L E G GSE+ S 
Sbjct: 224  TVPPYG---SSNELSLSLATSQPSVMCGATAPNQCSERSCSGVTHPCLNEVGLGSEQGSC 280

Query: 989  NRNSLSMNFSHFRPVHFSHLPSGSKYLHVVQQILAEVASYSIRNIDYLVF 840
            N   LS++F  +RP  FS + SGS+YLHV+Q+ILAE+ +YS+ N+D+ ++
Sbjct: 281  NSKELSLSFGSYRPAQFSQVISGSRYLHVIQEILAEILNYSLENLDHSIY 330


>ref|XP_003617645.1| Vacuolar protein sorting-associated protein VTA1-like protein
           [Medicago truncatula] gi|355518980|gb|AET00604.1|
           Vacuolar protein sorting-associated protein VTA1-like
           protein [Medicago truncatula]
          Length = 487

 Score =  170 bits (431), Expect = 1e-39
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -2

Query: 704 EKDKKSLKLGPEDNLYVEGFASNVFAKADKQDRAGRADLNTAKAFYAASIFFEILNQFGE 525
           EKDKK LKLGPEDNLY+EGFA NVF KADKQDRAGRAD+NTAK FYAASIFFEILNQFGE
Sbjct: 63  EKDKKGLKLGPEDNLYLEGFALNVFGKADKQDRAGRADVNTAKTFYAASIFFEILNQFGE 122

Query: 524 LQPDLEQKQKYAVWKAAEIRKALKEGRKPV 435
           LQPDLEQKQKYAVWKAA+IRKALKEGRKPV
Sbjct: 123 LQPDLEQKQKYAVWKAADIRKALKEGRKPV 152


>ref|XP_002436943.1| hypothetical protein SORBIDRAFT_10g011810 [Sorghum bicolor]
           gi|241915166|gb|EER88310.1| hypothetical protein
           SORBIDRAFT_10g011810 [Sorghum bicolor]
          Length = 474

 Score =  167 bits (423), Expect = 1e-38
 Identities = 82/96 (85%), Positives = 88/96 (91%)
 Frame = -2

Query: 725 IVLRGGAEKDKKSLKLGPEDNLYVEGFASNVFAKADKQDRAGRADLNTAKAFYAASIFFE 546
           I L    EKDKKSL LGP+DNL++EGFA NVFAKADKQDRAGRAD+NTAK FYAASIFFE
Sbjct: 57  ISLMNQLEKDKKSLTLGPDDNLHLEGFALNVFAKADKQDRAGRADINTAKTFYAASIFFE 116

Query: 545 ILNQFGELQPDLEQKQKYAVWKAAEIRKALKEGRKP 438
           ILNQFGELQPD+EQKQKYA+WKAAEIRKALKEGRKP
Sbjct: 117 ILNQFGELQPDVEQKQKYAIWKAAEIRKALKEGRKP 152


>ref|XP_003545111.1| PREDICTED: uncharacterized protein LOC100783739 [Glycine max]
          Length = 487

 Score =  167 bits (422), Expect = 2e-38
 Identities = 81/89 (91%), Positives = 85/89 (95%)
 Frame = -2

Query: 704 EKDKKSLKLGPEDNLYVEGFASNVFAKADKQDRAGRADLNTAKAFYAASIFFEILNQFGE 525
           EKDKKS++LGPEDNLY+EGFA NVF KADKQDRAGRADLNTAK FYAASIFFEILNQFG 
Sbjct: 64  EKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGA 123

Query: 524 LQPDLEQKQKYAVWKAAEIRKALKEGRKP 438
           +QPDLEQKQKYAVWKAAEIRKALKEGRKP
Sbjct: 124 VQPDLEQKQKYAVWKAAEIRKALKEGRKP 152


>ref|XP_003563913.1| PREDICTED: uncharacterized protein LOC100841818 isoform 2
           [Brachypodium distachyon]
          Length = 469

 Score =  166 bits (421), Expect = 2e-38
 Identities = 81/96 (84%), Positives = 89/96 (92%)
 Frame = -2

Query: 725 IVLRGGAEKDKKSLKLGPEDNLYVEGFASNVFAKADKQDRAGRADLNTAKAFYAASIFFE 546
           + L    EKDKKSL LGP+D+L++EGFAS+VFAKADKQDRAGRAD+NTAK FYAASIFFE
Sbjct: 57  VSLMNQLEKDKKSLTLGPDDHLHLEGFASSVFAKADKQDRAGRADINTAKTFYAASIFFE 116

Query: 545 ILNQFGELQPDLEQKQKYAVWKAAEIRKALKEGRKP 438
           ILNQFGELQPDLEQKQKYA+WKAAEIRKALKEGRKP
Sbjct: 117 ILNQFGELQPDLEQKQKYAIWKAAEIRKALKEGRKP 152


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