BLASTX nr result

ID: Coptis24_contig00010866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010866
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...   160   1e-37
emb|CAN81505.1| hypothetical protein VITISV_005564 [Vitis vinifera]   160   1e-37
ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Rici...   155   4e-36
ref|XP_002327801.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_002310231.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35

>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +2

Query: 2   IRAVMVINTQGKPRLAKFYDFMPVEKQQELIRSVFVVLCSRAENLSNFVEADSIFGPDTR 181
           IRAV+V+NTQGKPRL KFYD+MP EKQQELIR VF VLCSRAEN+SNFVEADS+FGPDTR
Sbjct: 2   IRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDTR 61

Query: 182 LVYKHYATLYFVFVFDDSENELAMLDLI 265
           LVYKHYATLYFVFVFD SENELAMLDLI
Sbjct: 62  LVYKHYATLYFVFVFDSSENELAMLDLI 89


>emb|CAN81505.1| hypothetical protein VITISV_005564 [Vitis vinifera]
          Length = 151

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +2

Query: 2   IRAVMVINTQGKPRLAKFYDFMPVEKQQELIRSVFVVLCSRAENLSNFVEADSIFGPDTR 181
           IRAV+V+NTQGKPRL KFYD+MP EKQQELIR VF VLCSRAEN+SNFVEADS+FGPDTR
Sbjct: 2   IRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDTR 61

Query: 182 LVYKHYATLYFVFVFDDSENELAMLDLI 265
           LVYKHYATLYFVFVFD SENELAMLDLI
Sbjct: 62  LVYKHYATLYFVFVFDSSENELAMLDLI 89


>ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Ricinus communis]
           gi|223539270|gb|EEF40863.1| AP-3 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 166

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/88 (85%), Positives = 84/88 (95%)
 Frame = +2

Query: 2   IRAVMVINTQGKPRLAKFYDFMPVEKQQELIRSVFVVLCSRAENLSNFVEADSIFGPDTR 181
           I+AV+V+NTQGKPRLAKFYDF+ VEKQQELIRSVF VLCSRAEN+SNF+EADSIFGPD+R
Sbjct: 2   IKAVLVMNTQGKPRLAKFYDFLSVEKQQELIRSVFGVLCSRAENVSNFMEADSIFGPDSR 61

Query: 182 LVYKHYATLYFVFVFDDSENELAMLDLI 265
           LVYKHYATLYFVFV+D  ENELA+LDLI
Sbjct: 62  LVYKHYATLYFVFVYDSCENELAVLDLI 89


>ref|XP_002327801.1| predicted protein [Populus trichocarpa] gi|222836886|gb|EEE75279.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/88 (85%), Positives = 83/88 (94%)
 Frame = +2

Query: 2   IRAVMVINTQGKPRLAKFYDFMPVEKQQELIRSVFVVLCSRAENLSNFVEADSIFGPDTR 181
           I+AV++INTQGKPRL KFYDF+ VEKQQELIRSVF VLCSRA+N+SNF+EADSIFGP +R
Sbjct: 2   IKAVLIINTQGKPRLTKFYDFLTVEKQQELIRSVFGVLCSRADNVSNFMEADSIFGPGSR 61

Query: 182 LVYKHYATLYFVFVFDDSENELAMLDLI 265
           LVYKHYATLYFVFVFD SENELAMLDLI
Sbjct: 62  LVYKHYATLYFVFVFDSSENELAMLDLI 89


>ref|XP_002310231.1| predicted protein [Populus trichocarpa] gi|222853134|gb|EEE90681.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/88 (84%), Positives = 81/88 (92%)
 Frame = +2

Query: 2   IRAVMVINTQGKPRLAKFYDFMPVEKQQELIRSVFVVLCSRAENLSNFVEADSIFGPDTR 181
           I+AV+VINTQGKPRL KFYDF+ VEKQQELIR VF VLC+RAE +SNF+E DSIFGPD+R
Sbjct: 2   IKAVLVINTQGKPRLTKFYDFLTVEKQQELIRGVFGVLCTRAEKVSNFMEVDSIFGPDSR 61

Query: 182 LVYKHYATLYFVFVFDDSENELAMLDLI 265
           LVYKHYATLYFVFVFD SENELAMLDLI
Sbjct: 62  LVYKHYATLYFVFVFDSSENELAMLDLI 89


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