BLASTX nr result

ID: Coptis24_contig00010892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010892
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284845.1| PREDICTED: uncharacterized protein LOC100254...   341   3e-91
emb|CBI19503.3| unnamed protein product [Vitis vinifera]              335   2e-89
ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
ref|XP_002301174.1| predicted protein [Populus trichocarpa] gi|2...   323   6e-86
ref|XP_002510197.1| conserved hypothetical protein [Ricinus comm...   315   2e-83

>ref|XP_002284845.1| PREDICTED: uncharacterized protein LOC100254049 [Vitis vinifera]
          Length = 319

 Score =  341 bits (874), Expect = 3e-91
 Identities = 186/334 (55%), Positives = 213/334 (63%), Gaps = 2/334 (0%)
 Frame = +2

Query: 80   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 259
            MHAKTDSEVTSLA SSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 260  XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSRG-NRKGQKPWKECDVIXXXXXXXXXX 436
                                     KI PND SRG +RKG+KPWKEC VI          
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGHRKGEKPWKECAVIEEEGLLEDEE 120

Query: 437  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFXXXXXXXXXXXXX 616
            R  G PRRCYF A              IL+GAS+PQKPKI+MKSITF             
Sbjct: 121  RQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKITMKSITFERFVVQAGSDSTG 180

Query: 617  XXXXXXXXXXXXXXXXXXTDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATG 796
                              TDM+SMNS+VK TFRNTATFFG+HV  T +D+SYS+L VA+G
Sbjct: 181  VA----------------TDMVSMNSTVKLTFRNTATFFGVHVTSTPLDLSYSRLRVASG 224

Query: 797  TVQKFYQSRKSQRTVTAVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLG 976
            T++KFYQSRKS R++T V+ G+ IPLYG GA LSTS G    P+PLKL+FM+++R YVLG
Sbjct: 225  TIKKFYQSRKSHRSLTIVLMGDKIPLYGGGASLSTSTGTTTEPLPLKLSFMLRSRAYVLG 284

Query: 977  KLVKPKFHKAVECSVVLDPKTLNVPIPL-KNCTY 1075
            KLVKPKF+K +ECSV LDPK LNVP+ L K+CTY
Sbjct: 285  KLVKPKFYKRIECSVNLDPKKLNVPLSLKKSCTY 318


>emb|CBI19503.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  335 bits (858), Expect = 2e-89
 Identities = 185/334 (55%), Positives = 212/334 (63%), Gaps = 2/334 (0%)
 Frame = +2

Query: 80   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 259
            MHAKTDSEVTSLA SSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 260  XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSRG-NRKGQKPWKECDVIXXXXXXXXXX 436
                                      I PND SRG +RKG+KPWKEC VI          
Sbjct: 61   HS-----------------------SISPNDASRGGHRKGEKPWKECAVIEEEGLLEDEE 97

Query: 437  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFXXXXXXXXXXXXX 616
            R  G PRRCYF A              IL+GAS+PQKPKI+MKSITF             
Sbjct: 98   RQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKITMKSITFERFVVQAGSDSTG 157

Query: 617  XXXXXXXXXXXXXXXXXXTDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATG 796
                              TDM+SMNS+VK TFRNTATFFG+HV  T +D+SYS+L VA+G
Sbjct: 158  VA----------------TDMVSMNSTVKLTFRNTATFFGVHVTSTPLDLSYSRLRVASG 201

Query: 797  TVQKFYQSRKSQRTVTAVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLG 976
            T++KFYQSRKS R++T V+ G+ IPLYG GA LSTS G    P+PLKL+FM+++R YVLG
Sbjct: 202  TIKKFYQSRKSHRSLTIVLMGDKIPLYGGGASLSTSTGTTTEPLPLKLSFMLRSRAYVLG 261

Query: 977  KLVKPKFHKAVECSVVLDPKTLNVPIPL-KNCTY 1075
            KLVKPKF+K +ECSV LDPK LNVP+ L K+CTY
Sbjct: 262  KLVKPKFYKRIECSVNLDPKKLNVPLSLKKSCTY 295


>ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|222835472|gb|EEE73907.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score =  323 bits (829), Expect = 4e-86
 Identities = 173/333 (51%), Positives = 204/333 (61%), Gaps = 1/333 (0%)
 Frame = +2

Query: 80   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 259
            MHAKTDSEVTSLAPSSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 260  XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSRGNRKGQKPWKECDVIXXXXXXXXXXR 439
                                     KI PND SRG RKGQK WKECDVI          R
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGRKGQKQWKECDVIEEEGLLDDEER 120

Query: 440  HSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFXXXXXXXXXXXXXX 619
              G PR+CYF A              IL+GAS+ QKPKI+MKS+TF              
Sbjct: 121  RKGLPRKCYFLAFVLGFFILFSFFSLILWGASKQQKPKITMKSVTF-------------- 166

