BLASTX nr result

ID: Coptis24_contig00010869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010869
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273485.1| PREDICTED: uncharacterized protein LOC100242...   254   3e-65
ref|XP_002328100.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_003545485.1| PREDICTED: uncharacterized protein LOC100800...   233   8e-59
ref|XP_003617084.1| Avr9/Cf-9 rapidly elicited protein [Medicago...   231   3e-58
gb|AFK38883.1| unknown [Medicago truncatula]                          228   3e-57

>ref|XP_002273485.1| PREDICTED: uncharacterized protein LOC100242686 [Vitis vinifera]
           gi|296083968|emb|CBI24356.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  254 bits (648), Expect = 3e-65
 Identities = 139/269 (51%), Positives = 171/269 (63%), Gaps = 9/269 (3%)
 Frame = +3

Query: 60  MADRVHPK-DSPTATSPVHGEEQPVSVHQTKHSP--PPGTYVVNLPKDQIYRYPPPPTRH 230
           MADRVHPK  SP ATSP   +    S   T  +P  P GTYV+ +PKDQI+R+PPP    
Sbjct: 1   MADRVHPKASSPDATSPRPPQSPSNSNPPTPENPVPPAGTYVIQIPKDQIFRHPPPENAR 60

Query: 231 NNQKPT----RRNHCCCCLYWXXXXXXXXXXXXXXXXGVFYLVYHPKAPKYSVDRLSIQG 398
             QK +    RR+ CCCCL W                G+FYLV  PKA  YSV+ +SI G
Sbjct: 61  RYQKYSGRKPRRSGCCCCLCWFLGLAALLIFLLAIAAGIFYLVIRPKALSYSVEDISITG 120

Query: 399 FNLTSADQL--ISPKMVVTVKARNPNKKIGIYYNKGSSISVSHSDDINPLCKGVLPVFHQ 572
           FN++SA     ISP+  VTV+A NPNKKI IYY + SS+ V +SD    LC GVLPVF+Q
Sbjct: 121 FNVSSAAATASISPEFDVTVRADNPNKKISIYYEEDSSVKVYYSDV--DLCNGVLPVFYQ 178

Query: 573 PTNNVTVFQTVLTGSDTNLSAADYEAFRDQQKKGEIPLKLDLKVPVKIKVGSLKTWTISV 752
           P  NVTVFQT L GS   L++   E   +QQ++G IPLKL LK PVKI+VGS+KTWTI+V
Sbjct: 179 PPKNVTVFQTALNGSGVVLTSGMKETLVNQQREGNIPLKLKLKAPVKIRVGSVKTWTITV 238

Query: 753 KVRCQITVDKLAVDASILSNKCDVDVKPW 839
           KV C +TVDKL  ++ I+S  CD  V+ W
Sbjct: 239 KVSCDLTVDKLTAESKIVSKDCDFSVRLW 267


>ref|XP_002328100.1| predicted protein [Populus trichocarpa] gi|222837615|gb|EEE75980.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  244 bits (622), Expect = 3e-62
 Identities = 133/276 (48%), Positives = 167/276 (60%), Gaps = 16/276 (5%)
 Frame = +3

Query: 60  MADRVHPKD-SPTATSP-------VHGEEQPVSVHQTKHS----PPPGTYVVNLPKDQIY 203
           MADRVHP+D SP  T+         H  E P      +      PPPGTYV+ +PKDQ+Y
Sbjct: 1   MADRVHPRDDSPPQTTEFKPPPAAAHYPESPTKPDAPRSEKPVPPPPGTYVIQIPKDQVY 60

Query: 204 RYPPPPTRHNNQKPTRR----NHCCCCLYWXXXXXXXXXXXXXXXXGVFYLVYHPKAPKY 371
           R PPP     +++ TRR    + CCCCL W                 VFY V+ P++P Y
Sbjct: 61  RVPPPENAKRHERLTRRKPSRSPCCCCLCWLLALLTALIFLVGVAAAVFYFVFRPESPDY 120

