BLASTX nr result

ID: Coptis24_contig00010909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010909
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]      175   3e-42
ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...   174   7e-42
ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis...   174   7e-42
ref|XP_003617096.1| Protein argonaute 4 [Medicago truncatula] gi...   171   4e-41
ref|XP_003617095.1| Protein argonaute 4 [Medicago truncatula] gi...   171   4e-41

>gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]
          Length = 933

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/104 (80%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   INVGKPKRPTYIPLELCNLVSLQRYTKALSTLQRSSLVEKSRQKPQERMSVLSDALKTNK 182
           INVGKPKRPTY PLELC+LVSLQRYTKALST QR+SLVEKSRQKPQERM VLSDALKT+ 
Sbjct: 396 INVGKPKRPTYFPLELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLSDALKTSN 455

Query: 183 YDSDKMLQACGVSINSKFTQIDGRVLSAPKLKVGNGEDFMPRNG 314
           YD+++ML++ G+SI+S FTQ++GRVL APKLKVGNGEDF PRNG
Sbjct: 456 YDAERMLRSSGISISSNFTQVEGRVLQAPKLKVGNGEDFFPRNG 499


>ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 4-like [Cucumis
           sativus]
          Length = 915

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/104 (78%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   INVGKPKRPTYIPLELCNLVSLQRYTKALSTLQRSSLVEKSRQKPQERMSVLSDALKTNK 182
           INVGKPKRPT+IP+ELC+LVSLQRYTKALST QR+SLVEKSRQKPQERM VLSD+L+ NK
Sbjct: 379 INVGKPKRPTFIPVELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLSDSLRRNK 438

Query: 183 YDSDKMLQACGVSINSKFTQIDGRVLSAPKLKVGNGEDFMPRNG 314
           YD++ ML++CG++INS F Q++GRVL APKLKVGNGEDF PRNG
Sbjct: 439 YDAEPMLRSCGIAINSSFIQVEGRVLPAPKLKVGNGEDFFPRNG 482


>ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis sativus]
          Length = 915

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/104 (78%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   INVGKPKRPTYIPLELCNLVSLQRYTKALSTLQRSSLVEKSRQKPQERMSVLSDALKTNK 182
           INVGKPKRPT+IP+ELC+LVSLQRYTKALST QR+SLVEKSRQKPQERM VLSD+L+ NK
Sbjct: 379 INVGKPKRPTFIPVELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLSDSLRRNK 438

Query: 183 YDSDKMLQACGVSINSKFTQIDGRVLSAPKLKVGNGEDFMPRNG 314
           YD++ ML++CG++INS F Q++GRVL APKLKVGNGEDF PRNG
Sbjct: 439 YDAEPMLRSCGIAINSSFIQVEGRVLPAPKLKVGNGEDFFPRNG 482


>ref|XP_003617096.1| Protein argonaute 4 [Medicago truncatula]
           gi|355518431|gb|AET00055.1| Protein argonaute 4
           [Medicago truncatula]
          Length = 926

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/104 (79%), Positives = 94/104 (90%)
 Frame = +3

Query: 3   INVGKPKRPTYIPLELCNLVSLQRYTKALSTLQRSSLVEKSRQKPQERMSVLSDALKTNK 182
           INVGKPKRPT++P+ELC+LVSLQRYTKALSTLQRSSLVEKSRQKPQERM VL+DALKT+ 
Sbjct: 411 INVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALKTSD 470

Query: 183 YDSDKMLQACGVSINSKFTQIDGRVLSAPKLKVGNGEDFMPRNG 314
           Y S+ ML+ CG+SI S FTQ+DGRVL AP+LK GNGEDF PRNG
Sbjct: 471 YGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNG 514


>ref|XP_003617095.1| Protein argonaute 4 [Medicago truncatula]
           gi|355518430|gb|AET00054.1| Protein argonaute 4
           [Medicago truncatula]
          Length = 948

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/104 (79%), Positives = 94/104 (90%)
 Frame = +3

Query: 3   INVGKPKRPTYIPLELCNLVSLQRYTKALSTLQRSSLVEKSRQKPQERMSVLSDALKTNK 182
           INVGKPKRPT++P+ELC+LVSLQRYTKALSTLQRSSLVEKSRQKPQERM VL+DALKT+ 
Sbjct: 411 INVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALKTSD 470

Query: 183 YDSDKMLQACGVSINSKFTQIDGRVLSAPKLKVGNGEDFMPRNG 314
           Y S+ ML+ CG+SI S FTQ+DGRVL AP+LK GNGEDF PRNG
Sbjct: 471 YGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNG 514


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