BLASTX nr result

ID: Coptis24_contig00010905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010905
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281865.1| PREDICTED: uncharacterized protein LOC100258...   136   2e-30
ref|XP_002519518.1| hypothetical protein RCOM_1355450 [Ricinus c...   135   5e-30
ref|XP_002322887.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002326188.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
emb|CBI32751.3| unnamed protein product [Vitis vinifera]              122   4e-26

>ref|XP_002281865.1| PREDICTED: uncharacterized protein LOC100258485 [Vitis vinifera]
          Length = 426

 Score =  136 bits (342), Expect = 2e-30
 Identities = 89/197 (45%), Positives = 109/197 (55%), Gaps = 35/197 (17%)
 Frame = +1

Query: 1   ENDDRQLLGIGKKFAVNASTVNLSNFG-KLGFYG----------------FQFEVEEL-- 123
           E DDR L G G++  +N S ++LS F  KLGF G                F F+ E L  
Sbjct: 116 EYDDRTLFGGGRRTQINGSFLSLSRFDPKLGFSGSVEDNGIRASEIVRSGFSFKGEGLLF 175

Query: 124 ---NDVVESVEGNEDRVSE-------------GVELGRRDAAMLVFLVSFLSAVYGWVIL 255
              ND  +  EGN+  V E             G++LG RD+A L FLV FLSA YGWVIL
Sbjct: 176 TDGNDD-DGDEGNQTVVLENKEERGDFPFFIKGMDLGSRDSAALFFLVCFLSAAYGWVIL 234

Query: 256 GFVIVNTCXXXXXXXXXXXXXYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIRDAMT 435
           GF++  +                 R   SF+GTVW G RLG RRLSGFILMRWA+RD MT
Sbjct: 235 GFLVTYSWVLGIVFISVVNDHL--RRTTSFIGTVWDGSRLGLRRLSGFILMRWAVRDGMT 292

Query: 436 QIIGVCFFGEIEDQHSF 486
           Q++G+ FFGEIEDQ+SF
Sbjct: 293 QLLGLWFFGEIEDQYSF 309


>ref|XP_002519518.1| hypothetical protein RCOM_1355450 [Ricinus communis]
           gi|223541381|gb|EEF42932.1| hypothetical protein
           RCOM_1355450 [Ricinus communis]
          Length = 465

 Score =  135 bits (339), Expect = 5e-30
 Identities = 87/201 (43%), Positives = 117/201 (58%), Gaps = 39/201 (19%)
 Frame = +1

Query: 1   ENDDRQLLGIGKKFAVNASTVNLSNFG-KLGFY----------------GFQFEVEEL-- 123
           ++ DR +    +K + N S+V L NF  KLGF                 G Q ++E L  
Sbjct: 115 DDTDRSIFNPNRKLSPNGSSVILYNFDPKLGFSDLVTDGGLKIHGMVRSGVQLKIEGLPN 174

Query: 124 ----------NDVVE--SVEGNED--RVSE------GVELGRRDAAMLVFLVSFLSAVYG 243
                     N++ E  SVE +ED  R+ +      G+E+GRRDAA L FLVSFLSA YG
Sbjct: 175 NYSDDNESENNEIEEEESVEKDEDLDRIVDFEFFIKGLEIGRRDAAALFFLVSFLSAAYG 234

Query: 244 WVILGFVIVNTCXXXXXXXXXXXXXYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIR 423
           WVILGF ++ +               LG++ NSFVG +W G +LG +RL+GFILMRWA+R
Sbjct: 235 WVILGFTVIYS-WILGVVFVAVVYNLLGKF-NSFVGVIWDGSKLGLKRLTGFILMRWAVR 292

Query: 424 DAMTQIIGVCFFGEIEDQHSF 486
           DA+TQ+IG+ +FGEIEDQ+SF
Sbjct: 293 DALTQLIGLWYFGEIEDQYSF 313


>ref|XP_002322887.1| predicted protein [Populus trichocarpa] gi|222867517|gb|EEF04648.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  129 bits (325), Expect = 2e-28
 Identities = 84/192 (43%), Positives = 103/192 (53%), Gaps = 42/192 (21%)
 Frame = +1

Query: 37  KFAVNASTVNLSNFG-KLGFY----------------GFQFEV-EELNDVVESVEGNEDR 162
           KF  N S V L NF  K GF                 G QF+  EE++  V++   + D 
Sbjct: 120 KFPPNRSFVILHNFDPKFGFSDAVIDNGIKVPEIVRSGIQFKAAEEIHSYVDNTNHDNDE 179

Query: 163 VSE------------------------GVELGRRDAAMLVFLVSFLSAVYGWVILGFVIV 270
            SE                        G+ELGRRDA  L FLVSFLSA YGWVILGF  +
Sbjct: 180 DSERSREDFNSKENGEEKIVGLQFLVKGLELGRRDATALFFLVSFLSAAYGWVILGFTAI 239

Query: 271 NTCXXXXXXXXXXXXXYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIRDAMTQIIGV 450
            +               LGRY  SF+G VW G RLG++RL+GFILMRWA+RDA+TQ++G+
Sbjct: 240 YS-WVLGIVFVVVVNDLLGRY-GSFIGVVWDGSRLGSKRLAGFILMRWAVRDALTQLVGL 297

Query: 451 CFFGEIEDQHSF 486
            FFGEIEDQ+SF
Sbjct: 298 WFFGEIEDQYSF 309


>ref|XP_002326188.1| predicted protein [Populus trichocarpa] gi|222833381|gb|EEE71858.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/130 (53%), Positives = 88/130 (67%), Gaps = 6/130 (4%)
 Frame = +1

Query: 115 EELNDVVESVEGNEDRVSE------GVELGRRDAAMLVFLVSFLSAVYGWVILGFVIVNT 276
           E+ N+     EG ED++ +      G+ELGRRD A L FLVSFLSA YGWVILGF  + +
Sbjct: 189 EDFNNNESGKEG-EDKILDLQFLVKGLELGRRDTAALFFLVSFLSAAYGWVILGFTAIYS 247

Query: 277 CXXXXXXXXXXXXXYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIRDAMTQIIGVCF 456
                          LGRY  SF+G VW G RLG++RL+GFILMRWA+RDA+TQ++G+ F
Sbjct: 248 -WILGVVFIVVVNDLLGRY-GSFIGVVWNGSRLGSKRLAGFILMRWAVRDALTQLVGLWF 305

Query: 457 FGEIEDQHSF 486
           FGEIEDQ+SF
Sbjct: 306 FGEIEDQYSF 315


>emb|CBI32751.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/126 (51%), Positives = 82/126 (65%)
 Frame = +1

Query: 109 EVEELNDVVESVEGNEDRVSEGVELGRRDAAMLVFLVSFLSAVYGWVILGFVIVNTCXXX 288
           ++E L  + E   G+     +G++LG RD+A L FLV FLSA YGWVILGF++  +    
Sbjct: 4   KIERLGFISEE-RGDFPFFIKGMDLGSRDSAALFFLVCFLSAAYGWVILGFLVTYSWVLG 62

Query: 289 XXXXXXXXXXYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIRDAMTQIIGVCFFGEI 468
                        R   SF+GTVW G RLG RRLSGFILMRWA+RD MTQ++G+ FFGEI
Sbjct: 63  IVFISVVNDHL--RRTTSFIGTVWDGSRLGLRRLSGFILMRWAVRDGMTQLLGLWFFGEI 120

Query: 469 EDQHSF 486
           EDQ+SF
Sbjct: 121 EDQYSF 126


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