Query: 620  XXXXXXXXXXXXXXXXXTDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATGT 799
                             TDM+S+NS+V+ T+RN  TFFG+HV  T +D+SYS++ +A+G+
Sbjct: 167  --EQFRIQAGSDSTGVATDMISVNSTVRMTYRNKGTFFGVHVTSTPLDLSYSEITLASGS 224

Query: 800  VQKFYQSRKSQRTVTAVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLGK 979
            ++KFYQSRKSQR+V   +  + IPLYGSGA  S+S G    PVPLK+NF+V+++ YVLGK
Sbjct: 225  IKKFYQSRKSQRSVAISLISDKIPLYGSGAAFSSSTGTATLPVPLKVNFVVRSKAYVLGK 284

Query: 980  LVKPKFHKAVECSVVLDPKTLNVPIPL-KNCTY 1075
            LVKPKF+K +EC    DPK LNVPI L K CTY
Sbjct: 285  LVKPKFNKRIECDFTFDPKKLNVPISLQKACTY 317


>ref|XP_002301174.1| predicted protein [Populus trichocarpa] gi|222842900|gb|EEE80447.1|
            predicted protein [Populus trichocarpa]
          Length = 319

 Score =  323 bits (828), Expect = 6e-86
 Identities = 177/334 (52%), Positives = 203/334 (60%), Gaps = 2/334 (0%)
 Frame = +2

Query: 80   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 259
            MHAKTDSEVTSLAPSSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 260  XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSRGNR-KGQKPWKECDVIXXXXXXXXXX 436
                                     KI PND SRG + KGQK WKECDVI          
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQGKGQKQWKECDVIEEEGLLEDEE 120

Query: 437  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFXXXXXXXXXXXXX 616
            R  G PRRCYF A              IL+GAS+PQKPKI+MKSITF             
Sbjct: 121  RRKGLPRRCYFLAFVLGFFILFSLFSLILWGASKPQKPKITMKSITF------------- 167

Query: 617  XXXXXXXXXXXXXXXXXXTDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATG 796
                              TDM+S+NS+VK T+RN  TFFG+ V  T +D+SYS++ +A+G
Sbjct: 168  ---EQFRIQAGSDSTGVATDMISVNSTVKMTYRNKGTFFGVRVTSTPLDLSYSEITIASG 224

Query: 797  TVQKFYQSRKSQRTVTAVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLG 976
             ++KFYQSRKSQR V   +  N IPLYGSGAGLS+S G    PVPLK+NF+V++R YVLG
Sbjct: 225  NIKKFYQSRKSQRPVAIPVISNKIPLYGSGAGLSSSTGTTTLPVPLKMNFVVRSRAYVLG 284

Query: 977  KLVKPKFHKAVECSVVLDPKTLNVPIPLKN-CTY 1075
            KLVK KF++ +EC    DPK LNVPI LK  CTY
Sbjct: 285  KLVKTKFNRKIECDFTFDPKKLNVPISLKEACTY 318


>ref|XP_002510197.1| conserved hypothetical protein [Ricinus communis]
            gi|223550898|gb|EEF52384.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  315 bits (807), Expect = 2e-83
 Identities = 171/334 (51%), Positives = 203/334 (60%), Gaps = 2/334 (0%)
 Frame = +2

Query: 80   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 259
            MHAKTDSEVTSLAPSSPTRSPRR VY+VQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAPSSPTRSPRRPVYFVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 260  XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSRGN-RKGQKPWKECDVIXXXXXXXXXX 436
                                     KI PND S+ + RKGQK WK+C VI          
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASKSSHRKGQKQWKDCAVIEEEGLLEDEA 120

Query: 437  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFXXXXXXXXXXXXX 616
            R  G PRRCYF A              +L+GAS+PQKPKI+MK+I F             
Sbjct: 121  REKGLPRRCYFLAFLLGFFVLFSFFSLVLWGASKPQKPKITMKNIKFEHFSIQAGSDSTG 180

Query: 617  XXXXXXXXXXXXXXXXXXTDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATG 796
                              TDM+S+NS+VK  +RNT TFFG+HV  T +D+ YS++ +A+G
Sbjct: 181  VA----------------TDMISINSTVKMIYRNTGTFFGVHVTSTPVDLFYSEITIASG 224

Query: 797  TVQKFYQSRKSQRTVTAVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLG 976
             V+KFYQSRKSQR+V   +  N IPLYGSGAG S+S G    PVPLKL+F++++R YVLG
Sbjct: 225  AVKKFYQSRKSQRSVAISVMSNKIPLYGSGAGFSSSTGTTALPVPLKLSFVLRSRAYVLG 284

Query: 977  KLVKPKFHKAVECSVVLDPKTLNVPIPL-KNCTY 1075
            KLVKPKF+K +EC    DPK LNVPI L K+CTY
Sbjct: 285  KLVKPKFYKRIECDFTFDPKKLNVPISLKKSCTY 318


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