BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010861
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24211.3| unnamed protein product [Vitis vinifera]              453   e-125
ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxido...   452   e-124
ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersi...   441   e-121
ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, ...   429   e-118
ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117

>emb|CBI24211.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  453 bits (1165), Expect = e-125
 Identities = 219/336 (65%), Positives = 270/336 (80%), Gaps = 13/336 (3%)
 Frame = -1

Query: 1160 LSKKASMETLLFQSFPSFGLKMEPSTLPKKRSS-------------MKITSFSYKKFVQF 1020
            L +  S  TL F S  S  L    STL +  S+             +++++ SY+KF+ F
Sbjct: 44   LGRTLSRGTLCFSSMESSSLSFF-STLKRPLSTGSNINNFKPKGALVEVSACSYQKFLHF 102

Query: 1019 ALEETQKHTHLVPSPLQEQYSCMKSMDGKSELEMLSFQAPKIRYLRSLSIEGSEAMKVLD 840
            AL+ET++ THL+PSPLQE ++ M +MDGK++L+M+SFQAPKIR LR+LSIE SE M++LD
Sbjct: 103  ALDETKRRTHLLPSPLQENFNSMMAMDGKAKLQMVSFQAPKIRLLRNLSIEASEGMQILD 162

Query: 839  FAVFPEPELDLPIFCANFFTAGSMNIIVLDLNPLHDVIIQKDYREKYYRSLMPLGLKYTE 660
            FAVFPE E DLPIFCANFFT  + NIIVLDLNPLHDVI ++DY+EKYY+SLMPLGLKY E
Sbjct: 163  FAVFPEQEFDLPIFCANFFTTPTTNIIVLDLNPLHDVINRRDYKEKYYKSLMPLGLKYAE 222

Query: 659  LLPWGGKLTSESLRFFSPIVIWTKFTSCEHNHESLFSAFMDYYKAWLELMDQAREEKDDS 480
            LLPWGGKLTSESLRFFSPIVIWTKFTS ++ H  L+SAFMDYYKAWLELM+QA EE+D S
Sbjct: 223  LLPWGGKLTSESLRFFSPIVIWTKFTSSQYKHGVLYSAFMDYYKAWLELMEQAAEERDTS 282

Query: 479  RILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNFLFNGINTLGSKAFLDYFP 300
            +I+ N EAQH+YLTWRAEKDPGH++LKKL+GE ++KD+V +FLFNG++ LG+K FLDYFP
Sbjct: 283  QIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSFLFNGVDELGTKTFLDYFP 342

Query: 299  EYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDDP 192
            EY CE+G IN KRS+IGKSF+SRPWD  GEF+G  P
Sbjct: 343  EYCCENGTINDKRSIIGKSFESRPWDTSGEFIGSLP 378


>ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxidoreductase,
            chloroplastic-like [Vitis vinifera]
          Length = 330

 Score =  452 bits (1162), Expect = e-124
 Identities = 208/294 (70%), Positives = 257/294 (87%)
 Frame = -1

Query: 1073 KRSSMKITSFSYKKFVQFALEETQKHTHLVPSPLQEQYSCMKSMDGKSELEMLSFQAPKI 894
            K + +++++ SY+KF+ FAL+ET++ THL+PSPLQE ++ M +MDGK++L+M+SFQAPKI
Sbjct: 28   KGALVEVSACSYQKFLHFALDETKRRTHLLPSPLQENFNSMMAMDGKAKLQMVSFQAPKI 87

Query: 893  RYLRSLSIEGSEAMKVLDFAVFPEPELDLPIFCANFFTAGSMNIIVLDLNPLHDVIIQKD 714
            R LR+LSIE SE M++LDFAVFPE E DLPIFCANFFT  + NIIVLDLNPLHDVI ++D
Sbjct: 88   RLLRNLSIEASEGMQILDFAVFPEQEFDLPIFCANFFTTPTTNIIVLDLNPLHDVINRRD 147

Query: 713  YREKYYRSLMPLGLKYTELLPWGGKLTSESLRFFSPIVIWTKFTSCEHNHESLFSAFMDY 534
            Y+EKYY+SLMPLGLKY ELLPWGGKLTSESLRFFSPIVIWTKFTS ++ H  L+SAFMDY
Sbjct: 148  YKEKYYKSLMPLGLKYAELLPWGGKLTSESLRFFSPIVIWTKFTSSQYKHGVLYSAFMDY 207