Query: 372 SVDRLSIQGFNLTSADQLISPKMVVTVKARNPNKKIGIYYNKGSSISVSHSDDINPLCKG 551
           SV+RLSI GFNLTS+ + +SP+  VTV+A NPN KIGIYY +GSS+ V +  D   L  G
Sbjct: 121 SVERLSISGFNLTSS-RWVSPEFDVTVRANNPNDKIGIYYRRGSSVDVYY--DSVKLATG 177

Query: 552 VLPVFHQPTNNVTVFQTVLTGSDTNLSAADYEAFRDQQKKGEIPLKLDLKVPVKIKVGSL 731
            LP+F+Q TNNVTVF T L GS   L++ D  A  D+  KG++P KL L+ PVKIKVGS+
Sbjct: 178 SLPIFYQGTNNVTVFVTPLKGSAVELTSGDRTAMIDEVGKGQVPFKLALRAPVKIKVGSV 237

Query: 732 KTWTISVKVRCQITVDKLAVDASILSNKCDVDVKPW 839
           +TW I+VKV C +TVDKL   A I S KCD  V  W
Sbjct: 238 ETWEITVKVDCDLTVDKLTATAEIGSKKCDYGVDLW 273


>ref|XP_003545485.1| PREDICTED: uncharacterized protein LOC100800674 isoform 1 [Glycine
           max] gi|356554301|ref|XP_003545486.1| PREDICTED:
           uncharacterized protein LOC100800674 isoform 2 [Glycine
           max]
          Length = 273

 Score =  233 bits (593), Expect = 8e-59
 Identities = 124/279 (44%), Positives = 158/279 (56%), Gaps = 19/279 (6%)
 Frame = +3

Query: 60  MADRVHPKDSPTATSPVHGEEQPVSVHQT-------------KHSPPPGTYVVNLPKDQI 200
           MADRVHP  SP+    V  + QP S   +             K  PPPGTYV+ +PKDQ+
Sbjct: 1   MADRVHPSHSPS----VSADSQPPSPQDSSVVPKPPSPPSPEKPVPPPGTYVIKIPKDQV 56

Query: 201 YRYPPPPTRHNNQKPTRRNH----CCCCLYWXXXXXXXXXXXXXXXXGVFYLVYHPKAPK 368
           YR PPP       +  RR H    CCCC  W                GV YLV+ P+APK
Sbjct: 57  YRVPPPENARRYDQYARRKHRRSRCCCCFCWLIGILFILVVLLAIAAGVLYLVFRPEAPK 116

Query: 369 YSVDRLSIQGFNLTSADQL--ISPKMVVTVKARNPNKKIGIYYNKGSSISVSHSDDINPL 542
           YS++ ++++G NLTS   +  ISP+  VTVKA NPN KIGI Y K SS  V + D    L
Sbjct: 117 YSIENITVRGINLTSPSSVAAISPEFNVTVKADNPNDKIGIRYLKDSSAEVFYKDA--RL 174

Query: 543 CKGVLPVFHQPTNNVTVFQTVLTGSDTNLSAADYEAFRDQQKKGEIPLKLDLKVPVKIKV 722
           C G LP F+QP+NNVTVF T L G    L + D  A  + Q K  +PL + ++ PVKIKV
Sbjct: 175 CNGALPAFYQPSNNVTVFGTALRGDGIELRSEDRRALLEAQTKRRVPLTVRIRAPVKIKV 234

Query: 723 GSLKTWTISVKVRCQITVDKLAVDASILSNKCDVDVKPW 839
           GS++TW I+VKV C +TV++L   A I+S +C  DV  W
Sbjct: 235 GSIRTWKITVKVNCDVTVNELTAQAKIVSKRCSYDVDLW 273


>ref|XP_003617084.1| Avr9/Cf-9 rapidly elicited protein [Medicago truncatula]
           gi|355518419|gb|AET00043.1| Avr9/Cf-9 rapidly elicited
           protein [Medicago truncatula]
          Length = 255

 Score =  231 bits (588), Expect = 3e-58
 Identities = 123/266 (46%), Positives = 160/266 (60%), Gaps = 6/266 (2%)
 Frame = +3

