BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010872
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149098.1| PREDICTED: RING-H2 finger protein ATL56-like...    99   2e-18
dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana]                       89   1e-15
gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis th...    89   1e-15
ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thali...    89   1e-15
ref|XP_002884149.1| hypothetical protein ARALYDRAFT_900256 [Arab...    88   2e-15

>ref|XP_004149098.1| PREDICTED: RING-H2 finger protein ATL56-like [Cucumis sativus]
           gi|449507961|ref|XP_004163179.1| PREDICTED: RING-H2
           finger protein ATL56-like [Cucumis sativus]
          Length = 178

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
 Frame = +1

Query: 220 KLKPKFLSFFLQSIIMLCIITLFFLFLGIAT-VFIIHICIAGXXXXXXXXXXXXXXXFPF 396
           K + + LS  L+  IM+ + TLFF+FLG+AT + +IH+C+A                  F
Sbjct: 22  KPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASALHRRRR----------F 71

Query: 397 DYIDAEFNHSSSSGISEHDINKLTSYGYISVVKLLNCGATQEDCCAVCLDGFRENERFRI 576
               ++++  SSSG S  D+ KL  + + + V       +Q DC ++CLDGFR+ +  R 
Sbjct: 72  HSRHSQYS-DSSSGFSHRDLKKLLQFRFSNWVN----PHSQIDC-SICLDGFRKGQWCRR 125

Query: 577 LPGCKHVFHVGCIDVWLMKVSACPTCRGVVELN 675
           L GC HV+H  CID WL++VSACP CR  V L+
Sbjct: 126 LGGCGHVYHRKCIDSWLVRVSACPLCRRCVRLD 158


>dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana]
          Length = 173

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 51/151 (33%), Positives = 69/151 (45%)
 Frame = +1

Query: 220 KLKPKFLSFFLQSIIMLCIITLFFLFLGIATVFIIHICIAGXXXXXXXXXXXXXXXFPFD 399
           K K + LS FL  +IM  I  LF + +GIA+V I+ + ++                    
Sbjct: 16  KPKTRILSLFLVGVIMFSIFFLFLVLIGIASVLILPLLLSSLHRHHRRRRRNR------- 68

Query: 400 YIDAEFNHSSSSGISEHDINKLTSYGYISVVKLLNCGATQEDCCAVCLDGFRENERFRIL 579
                    SS G+S   + KL  + +       +     E  C VC DGFR+ +  R L
Sbjct: 69  ------RQESSDGLSSRFVKKLPQFKFSEP----STYTRYESDCVVCFDGFRQGQWCRNL 118

Query: 580 PGCKHVFHVGCIDVWLMKVSACPTCRGVVEL 672
           PGC HVFH  C+D WL+K S CP CR  V L
Sbjct: 119 PGCGHVFHRKCVDTWLLKASTCPICRARVRL 149


>gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 181

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 51/151 (33%), Positives = 69/151 (45%)
 Frame = +1

Query: 220 KLKPKFLSFFLQSIIMLCIITLFFLFLGIATVFIIHICIAGXXXXXXXXXXXXXXXFPFD 399
           K K + LS FL  +IM  I  LF + +GIA+V I+ + ++                    
Sbjct: 24  KPKTRILSLFLVGVIMFSIFFLFLVLIGIASVLILPLLLSSLHRHHRRRRRNR------- 76

Query: 400 YIDAEFNHSSSSGISEHDINKLTSYGYISVVKLLNCGATQEDCCAVCLDGFRENERFRIL 579
                    SS G+S   + KL  + +       +     E  C VC DGFR+ +  R L
Sbjct: 77  ------RQESSDGLSSRFVKKLPQFKFSEP----STYTRYESDCVVCFDGFRQGQWCRNL 126

Query: 580 PGCKHVFHVGCIDVWLMKVSACPTCRGVVEL 672
           PGC HVFH  C+D WL+K S CP CR  V L
Sbjct: 127 PGCGHVFHRKCVDTWLLKASTCPICRARVRL 157


>ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thaliana]
           gi|75339071|sp|Q9ZV51.1|ATL56_ARATH RecName:
           Full=RING-H2 finger protein ATL56
           gi|4185133|gb|AAD08936.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|15450663|gb|AAK96603.1| At2g18670/MSF3.5 [Arabidopsis
           thaliana] gi|20466087|gb|AAM19965.1| At2g18670/MSF3.5
           [Arabidopsis thaliana] gi|66865918|gb|AAY57593.1| RING
           finger family protein [Arabidopsis thaliana]
           gi|330251697|gb|AEC06791.1| RING-H2 finger protein ATL56
           [Arabidopsis thaliana]
          Length = 181

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 51/151 (33%), Positives = 69/151 (45%)
 Frame = +1

Query: 220 KLKPKFLSFFLQSIIMLCIITLFFLFLGIATVFIIHICIAGXXXXXXXXXXXXXXXFPFD 399
           K K + LS FL  +IM  I  LF + +GIA+V I+ + ++                    
Sbjct: 24  KPKTRILSLFLVGVIMFSIFFLFLVLIGIASVLILPLLLSSLHRHHRRRRRNR------- 76

Query: 400 YIDAEFNHSSSSGISEHDINKLTSYGYISVVKLLNCGATQEDCCAVCLDGFRENERFRIL 579
                    SS G+S   + KL  + +       +     E  C VC DGFR+ +  R L
Sbjct: 77  ------RQESSDGLSSRFVKKLPQFKFSEP----STYTRYESDCVVCFDGFRQGQWCRNL 126

Query: 580 PGCKHVFHVGCIDVWLMKVSACPTCRGVVEL 672
           PGC HVFH  C+D WL+K S CP CR  V L
Sbjct: 127 PGCGHVFHRKCVDTWLLKASTCPICRARVRL 157


>ref|XP_002884149.1| hypothetical protein ARALYDRAFT_900256 [Arabidopsis lyrata subsp.
           lyrata] gi|297329989|gb|EFH60408.1| hypothetical protein
           ARALYDRAFT_900256 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 51/151 (33%), Positives = 68/151 (45%)
 Frame = +1

Query: 220 KLKPKFLSFFLQSIIMLCIITLFFLFLGIATVFIIHICIAGXXXXXXXXXXXXXXXFPFD 399
           K K + LS FL  +IM  I  LF + +GIA+V I+ + ++                    
Sbjct: 24  KPKTRILSVFLVGLIMFSIFFLFLVLIGIASVLILPLLLSSLHRHHRRRRRNR------- 76

Query: 400 YIDAEFNHSSSSGISEHDINKLTSYGYISVVKLLNCGATQEDCCAVCLDGFRENERFRIL 579
                    SS G+S   + KL  + +             E  C VC DGFR+ +  R L
Sbjct: 77  ------RQESSDGLSSRFVKKLPQFKFSEPTTYTR----YESDCVVCFDGFRQGQWCRNL 126

Query: 580 PGCKHVFHVGCIDVWLMKVSACPTCRGVVEL 672
           PGC HVFH  C+D WL+K S CP CR  V L
Sbjct: 127 PGCGHVFHRKCVDTWLLKSSTCPICRARVRL 157