Query: 533  YKAWLELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNF 354
            YKAWLELM+QA EE+D S+I+ N EAQH+YLTWRAEKDPGH++LKKL+GE ++KD+V +F
Sbjct: 208  YKAWLELMEQAAEERDTSQIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSF 267

Query: 353  LFNGINTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDDP 192
            LFNG++ LG+K FLDYFPEY CE+G IN KRS+IGKSF+SRPWD  GEF+G  P
Sbjct: 268  LFNGVDELGTKTFLDYFPEYCCENGTINDKRSIIGKSFESRPWDTSGEFIGSLP 321


>ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersicum]
            gi|62149356|dbj|BAD93478.1| phytochromobilin synthase
            [Solanum lycopersicum] gi|62149358|dbj|BAD93479.1|
            phytochromobilin synthase [Solanum lycopersicum]
          Length = 342

 Score =  441 bits (1135), Expect = e-121
 Identities = 211/320 (65%), Positives = 256/320 (80%)
 Frame = -1

Query: 1157 SKKASMETLLFQSFPSFGLKMEPSTLPKKRSSMKITSFSYKKFVQFALEETQKHTHLVPS 978
            SKK    +   +SF   G K    +  +  SS      SYKK + FALEET  HT L PS
Sbjct: 22   SKKKYSLSRKCRSFNEVGSKCVRMSYTENESS----GVSYKKLIHFALEETNTHTLLSPS 77

Query: 977  PLQEQYSCMKSMDGKSELEMLSFQAPKIRYLRSLSIEGSEAMKVLDFAVFPEPELDLPIF 798
            PLQE+YS + SMD K+EL+MLSF+A KIR LRSL IEG++ M+VLDFA FP+PE DLPIF
Sbjct: 78   PLQEKYSSLLSMDDKTELQMLSFEAHKIRLLRSLCIEGTDGMQVLDFAAFPKPEFDLPIF 137

Query: 797  CANFFTAGSMNIIVLDLNPLHDVIIQKDYREKYYRSLMPLGLKYTELLPWGGKLTSESLR 618
            CANFFT   MNIIVLDLNPLHD++ Q+DY+EKYY+ L+ LGLKY++LLPWGGKLTSESLR
Sbjct: 138  CANFFTTAKMNIIVLDLNPLHDIMDQEDYKEKYYKDLITLGLKYSKLLPWGGKLTSESLR 197

Query: 617  FFSPIVIWTKFTSCEHNHESLFSAFMDYYKAWLELMDQAREEKDDSRILLNCEAQHKYLT 438
            FFSPIVIWT+F+S  HNH  LFSAF DYY+AWL LMD++  E D S+I  NCEAQH+YLT
Sbjct: 198  FFSPIVIWTRFSSSPHNHSVLFSAFKDYYQAWLGLMDRSEGETDASQIACNCEAQHRYLT 257

Query: 437  WRAEKDPGHQVLKKLVGEIVAKDIVSNFLFNGINTLGSKAFLDYFPEYRCEDGKINQKRS 258
            WR+EKDPGH VLK+L+GE +AKD+++ FLFNG+N LG+K FLDYFPEYRCEDGK+N+KRS
Sbjct: 258  WRSEKDPGHGVLKRLIGEDLAKDVITKFLFNGVNELGNKTFLDYFPEYRCEDGKVNEKRS 317

Query: 257  VIGKSFQSRPWDAGGEFVGD 198
            +IGKSF++RPW+A GEF+GD
Sbjct: 318  MIGKSFENRPWNARGEFIGD 337


>ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor,
            putative [Ricinus communis] gi|223544210|gb|EEF45734.1|
            Phytochromobilin:ferredoxin oxidoreductase, chloroplast
            precursor, putative [Ricinus communis]
          Length = 330

 Score =  429 bits (1104), Expect = e-118
 Identities = 199/289 (68%), Positives = 249/289 (86%)
 Frame = -1