Query: 60  MADRVHPKDSPTATSPVHGEEQPVSVHQTKHSPPPGTYVVNLPKDQIYRYPPPPTRHNNQ 239
           MADRVHP+DSP   SP    ++PV        PPPGTYV+ +PKD ++R PPP      +
Sbjct: 1   MADRVHPRDSPPV-SPKPPLDKPV--------PPPGTYVIKIPKDIVHRVPPPENARRYE 51

Query: 240 KPTR----RNHCCCCLYWXXXXXXXXXXXXXXXXGVFYLVYHPKAPKYSVDRLSIQGFNL 407
           + TR    RN  CCCL W                G+FYLV+ PKAP Y+++ ++I+G N+
Sbjct: 52  QYTRKKHRRNRHCCCLCWFIGIIFILIALLGIAAGIFYLVFRPKAPNYTIENITIRGINI 111

Query: 408 TSADQL--ISPKMVVTVKARNPNKKIGIYYNKGSSISVSHSDDINPLCKGVLPVFHQPTN 581
           TS      ISP+  VTVKA NPN KIGI Y K SS  + + D    LC G+LP F+QP+N
Sbjct: 112 TSPSSTTGISPEFDVTVKADNPNDKIGISYEKDSSAEIFYKD--MRLCNGILPSFYQPSN 169

Query: 582 NVTVFQTVLTGSDTNLSAADYEAFRDQQKKGEIPLKLDLKVPVKIKVGSLKTWTISVKVR 761
           NVTVF+T+L G+   +S+ D  A    Q K E+ L + L+ PVKIKVGS+KTW I+VKV 
Sbjct: 170 NVTVFKTMLKGNGVKMSSEDQRALVKAQTKQEVQLMVKLRAPVKIKVGSVKTWKITVKVD 229

Query: 762 CQITVDKLAVDASILSNKCDVDVKPW 839
           C + VDKL  +A I+S  C   V  W
Sbjct: 230 CDLMVDKLTANAKIVSRSCTFRVDLW 255


>gb|AFK38883.1| unknown [Medicago truncatula]
          Length = 265

 Score =  228 bits (580), Expect = 3e-57
 Identities = 125/258 (48%), Positives = 156/258 (60%), Gaps = 5/258 (1%)
 Frame = +3

Query: 60  MADRVHPKDSPTATSPVHGEEQPVSVHQTKHSPPPGTYVVNLPKDQIYRYPPPPT--RHN 233
           MADRVHPK SP + S       P         PP GTYV+ LPKDQ YR PPP    R+ 
Sbjct: 1   MADRVHPKSSPPSKSNTVPSSSP---------PPSGTYVIQLPKDQTYRIPPPENAQRYA 51

Query: 234 N--QKPTRRNHCCCCLYWXXXXXXXXXXXXXXXXGVFYLVYHPKAPKYSVDRLSIQGFNL 407
           N  ++ +RR  CCCCL W                GVFYL+  P+APKY++DR+S++G NL
Sbjct: 52  NYTRRKSRRCGCCCCLCWFIGILFTLIVLMAIAAGVFYLIVRPEAPKYAIDRVSVKGMNL 111

Query: 408 TSADQLISPKMVVTVKARNPNKKIGIYYNKGSSISVSHSDDINPLCKGVLPVFHQPTNNV 587
           TS    ISP+  V+VKA N NKKIGIYY   SS+ + +      LCKGVLP F+QP+NNV
Sbjct: 112 TSLST-ISPEFDVSVKADNGNKKIGIYYESDSSVEMFYRGV--SLCKGVLPAFYQPSNNV 168

Query: 588 TVFQTVLTGSDTNLSAADYEAFRDQQKKGEIPLKLDLKVPVKIKVGSL-KTWTISVKVRC 764
           TVFQTVL G+   L  +D  A  +   KG +PL L L+ PVKI+VGS+ KTW + VKV C
Sbjct: 169 TVFQTVLKGNGIELVRSDQRALVNAVTKGSVPLTLKLRAPVKIRVGSVKKTWKVRVKVDC 228

Query: 765 QITVDKLAVDASILSNKC 818
            +TVD+L   A I+   C
Sbjct: 229 DLTVDQLTAQAKIVDRDC 246


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