BLASTX nr result

ID: Coptis24_contig00010903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010903
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40749.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   109   3e-22
emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]   107   8e-22
ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-proly...   102   4e-20
ref|XP_002306991.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>emb|CBI40749.3| unnamed protein product [Vitis vinifera]
          Length = 222

 Score =  110 bits (274), Expect = 2e-22
 Identities = 66/139 (47%), Positives = 79/139 (56%)
 Frame = +1

Query: 1   QKQNQNQLVLPLPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSXXXXX 180
           Q Q    ++LP+PISRR A+LISVLP + IS    S ARERR ++ IPLEDY TS     
Sbjct: 25  QTQPPKHVILPMPISRRCAILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLK 84

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVEGKGRTAEKGSAVMVHFDCLYRNI 360
                                            D+V+G G  AEKGS+V VHFDC+YR+I
Sbjct: 85  YY-------------------------------DVVDGNGPVAEKGSSVQVHFDCIYRSI 113

Query: 361 DAVSSRESKLLAGNRSIAE 417
            AVSSRESKLLAGNR IA+
Sbjct: 114 TAVSSRESKLLAGNRIIAQ 132


>ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18,
           chloroplastic-like [Cucumis sativus]
           gi|449530267|ref|XP_004172117.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase FKBP18,
           chloroplastic-like [Cucumis sativus]
          Length = 227

 Score =  109 bits (272), Expect = 3e-22
 Identities = 67/139 (48%), Positives = 78/139 (56%)
 Frame = +1

Query: 1   QKQNQNQLVLPLPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSXXXXX 180
           Q++N +Q    LPISRR+A+LIS LP   +S   PS ARERR+++ IPLEDY TS     
Sbjct: 29  QRENASQQEFSLPISRRSAILISSLPFTLVS-VSPSKARERRNKKTIPLEDYLTSPNGLK 87

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVEGKGRTAEKGSAVMVHFDCLYRNI 360
                                            D+ EGKG  AEKGS V VHFDCLYR I
Sbjct: 88  YY-------------------------------DVEEGKGPVAEKGSTVQVHFDCLYRGI 116

Query: 361 DAVSSRESKLLAGNRSIAE 417
            AVSSRESKLLAGNR IA+
Sbjct: 117 TAVSSRESKLLAGNRVIAQ 135


>emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]
          Length = 682

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/139 (46%), Positives = 78/139 (56%)
 Frame = +1

Query: 1   QKQNQNQLVLPLPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSXXXXX 180
           Q Q    ++LP+PI RR A+LISVLP + IS    S ARERR ++ IPLEDY TS     
Sbjct: 25  QTQPPKHVILPMPIXRRCAILISVLPFSLISQPHSSDARERRTKKNIPLEDYLTSPDGLK 84

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVEGKGRTAEKGSAVMVHFDCLYRNI 360
                                            D+V+G G  AEKGS+V VHFDC+YR+I
Sbjct: 85  YY-------------------------------DVVBGNGPVAEKGSSVQVHFDCIYRSI 113

Query: 361 DAVSSRESKLLAGNRSIAE 417
            AVSSRESK+LAGNR IA+
Sbjct: 114 TAVSSRESKJLAGNRIIAQ 132


>ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           1, chloroplastic [Vitis vinifera]
          Length = 187

 Score =  102 bits (253), Expect = 4e-20
 Identities = 62/128 (48%), Positives = 73/128 (57%)
 Frame = +1

Query: 34  LPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSXXXXXXXXXXXXXXXX 213
           +PISRR A+LISVLP + IS    S ARERR ++ IPLEDY TS                
Sbjct: 1   MPISRRCAILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLKYY--------- 51

Query: 214 XXXXXXXXXXXXXXXXXXXXXXDLVEGKGRTAEKGSAVMVHFDCLYRNIDAVSSRESKLL 393
                                 D+V+G G  AEKGS+V VHFDC+YR+I AVSSRESKLL
Sbjct: 52  ----------------------DVVDGNGPVAEKGSSVQVHFDCIYRSITAVSSRESKLL 89

Query: 394 AGNRSIAE 417
           AGNR IA+
Sbjct: 90  AGNRIIAQ 97


>ref|XP_002306991.1| predicted protein [Populus trichocarpa] gi|222856440|gb|EEE93987.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  102 bits (253), Expect = 4e-20
 Identities = 62/138 (44%), Positives = 73/138 (52%)
 Frame = +1

Query: 4   KQNQNQLVLPLPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSXXXXXX 183
           ++  N + L  P SRR A+LIS LP    S  Q S ARERR+++ IPLEDY TS      
Sbjct: 28  QEQSNHVFLSNPTSRRCAILISTLPFTLTSLPQLSEARERRNKKTIPLEDYLTSPDGLKY 87

Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVEGKGRTAEKGSAVMVHFDCLYRNID 363
                                           D++EGKG  AEKG  V VHFDCLYR I 
Sbjct: 88  Y-------------------------------DVLEGKGAAAEKGMTVQVHFDCLYRGIT 116

Query: 364 AVSSRESKLLAGNRSIAE 417
           A+SSRESKLLAGNR IA+
Sbjct: 117 AISSRESKLLAGNRIIAQ 134


Top