Query: 1061 MKITSFSYKKFVQFALEETQKHTHLVPSPLQEQYSCMKSMDGKSELEMLSFQAPKIRYLR 882
            +++++ SY+KF+ FA+ ET++HT LVPSPLQE+YS M ++D ++EL+M SFQ+PKIR LR
Sbjct: 40   LQVSAHSYQKFIHFAVSETKRHTSLVPSPLQEKYSSMTAVDCRTELKMQSFQSPKIRLLR 99

Query: 881  SLSIEGSEAMKVLDFAVFPEPELDLPIFCANFFTAGSMNIIVLDLNPLHDVIIQKDYREK 702
            +L+IE +EAM+VLDF V P PE D+PIFCANFFTA SMNIIVLDLNPLH+VI + DY+EK
Sbjct: 100  TLNIE-NEAMQVLDFTVLPRPEFDVPIFCANFFTAASMNIIVLDLNPLHNVIDRSDYKEK 158

Query: 701  YYRSLMPLGLKYTELLPWGGKLTSESLRFFSPIVIWTKFTSCEHNHESLFSAFMDYYKAW 522
            YY+SL+ +GLKY EL PWGGKLTSESL+FFSPIV+WTKFTS +  H+ L+SAF DYYK W
Sbjct: 159  YYKSLLTVGLKYVELFPWGGKLTSESLQFFSPIVLWTKFTSSQSKHDDLYSAFADYYKVW 218

Query: 521  LELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNFLFNG 342
            L+L++QA EE D S+I+ N EAQHKYLTWRAEKDPGH VLKKL+GE +AKD+V NFLFNG
Sbjct: 219  LQLIEQAVEETDISQIICNREAQHKYLTWRAEKDPGHGVLKKLIGESLAKDLVRNFLFNG 278

Query: 341  INTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDD 195
            ++ LGSK FLDYFP+YRC+DG IN+KRSVIGKSF+ RPWD  GEF+G++
Sbjct: 279  LDELGSKGFLDYFPQYRCKDGNINEKRSVIGKSFEMRPWDINGEFIGNN 327


>ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|222849776|gb|EEE87323.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  426 bits (1094), Expect = e-117
 Identities = 202/293 (68%), Positives = 245/293 (83%)
 Frame = -1

Query: 1079 PKKRSSMKITSFSYKKFVQFALEETQKHTHLVPSPLQEQYSCMKSMDGKSELEMLSFQAP 900
            P +   +   SFSY KF+ FAL ET++H  LVPSPLQE+YS M +MDG +EL+MLSFQAP
Sbjct: 9    PHRVLKVSAGSFSYHKFIHFALNETKRHALLVPSPLQEKYSSMTAMDGTTELQMLSFQAP 68

Query: 899  KIRYLRSLSIEGSEAMKVLDFAVFPEPELDLPIFCANFFTAGSMNIIVLDLNPLHDVIIQ 720
            KIR LRSLSIE +EAM++LDFAVF  PE D+PIFCANFF+  ++NIIVLDLNPLH+VI Q
Sbjct: 69   KIRLLRSLSIE-NEAMQILDFAVFARPEFDVPIFCANFFSTATINIIVLDLNPLHNVIDQ 127

Query: 719  KDYREKYYRSLMPLGLKYTELLPWGGKLTSESLRFFSPIVIWTKFTSCEHNHESLFSAFM 540
            +DY+EKY++ L+PLGLKY +L PWGGKLTSESL+FFSPIVIWTKF   + ++++L+SAF 
Sbjct: 128  RDYKEKYFKRLIPLGLKYCKLFPWGGKLTSESLKFFSPIVIWTKFPPSQDSYDALYSAFT 187

Query: 539  DYYKAWLELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVS 360
            +YYKAWLEL+DQA EE D S I  N EAQHKYLTWR EKDPGH +LK+L+GE +AKD+V 
Sbjct: 188  EYYKAWLELIDQAPEEIDASHITFNREAQHKYLTWREEKDPGHGILKRLIGERLAKDLVR 247

Query: 359  NFLFNGINTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVG 201
            NFLFNG++ LGSK FLDYFPEYR EDG IN+KRS+IGKSF+ RPWDA GEF+G
Sbjct: 248  NFLFNGLDELGSKGFLDYFPEYRREDGSINEKRSIIGKSFEKRPWDARGEFIG 300